RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 FAM189BP81408 668 aa8.84□□□□□ -0.99
ECHDC1-207ENST00000430841 FGD1P98174 961 aa8.84□□□□□ -0.99
ECHDC1-207ENST00000430841 CDC42EP1Q00587 391 aa8.84□□□□□ -0.99
ECHDC1-207ENST00000430841 ITGB3BPQ13352 177 aaPredicted RBP8.84□□□□□ -0.99
ECHDC1-207ENST00000430841 LETM2Q2VYF4 491 aa8.84□□□□□ -0.99
ECHDC1-207ENST00000430841 ZNF746Q6NUN9 644 aaPredicted RBP8.84□□□□□ -0.99
ECHDC1-207ENST00000430841 EFCAB12Q6NXP0 572 aa8.84□□□□□ -0.99
ECHDC1-207ENST00000430841 C15orf39Q6ZRI6 1047 aa8.84□□□□□ -0.99
ECHDC1-207ENST00000430841 NIPA1Q7RTP0 329 aa8.84□□□□□ -0.99
ECHDC1-207ENST00000430841 GPR149Q86SP6 731 aa8.84□□□□□ -0.99
ECHDC1-207ENST00000430841 DDX53Q86TM3 631 aaKnown RBP8.84□□□□□ -0.99
ECHDC1-207ENST00000430841 CMTR1Q8N1G2 835 aaKnown RBP8.84□□□□□ -0.99
ECHDC1-207ENST00000430841 GPR161Q8N6U8 529 aaKnown RBP8.84□□□□□ -0.99
ECHDC1-207ENST00000430841 ZNF713Q8N859 430 aaPredicted RBP8.84□□□□□ -0.99
ECHDC1-207ENST00000430841 CCDC12Q8WUD4 166 aaPredicted RBP8.84□□□□□ -0.99
ECHDC1-207ENST00000430841 NXPE3Q969Y0 559 aa8.84□□□□□ -0.99
ECHDC1-207ENST00000430841 PGBD1Q96JS3 809 aa8.84□□□□□ -0.99
ECHDC1-207ENST00000430841 MTA3Q9BTC8 594 aa8.84□□□□□ -0.99
ECHDC1-207ENST00000430841 LY9Q9HBG7 655 aa8.84□□□□□ -0.99
ECHDC1-207ENST00000430841 RIC8AQ9NPQ8 531 aa8.84□□□□□ -0.99
ECHDC1-207ENST00000430841 RBM28Q9NW13 759 aaKnown RBP8.84□□□□□ -0.99
ECHDC1-207ENST00000430841 GABBR1Q9UBS5 961 aa8.84□□□□□ -0.99
ECHDC1-207ENST00000430841 WNT16Q9UBV4 365 aa8.84□□□□□ -0.99
ECHDC1-207ENST00000430841 PIN4Q9Y237 131 aaKnown RBP8.84□□□□□ -0.99
ECHDC1-207ENST00000430841 SIT1Q9Y3P8 196 aa8.84□□□□□ -0.99
ECHDC1-207ENST00000430841 VPS13AQ96RL7 3174 aa8.84□□□□□ -0.99
ECHDC1-207ENST00000430841 NCOR2Q9Y618 2525 aa8.84□□□□□ -0.99
ECHDC1-207ENST00000430841 CLUHO75153 1309 aa8.83□□□□□ -1
ECHDC1-207ENST00000430841 DENND4AQ7Z401 1863 aa8.83□□□□□ -1
ECHDC1-207ENST00000430841 A0A0U1RQF3 1178 aa8.83□□□□□ -1
ECHDC1-207ENST00000430841 WDR64B1ANS9 1081 aa8.83□□□□□ -1
ECHDC1-207ENST00000430841 C2CD2LO14523 706 aa8.83□□□□□ -1
ECHDC1-207ENST00000430841 SIAH2O43255 324 aa8.83□□□□□ -1
ECHDC1-207ENST00000430841 LAMTOR5O43504 91 aa8.83□□□□□ -1
ECHDC1-207ENST00000430841 PI15O43692 258 aa8.83□□□□□ -1
ECHDC1-207ENST00000430841 GLUD1P00367 558 aa8.83□□□□□ -1
ECHDC1-207ENST00000430841 SRFP11831 508 aa8.83□□□□□ -1
ECHDC1-207ENST00000430841 AK2P54819 239 aa8.83□□□□□ -1
ECHDC1-207ENST00000430841 NUCB1Q02818 461 aa8.83□□□□□ -1
ECHDC1-207ENST00000430841 DSC3Q14574 896 aa8.83□□□□□ -1
ECHDC1-207ENST00000430841 NOMO2Q5JPE7 1267 aa8.83□□□□□ -1
ECHDC1-207ENST00000430841 CLLU1OSQ5K130 101 aa8.83□□□□□ -1
ECHDC1-207ENST00000430841 ABHD15Q6UXT9 468 aa8.83□□□□□ -1
ECHDC1-207ENST00000430841 LRRC55Q6ZSA7 311 aa8.83□□□□□ -1
ECHDC1-207ENST00000430841 TMTC3Q6ZXV5 915 aa8.83□□□□□ -1
ECHDC1-207ENST00000430841 CATSPER4Q7RTX7 472 aa8.83□□□□□ -1
ECHDC1-207ENST00000430841 RAB11FIP4Q86YS3 637 aa8.83□□□□□ -1
ECHDC1-207ENST00000430841 LRRC71Q8N4P6 559 aa8.83□□□□□ -1
ECHDC1-207ENST00000430841 SRBD1Q8N5C6 995 aaKnown RBP8.83□□□□□ -1
ECHDC1-207ENST00000430841 ATRIPQ8WXE1 791 aa8.83□□□□□ -1
ECHDC1-207ENST00000430841 IGSF21Q96ID5 467 aa8.83□□□□□ -1
ECHDC1-207ENST00000430841 CHAMP1Q96JM3 812 aa8.83□□□□□ -1
ECHDC1-207ENST00000430841 ZNF668Q96K58 619 aaPredicted RBP8.83□□□□□ -1
ECHDC1-207ENST00000430841 BCO2Q9BYV7 579 aa8.83□□□□□ -1
ECHDC1-207ENST00000430841 MAN1C1Q9NR34 630 aa8.83□□□□□ -1
ECHDC1-207ENST00000430841 ARHGEF3Q9NR81 526 aa8.83□□□□□ -1
ECHDC1-207ENST00000430841 RAB23Q9ULC3 237 aa8.83□□□□□ -1
ECHDC1-207ENST00000430841 USP18Q9UMW8 372 aa8.83□□□□□ -1
ECHDC1-207ENST00000430841 PCDHA10Q9Y5I2 948 aa8.83□□□□□ -1
ECHDC1-207ENST00000430841 SMCO2A6NFE2 343 aa8.82□□□□□ -1
ECHDC1-207ENST00000430841 CHMP2AO43633 222 aa8.82□□□□□ -1
ECHDC1-207ENST00000430841 GPR32O75388 356 aa8.82□□□□□ -1
ECHDC1-207ENST00000430841 ATG7O95352 703 aa8.82□□□□□ -1
ECHDC1-207ENST00000430841 DARSP14868 501 aaKnown RBP8.82□□□□□ -1
ECHDC1-207ENST00000430841 SREBF1P36956 1147 aa8.82□□□□□ -1
ECHDC1-207ENST00000430841 AKAP17AQ02040 695 aaKnown RBP8.82□□□□□ -1
ECHDC1-207ENST00000430841 LMNB2Q03252 620 aa8.82□□□□□ -1
ECHDC1-207ENST00000430841 PTPN14Q15678 1187 aa8.82□□□□□ -1
ECHDC1-207ENST00000430841 RSPO4Q2I0M5 234 aaPredicted RBP8.82□□□□□ -1
ECHDC1-207ENST00000430841 LONRF3Q496Y0 759 aa8.82□□□□□ -1
ECHDC1-207ENST00000430841 KIAA0319Q5VV43 1072 aa8.82□□□□□ -1
ECHDC1-207ENST00000430841 WWC2Q6AWC2 1192 aa8.82□□□□□ -1
ECHDC1-207ENST00000430841 DCLRE1AQ6PJP8 1040 aa8.82□□□□□ -1
ECHDC1-207ENST00000430841 CYP26C1Q6V0L0 522 aa8.82□□□□□ -1
ECHDC1-207ENST00000430841 GET4Q7L5D6 327 aaPredicted RBP8.82□□□□□ -1
ECHDC1-207ENST00000430841 C1orf210Q8IVY1 113 aa8.82□□□□□ -1
ECHDC1-207ENST00000430841 SMC5Q8IY18 1101 aa8.82□□□□□ -1
ECHDC1-207ENST00000430841 MB21D2Q8IYB1 491 aaPredicted RBP8.82□□□□□ -1
ECHDC1-207ENST00000430841 RDH13Q8NBN7 331 aa8.82□□□□□ -1
ECHDC1-207ENST00000430841 IGDCC4Q8TDY8 1250 aa8.82□□□□□ -1
ECHDC1-207ENST00000430841 SMG7Q92540 1137 aaKnown RBP8.82□□□□□ -1
ECHDC1-207ENST00000430841 JPH2Q9BR39 696 aaPredicted RBP8.82□□□□□ -1
ECHDC1-207ENST00000430841 GDPD2Q9HCC8 539 aa8.82□□□□□ -1
ECHDC1-207ENST00000430841 CHST12Q9NRB3 414 aa8.82□□□□□ -1
ECHDC1-207ENST00000430841 SPATA6Q9NWH7 488 aaPredicted RBP8.82□□□□□ -1
ECHDC1-207ENST00000430841 GMEB2Q9UKD1 530 aa8.82□□□□□ -1
ECHDC1-207ENST00000430841 IRAK3Q9Y616 596 aa8.82□□□□□ -1
ECHDC1-207ENST00000430841 CEP250Q9BV73 2442 aa8.82□□□□□ -1
ECHDC1-207ENST00000430841 MYO15AQ9UKN7 3530 aa8.81□□□□□ -1
ECHDC1-207ENST00000430841 IGKV6D-21A0A0A0MT36 114 aa8.81□□□□□ -1
ECHDC1-207ENST00000430841 DDX11L8A8MPP1 907 aa8.81□□□□□ -1
ECHDC1-207ENST00000430841 PRR5-ARHGAP8B1AHC4 643 aa8.81□□□□□ -1
ECHDC1-207ENST00000430841 MEIS1O00470 390 aa8.81□□□□□ -1
ECHDC1-207ENST00000430841 SH2B2O14492 632 aaPredicted RBP8.81□□□□□ -1
ECHDC1-207ENST00000430841 INPPL1O15357 1258 aa8.81□□□□□ -1
ECHDC1-207ENST00000430841 NARSO43776 548 aaKnown RBP8.81□□□□□ -1
ECHDC1-207ENST00000430841 GAS7O60861 476 aa8.81□□□□□ -1
ECHDC1-207ENST00000430841 CCNE2O96020 404 aa8.81□□□□□ -1
ECHDC1-207ENST00000430841 DCNP07585 359 aaKnown RBP8.81□□□□□ -1
ECHDC1-207ENST00000430841 SP9P0CG40 484 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms