RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 TMX1Q9H3N1 280 aa4.7□□□□□ -1.66
CLK1-204ENST00000432425 EDARQ9UNE0 448 aa4.7□□□□□ -1.66
CLK1-204ENST00000432425 HDAC5Q9UQL6 1122 aa4.7□□□□□ -1.66
CLK1-204ENST00000432425 REXO2Q9Y3B8 237 aaKnown RBP4.7□□□□□ -1.66
CLK1-204ENST00000432425 KLRG2A4D1S0 409 aaPredicted RBP4.69□□□□□ -1.66
CLK1-204ENST00000432425 GOLGA8AA7E2F4 631 aa4.69□□□□□ -1.66
CLK1-204ENST00000432425 GZMKP49863 264 aa4.69□□□□□ -1.66
CLK1-204ENST00000432425 RABGGTBP53611 331 aa4.69□□□□□ -1.66
CLK1-204ENST00000432425 MRPL49Q13405 166 aaKnown RBP4.69□□□□□ -1.66
CLK1-204ENST00000432425 FAM83AQ86UY5 434 aa4.69□□□□□ -1.66
CLK1-204ENST00000432425 GLB1L3Q8NCI6 653 aaPredicted RBP4.69□□□□□ -1.66
CLK1-204ENST00000432425 ZNF483Q8TF39 744 aaPredicted RBP4.69□□□□□ -1.66
CLK1-204ENST00000432425 DPP7Q9UHL4 492 aa4.69□□□□□ -1.66
CLK1-204ENST00000432425 XDHP47989 1333 aa4.69□□□□□ -1.66
CLK1-204ENST00000432425 DNAJC6O75061 913 aa4.68□□□□□ -1.66
CLK1-204ENST00000432425 PEX11BO96011 259 aa4.68□□□□□ -1.66
CLK1-204ENST00000432425 VIL1P09327 827 aaKnown RBP4.68□□□□□ -1.66
CLK1-204ENST00000432425 HK1P19367 917 aa4.68□□□□□ -1.66
CLK1-204ENST00000432425 C19orf54Q5BKX5 351 aa4.68□□□□□ -1.66
CLK1-204ENST00000432425 HTR3DQ70Z44 454 aa4.68□□□□□ -1.66
CLK1-204ENST00000432425 SNX33Q8WV41 574 aa4.68□□□□□ -1.66
CLK1-204ENST00000432425 AUTS2Q8WXX7 1259 aa4.68□□□□□ -1.66
CLK1-204ENST00000432425 PDCD2LQ9BRP1 358 aa4.68□□□□□ -1.66
CLK1-204ENST00000432425 QRSL1Q9H0R6 528 aaKnown RBP4.68□□□□□ -1.66
CLK1-204ENST00000432425 NARSO43776 548 aaKnown RBP4.67□□□□□ -1.66
CLK1-204ENST00000432425 TMEM127O75204 238 aa4.67□□□□□ -1.66
CLK1-204ENST00000432425 CFBP00751 764 aa4.67□□□□□ -1.66
CLK1-204ENST00000432425 SLPIP03973 132 aa4.67□□□□□ -1.66
CLK1-204ENST00000432425 ADH4P08319 380 aa4.67□□□□□ -1.66
CLK1-204ENST00000432425 HSP90B1P14625 803 aaKnown RBP4.67□□□□□ -1.66
CLK1-204ENST00000432425 MAKP20794 623 aa4.67□□□□□ -1.66
CLK1-204ENST00000432425 HMGA2P52926 109 aa4.67□□□□□ -1.66
CLK1-204ENST00000432425 SCAND1P57086 179 aa4.67□□□□□ -1.66
CLK1-204ENST00000432425 MRPS9P82933 396 aaKnown RBP4.67□□□□□ -1.66
CLK1-204ENST00000432425 CDK17Q00537 523 aa4.67□□□□□ -1.66
CLK1-204ENST00000432425 APBA1Q02410 837 aa4.67□□□□□ -1.66
CLK1-204ENST00000432425 KLF10Q13118 480 aa4.67□□□□□ -1.66
CLK1-204ENST00000432425 TOB2Q14106 344 aaPredicted RBP4.67□□□□□ -1.66
CLK1-204ENST00000432425 FHL2Q14192 279 aa4.67□□□□□ -1.66
CLK1-204ENST00000432425 SPATS2Q86XZ4 545 aaKnown RBP4.67□□□□□ -1.66
CLK1-204ENST00000432425 ATL2Q8NHH9 583 aa4.67□□□□□ -1.66
CLK1-204ENST00000432425 WDR66Q8TBY9 1149 aa4.67□□□□□ -1.66
CLK1-204ENST00000432425 TGFBRAP1Q8WUH2 860 aa4.67□□□□□ -1.66
CLK1-204ENST00000432425 ZNF480Q8WV37 535 aa4.67□□□□□ -1.66
CLK1-204ENST00000432425 PCED1AQ9H1Q7 454 aa4.67□□□□□ -1.66
CLK1-204ENST00000432425 MMRN2Q9H8L6 949 aa4.67□□□□□ -1.66
CLK1-204ENST00000432425 PRR5-ARHGAP8B1AHC4 643 aa4.67□□□□□ -1.66
CLK1-204ENST00000432425 GPR39O43194 453 aa4.67□□□□□ -1.66
CLK1-204ENST00000432425 FAM20BO75063 409 aa4.67□□□□□ -1.66
CLK1-204ENST00000432425 PHF2O75151 1096 aa4.67□□□□□ -1.66
CLK1-204ENST00000432425 EYA4O95677 639 aa4.67□□□□□ -1.66
CLK1-204ENST00000432425 MTHFD2P13995 350 aa4.67□□□□□ -1.66
CLK1-204ENST00000432425 CTSSP25774 331 aa4.67□□□□□ -1.66
CLK1-204ENST00000432425 RABL3Q5HYI8 236 aa4.67□□□□□ -1.66
CLK1-204ENST00000432425 C1QL3Q5VWW1 255 aa4.67□□□□□ -1.66
CLK1-204ENST00000432425 EGFLAMQ63HQ2 1017 aa4.67□□□□□ -1.66
CLK1-204ENST00000432425 NAIF1Q69YI7 327 aaPredicted RBP4.67□□□□□ -1.66
CLK1-204ENST00000432425 IGFL4Q6B9Z1 124 aa4.67□□□□□ -1.66
CLK1-204ENST00000432425 ABHD15Q6UXT9 468 aa4.67□□□□□ -1.66
CLK1-204ENST00000432425 PDZD4Q76G19 769 aaPredicted RBP4.67□□□□□ -1.66
CLK1-204ENST00000432425 DOK3Q7L591 496 aa4.67□□□□□ -1.66
CLK1-204ENST00000432425 LMBR1Q8WVP7 490 aa4.67□□□□□ -1.66
CLK1-204ENST00000432425 AHCYL2Q96HN2 611 aaKnown RBP4.67□□□□□ -1.66
CLK1-204ENST00000432425 FAM193BQ96PV7 902 aaPredicted RBP4.67□□□□□ -1.66
CLK1-204ENST00000432425 MRIQ9BWK5 157 aa4.67□□□□□ -1.66
CLK1-204ENST00000432425 ZBTB21Q9ULJ3 1066 aa4.67□□□□□ -1.66
CLK1-204ENST00000432425 CLCA2Q9UQC9 943 aa4.67□□□□□ -1.66
CLK1-204ENST00000432425 ITGA10O75578 1167 aa4.66□□□□□ -1.66
CLK1-204ENST00000432425 RPS6KA4O75676 772 aa4.66□□□□□ -1.66
CLK1-204ENST00000432425 RECQL4O94761 1208 aa4.66□□□□□ -1.66
CLK1-204ENST00000432425 CANXP27824 592 aaKnown RBP4.66□□□□□ -1.66
CLK1-204ENST00000432425 CCT2P78371 535 aaKnown RBP4.66□□□□□ -1.66
CLK1-204ENST00000432425 METTL24Q5JXM2 366 aa4.66□□□□□ -1.66
CLK1-204ENST00000432425 RNF219Q5W0B1 726 aaPredicted RBP4.66□□□□□ -1.66
CLK1-204ENST00000432425 FAM180AQ6UWF9 173 aa4.66□□□□□ -1.66
CLK1-204ENST00000432425 LHFPL2Q6ZUX7 228 aa4.66□□□□□ -1.66
CLK1-204ENST00000432425 CMIPQ8IY22 773 aa4.66□□□□□ -1.66
CLK1-204ENST00000432425 RPTORQ8N122 1335 aa4.66□□□□□ -1.66
CLK1-204ENST00000432425 OR52N2Q8NGI0 321 aa4.66□□□□□ -1.66
CLK1-204ENST00000432425 LSM14BQ9BX40 385 aaKnown RBP4.66□□□□□ -1.66
CLK1-204ENST00000432425 VTA1Q9NP79 307 aa4.66□□□□□ -1.66
CLK1-204ENST00000432425 SLC2A4RGQ9NR83 387 aa4.66□□□□□ -1.66
CLK1-204ENST00000432425 C14orf119Q9NWQ9 140 aa4.66□□□□□ -1.66
CLK1-204ENST00000432425 GPRC5DQ9NZD1 345 aa4.66□□□□□ -1.66
CLK1-204ENST00000432425 EIF2B4Q9UI10 523 aaKnown RBP4.66□□□□□ -1.66
CLK1-204ENST00000432425 WASHC2AQ641Q2 1341 aa4.65□□□□□ -1.66
CLK1-204ENST00000432425 AKR1B10O60218 316 aa4.65□□□□□ -1.66
CLK1-204ENST00000432425 IGSF3O75054 1194 aa4.65□□□□□ -1.66
CLK1-204ENST00000432425 GASTP01350 101 aa4.65□□□□□ -1.66
CLK1-204ENST00000432425 CRHR1P34998 444 aa4.65□□□□□ -1.66
CLK1-204ENST00000432425 PTGS2P35354 604 aa4.65□□□□□ -1.66
CLK1-204ENST00000432425 SLC25A3Q00325 362 aa4.65□□□□□ -1.66
CLK1-204ENST00000432425 VPS72Q15906 364 aa4.65□□□□□ -1.66
CLK1-204ENST00000432425 MUM1Q2TAK8 710 aa4.65□□□□□ -1.66
CLK1-204ENST00000432425 TOR2AQ5JU69 321 aa4.65□□□□□ -1.66
CLK1-204ENST00000432425 FNDC7Q5VTL7 733 aa4.65□□□□□ -1.66
CLK1-204ENST00000432425 BTNL9Q6UXG8 535 aa4.65□□□□□ -1.66
CLK1-204ENST00000432425 XYLT1Q86Y38 959 aa4.65□□□□□ -1.66
CLK1-204ENST00000432425 SYNE4Q8N205 404 aa4.65□□□□□ -1.66
CLK1-204ENST00000432425 MDM1Q8TC05 714 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms