RNA–Protein interactions for RNA: ENST00000432645.6

HDAC9-212, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-212ENST00000432645 SEPT11Q9NVA2 429 aaKnown RBP9.02□□□□□ -0.97
HDAC9-212ENST00000432645 APEX2Q9UBZ4 518 aa9.02□□□□□ -0.97
HDAC9-212ENST00000432645 NAGPAQ9UK23 515 aa9.02□□□□□ -0.97
HDAC9-212ENST00000432645 SNX12Q9UMY4 172 aa9.02□□□□□ -0.97
HDAC9-212ENST00000432645 NFASCO94856 1347 aa9.02□□□□□ -0.97
HDAC9-212ENST00000432645 ANO9A1A5B4 782 aa9.02□□□□□ -0.97
HDAC9-212ENST00000432645 HNRNPDLO14979 420 aaKnown RBP9.02□□□□□ -0.97
HDAC9-212ENST00000432645 STAM2O75886 525 aa9.02□□□□□ -0.97
HDAC9-212ENST00000432645 DGAT1O75907 488 aa9.02□□□□□ -0.97
HDAC9-212ENST00000432645 ZRANB2O95218 330 aaKnown RBP eCLIP9.02□□□□□ -0.97
HDAC9-212ENST00000432645 MATR3P43243 847 aaKnown RBP eCLIP9.02□□□□□ -0.97
HDAC9-212ENST00000432645 MRPS25P82663 173 aaKnown RBP9.02□□□□□ -0.97
HDAC9-212ENST00000432645 MKRN3Q13064 507 aaKnown RBP9.02□□□□□ -0.97
HDAC9-212ENST00000432645 SNRNP35Q16560 246 aaKnown RBP9.02□□□□□ -0.97
HDAC9-212ENST00000432645 C1orf220Q5T0J3 134 aa9.02□□□□□ -0.97
HDAC9-212ENST00000432645 GLYCTKQ8IVS8 523 aa9.02□□□□□ -0.97
HDAC9-212ENST00000432645 C10orf67Q8IYJ2 551 aa9.02□□□□□ -0.97
HDAC9-212ENST00000432645 KCNV2Q8TDN2 545 aa9.02□□□□□ -0.97
HDAC9-212ENST00000432645 KIFAP3Q92845 792 aa9.02□□□□□ -0.97
HDAC9-212ENST00000432645 CEP89Q96ST8 783 aa9.02□□□□□ -0.97
HDAC9-212ENST00000432645 TIPINQ9BVW5 301 aa9.02□□□□□ -0.97
HDAC9-212ENST00000432645 FOXN3O00409 490 aaPredicted RBP9.01□□□□□ -0.97
HDAC9-212ENST00000432645 PPFIA2O75334 1257 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 ZMYND10O75800 440 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 DLATP10515 647 aaKnown RBP9.01□□□□□ -0.97
HDAC9-212ENST00000432645 MARK3P27448 753 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 USP8P40818 1118 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 ADCY2Q08462 1091 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 C2orf54Q08AI8 447 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 FOXD4Q12950 439 aaPredicted RBP9.01□□□□□ -0.97
HDAC9-212ENST00000432645 NAB2Q15742 525 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 CC2D1AQ6P1N0 951 aaPredicted RBP9.01□□□□□ -0.97
HDAC9-212ENST00000432645 SLC39A4Q6P5W5 647 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 IFNLR1Q8IU57 520 aaPredicted RBP9.01□□□□□ -0.97
HDAC9-212ENST00000432645 MAP4K3Q8IVH8 894 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 ARHGEF19Q8IW93 802 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 U2AF1L4Q8WU68 220 aaKnown RBP9.01□□□□□ -0.97
HDAC9-212ENST00000432645 OSBPL9Q96SU4 736 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 STK33Q9BYT3 514 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 GPR88Q9GZN0 384 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 ATP6V0A4Q9HBG4 840 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 TOPORSQ9NS56 1045 aaPredicted RBP9.01□□□□□ -0.97
HDAC9-212ENST00000432645 FBXO40Q9UH90 709 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 BZW2Q9Y6E2 419 aaKnown RBP9.01□□□□□ -0.97
HDAC9-212ENST00000432645 KIAA1217Q5T5P2 1943 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 SYNGAP1Q96PV0 1343 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 SPDYE5A6NIY4 337 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 DDX3XO00571 662 aaKnown RBP eCLIP9.01□□□□□ -0.97
HDAC9-212ENST00000432645 DKC1O60832 514 aaKnown RBP eCLIP9.01□□□□□ -0.97
HDAC9-212ENST00000432645 CNMDO75829 334 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 SOX5P35711 763 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 RNASE9P60153 205 aaKnown RBP9.01□□□□□ -0.97
HDAC9-212ENST00000432645 VSNL1P62760 191 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 XKR3Q5GH77 459 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 APBB1IPQ7Z5R6 666 aaPredicted RBP9.01□□□□□ -0.97
HDAC9-212ENST00000432645 TRIM74Q86UV6 250 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 TRIM73Q86UV7 250 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 CREG2Q8IUH2 290 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 MCPH1Q8NEM0 835 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 LMO3Q8TAP4 145 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 KAT5Q92993 513 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 MS4A14Q96JA4 679 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 IFT74Q96LB3 600 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 TLR10Q9BXR5 811 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 ST6GALNAC4Q9H4F1 302 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 SUGCTQ9HAC7 445 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 RBPJLQ9UBG7 517 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 FBXL5Q9UKA1 691 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 EXOC7Q9UPT5 735 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 TRIM66O15016 1216 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 TPD52L2O43399 206 aaKnown RBP9.01□□□□□ -0.97
HDAC9-212ENST00000432645 GGPS1O95749 300 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 TBC1D8O95759 1140 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 POTEJP0CG39 1038 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 CYP2C8P10632 490 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 NAT1P18440 290 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 PRKCIP41743 596 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 MXI1P50539 228 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 CETN1Q12798 172 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 EMC2Q15006 297 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 TTC31Q49AM3 519 aaPredicted RBP9.01□□□□□ -0.97
HDAC9-212ENST00000432645 TXLNBQ8N3L3 684 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 FAM213AQ9BRX8 229 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 TMEM117Q9H0C3 514 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 ARFGAP3Q9NP61 516 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 ACP6Q9NPH0 428 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 PDLIM7Q9NR12 457 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 AGTPBP1Q9UPW5 1226 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 CLEC11AQ9Y240 323 aa9.01□□□□□ -0.97
HDAC9-212ENST00000432645 DICER1Q9UPY3 1922 aaKnown RBP9.01□□□□□ -0.97
HDAC9-212ENST00000432645 LRRIQ4A6NIV6 560 aa9□□□□□ -0.97
HDAC9-212ENST00000432645 FARP2O94887 1054 aaPredicted RBP9□□□□□ -0.97
HDAC9-212ENST00000432645 ARIH2O95376 493 aa9□□□□□ -0.97
HDAC9-212ENST00000432645 OATP04181 439 aa9□□□□□ -0.97
HDAC9-212ENST00000432645 FERP16591 822 aa9□□□□□ -0.97
HDAC9-212ENST00000432645 ABCB4P21439 1286 aa9□□□□□ -0.97
HDAC9-212ENST00000432645 OAS2P29728 719 aaKnown RBP9□□□□□ -0.97
HDAC9-212ENST00000432645 TMEM63BQ5T3F8 832 aa9□□□□□ -0.97
HDAC9-212ENST00000432645 LMBRD2Q68DH5 695 aaPredicted RBP9□□□□□ -0.97
HDAC9-212ENST00000432645 TAS1R3Q7RTX0 852 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms