RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 LAMB1P07942 1786 aa12.29□□□□□ -0.44
CLDN4-202ENST00000431918 INO80B-WBP1J3KQ70 363 aa12.29□□□□□ -0.44
CLDN4-202ENST00000431918 MRPS9P82933 396 aaKnown RBP12.29□□□□□ -0.44
CLDN4-202ENST00000431918 CALCOCO2Q13137 446 aa12.29□□□□□ -0.44
CLDN4-202ENST00000431918 MMGT1Q8N4V1 131 aa12.29□□□□□ -0.44
CLDN4-202ENST00000431918 SH2D3CQ8N5H7 860 aa12.29□□□□□ -0.44
CLDN4-202ENST00000431918 DYDC1Q8WWB3 177 aa12.29□□□□□ -0.44
CLDN4-202ENST00000431918 INO80BQ9C086 356 aaPredicted RBP12.29□□□□□ -0.44
CLDN4-202ENST00000431918 DDX60LQ5H9U9 1706 aaKnown RBP12.28□□□□□ -0.44
CLDN4-202ENST00000431918 NDUFAB1O14561 156 aa12.28□□□□□ -0.44
CLDN4-202ENST00000431918 DAPK3O43293 454 aa12.28□□□□□ -0.44
CLDN4-202ENST00000431918 GLI1P08151 1106 aa12.28□□□□□ -0.44
CLDN4-202ENST00000431918 NSFP46459 744 aaKnown RBP12.28□□□□□ -0.44
CLDN4-202ENST00000431918 APOBEC3FQ8IUX4 373 aaKnown RBP12.28□□□□□ -0.44
CLDN4-202ENST00000431918 NLRP4Q96MN2 994 aa12.28□□□□□ -0.44
CLDN4-202ENST00000431918 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.28□□□□□ -0.44
CLDN4-202ENST00000431918 MSTO1Q9BUK6 570 aa12.28□□□□□ -0.44
CLDN4-202ENST00000431918 CXorf56Q9H5V9 222 aa12.28□□□□□ -0.44
CLDN4-202ENST00000431918 ZNF302Q9NR11 478 aa12.28□□□□□ -0.44
CLDN4-202ENST00000431918 SNX24Q9Y343 169 aa12.28□□□□□ -0.44
CLDN4-202ENST00000431918 KRT14P02533 472 aa12.28□□□□□ -0.44
CLDN4-202ENST00000431918 MYZAPP0CAP1 466 aa12.28□□□□□ -0.44
CLDN4-202ENST00000431918 HOXD13P35453 343 aa12.28□□□□□ -0.44
CLDN4-202ENST00000431918 PPP3CAQ08209 521 aa12.28□□□□□ -0.44
CLDN4-202ENST00000431918 DHX9Q08211 1270 aaKnown RBP12.28□□□□□ -0.44
CLDN4-202ENST00000431918 IRF2BP2Q7Z5L9 587 aa12.28□□□□□ -0.44
CLDN4-202ENST00000431918 WNK4Q96J92 1243 aa12.28□□□□□ -0.44
CLDN4-202ENST00000431918 NRBP2Q9NSY0 501 aa12.28□□□□□ -0.44
CLDN4-202ENST00000431918 TBX20Q9UMR3 447 aa12.28□□□□□ -0.44
CLDN4-202ENST00000431918 DAAM1Q9Y4D1 1078 aa12.28□□□□□ -0.44
CLDN4-202ENST00000431918 MAPK4P31152 587 aa12.28□□□□□ -0.44
CLDN4-202ENST00000431918 ACTN2P35609 894 aa12.28□□□□□ -0.44
CLDN4-202ENST00000431918 ACTR2P61160 394 aa12.28□□□□□ -0.44
CLDN4-202ENST00000431918 GPC5P78333 572 aa12.28□□□□□ -0.44
CLDN4-202ENST00000431918 TFAMQ00059 246 aaKnown RBP12.28□□□□□ -0.44
CLDN4-202ENST00000431918 DLK2Q6UY11 383 aa12.28□□□□□ -0.44
CLDN4-202ENST00000431918 SCARA5Q6ZMJ2 495 aa12.28□□□□□ -0.44
CLDN4-202ENST00000431918 ARHGEF19Q8IW93 802 aa12.28□□□□□ -0.44
CLDN4-202ENST00000431918 MICALL1Q8N3F8 863 aa12.28□□□□□ -0.44
CLDN4-202ENST00000431918 FBXL13Q8NEE6 735 aa12.28□□□□□ -0.44
CLDN4-202ENST00000431918 DHX38Q92620 1227 aaKnown RBP12.28□□□□□ -0.44
CLDN4-202ENST00000431918 BTBD6Q96KE9 485 aa12.28□□□□□ -0.44
CLDN4-202ENST00000431918 ELP3Q9H9T3 547 aa12.28□□□□□ -0.44
CLDN4-202ENST00000431918 CNOT8Q9UFF9 292 aaKnown RBP12.28□□□□□ -0.44
CLDN4-202ENST00000431918 MTRF1LQ9UGC7 380 aaKnown RBP12.28□□□□□ -0.44
CLDN4-202ENST00000431918 AJAP1Q9UKB5 411 aaPredicted RBP12.28□□□□□ -0.44
CLDN4-202ENST00000431918 TTI1O43156 1089 aa12.27□□□□□ -0.44
CLDN4-202ENST00000431918 SGPL1O95470 568 aa12.27□□□□□ -0.44
CLDN4-202ENST00000431918 CALCAP01258 141 aa12.27□□□□□ -0.44
CLDN4-202ENST00000431918 TMOD1P28289 359 aa12.27□□□□□ -0.44
CLDN4-202ENST00000431918 NNTQ13423 1086 aa12.27□□□□□ -0.44
CLDN4-202ENST00000431918 BRDTQ58F21 947 aaPredicted RBP12.27□□□□□ -0.44
CLDN4-202ENST00000431918 DCUN1D2Q6PH85 259 aa12.27□□□□□ -0.44
CLDN4-202ENST00000431918 THNSL1Q8IYQ7 743 aa12.27□□□□□ -0.44
CLDN4-202ENST00000431918 USP38Q8NB14 1042 aa12.27□□□□□ -0.44
CLDN4-202ENST00000431918 BCAS4Q8TDM0 211 aa12.27□□□□□ -0.44
CLDN4-202ENST00000431918 TRIM51Q9BSJ1 452 aa12.27□□□□□ -0.44
CLDN4-202ENST00000431918 CAPS2Q9BXY5 557 aa12.27□□□□□ -0.44
CLDN4-202ENST00000431918 RAB17Q9H0T7 212 aa12.27□□□□□ -0.44
CLDN4-202ENST00000431918 TAS2R14Q9NYV8 317 aa12.27□□□□□ -0.44
CLDN4-202ENST00000431918 CNTNAP1P78357 1384 aa12.27□□□□□ -0.44
CLDN4-202ENST00000431918 MAST2Q6P0Q8 1798 aa12.27□□□□□ -0.45
CLDN4-202ENST00000431918 MYO1FO00160 1098 aa12.27□□□□□ -0.45
CLDN4-202ENST00000431918 EBAG9O00559 213 aa12.27□□□□□ -0.45
CLDN4-202ENST00000431918 PJA2O43164 708 aa12.27□□□□□ -0.45
CLDN4-202ENST00000431918 TBC1D12O60347 775 aa12.27□□□□□ -0.45
CLDN4-202ENST00000431918 PTGER2P43116 358 aa12.27□□□□□ -0.45
CLDN4-202ENST00000431918 TRIP13Q15645 432 aaPredicted RBP12.27□□□□□ -0.45
CLDN4-202ENST00000431918 PPM1EQ8WY54 764 aa12.27□□□□□ -0.45
CLDN4-202ENST00000431918 RNPC3Q96LT9 517 aaKnown RBP12.27□□□□□ -0.45
CLDN4-202ENST00000431918 GMLQ99445 158 aa12.27□□□□□ -0.45
CLDN4-202ENST00000431918 NUP85Q9BW27 656 aa12.27□□□□□ -0.45
CLDN4-202ENST00000431918 PPANQ9NQ55 473 aaKnown RBP12.27□□□□□ -0.45
CLDN4-202ENST00000431918 DNAJC17Q9NVM6 304 aaKnown RBP12.27□□□□□ -0.45
CLDN4-202ENST00000431918 ANAPC7Q9UJX3 599 aa12.27□□□□□ -0.45
CLDN4-202ENST00000431918 FRMD3A2A2Y4 597 aa12.27□□□□□ -0.45
CLDN4-202ENST00000431918 ITGA4P13612 1032 aa12.27□□□□□ -0.45
CLDN4-202ENST00000431918 RPS12P25398 132 aaKnown RBP12.27□□□□□ -0.45
CLDN4-202ENST00000431918 CNTN2Q02246 1040 aa12.27□□□□□ -0.45
CLDN4-202ENST00000431918 MEI1Q5TIA1 1274 aa12.27□□□□□ -0.45
CLDN4-202ENST00000431918 ZSWIM2Q8NEG5 633 aa12.27□□□□□ -0.45
CLDN4-202ENST00000431918 TAS1R2Q8TE23 839 aa12.27□□□□□ -0.45
CLDN4-202ENST00000431918 LCMT1Q9UIC8 334 aa12.27□□□□□ -0.45
CLDN4-202ENST00000431918 SUFUQ9UMX1 484 aa12.27□□□□□ -0.45
CLDN4-202ENST00000431918 ANKRD62A6NC57 917 aa12.26□□□□□ -0.45
CLDN4-202ENST00000431918 ANKRD63C9JTQ0 380 aa12.26□□□□□ -0.45
CLDN4-202ENST00000431918 THAP12O43422 761 aa12.26□□□□□ -0.45
CLDN4-202ENST00000431918 TGFB2P61812 414 aa12.26□□□□□ -0.45
CLDN4-202ENST00000431918 KCTD2Q14681 263 aa12.26□□□□□ -0.45
CLDN4-202ENST00000431918 LIN9Q5TKA1 542 aa12.26□□□□□ -0.45
CLDN4-202ENST00000431918 KAZNQ674X7 775 aa12.26□□□□□ -0.45
CLDN4-202ENST00000431918 PHLDB3Q6NSJ2 640 aa12.26□□□□□ -0.45
CLDN4-202ENST00000431918 TMEM270Q6UE05 265 aa12.26□□□□□ -0.45
CLDN4-202ENST00000431918 CDR2LQ86X02 465 aaPredicted RBP12.26□□□□□ -0.45
CLDN4-202ENST00000431918 HOMEZQ8IX15 550 aa12.26□□□□□ -0.45
CLDN4-202ENST00000431918 RHOT2Q8IXI1 618 aa12.26□□□□□ -0.45
CLDN4-202ENST00000431918 SLC17A8Q8NDX2 589 aa12.26□□□□□ -0.45
CLDN4-202ENST00000431918 NXF1Q9UBU9 619 aaKnown RBP12.26□□□□□ -0.45
CLDN4-202ENST00000431918 DGAT1O75907 488 aa12.26□□□□□ -0.45
CLDN4-202ENST00000431918 RDXP35241 583 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms