RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 TNFSF13BQ9Y275 285 aa12.06□□□□□ -0.48
CHD4-202ENST00000430771 RALGAPA2Q2PPJ7 1873 aa12.06□□□□□ -0.48
CHD4-202ENST00000430771 BICDL2A1A5D9 508 aa12.05□□□□□ -0.48
CHD4-202ENST00000430771 SYCE3A1L190 88 aa12.05□□□□□ -0.48
CHD4-202ENST00000430771 KIAA0391O15091 583 aaKnown RBP12.05□□□□□ -0.48
CHD4-202ENST00000430771 B4GALT5O43286 388 aa12.05□□□□□ -0.48
CHD4-202ENST00000430771 CALUO43852 315 aaPredicted RBP12.05□□□□□ -0.48
CHD4-202ENST00000430771 BAIAP3O94812 1187 aa12.05□□□□□ -0.48
CHD4-202ENST00000430771 EDN1P05305 212 aa12.05□□□□□ -0.48
CHD4-202ENST00000430771 SKIP12755 728 aa12.05□□□□□ -0.48
CHD4-202ENST00000430771 PRCPP42785 496 aa12.05□□□□□ -0.48
CHD4-202ENST00000430771 RGS19P49795 217 aa12.05□□□□□ -0.48
CHD4-202ENST00000430771 PAK1Q13153 545 aa12.05□□□□□ -0.48
CHD4-202ENST00000430771 NOLC1Q14978 699 aaKnown RBP eCLIP12.05□□□□□ -0.48
CHD4-202ENST00000430771 CT47A1Q5JQC4 288 aaPredicted RBP12.05□□□□□ -0.48
CHD4-202ENST00000430771 ISM2Q6H9L7 571 aa12.05□□□□□ -0.48
CHD4-202ENST00000430771 SLFN12LQ6IEE8 588 aa12.05□□□□□ -0.48
CHD4-202ENST00000430771 SLC27A1Q6PCB7 646 aa12.05□□□□□ -0.48
CHD4-202ENST00000430771 MPZL3Q6UWV2 235 aa12.05□□□□□ -0.48
CHD4-202ENST00000430771 HACE1Q8IYU2 909 aa12.05□□□□□ -0.48
CHD4-202ENST00000430771 ADSSL1Q8N142 457 aa12.05□□□□□ -0.48
CHD4-202ENST00000430771 DBF4BQ8NFT6 615 aa12.05□□□□□ -0.48
CHD4-202ENST00000430771 DHTKD1Q96HY7 919 aaPredicted RBP12.05□□□□□ -0.48
CHD4-202ENST00000430771 CPB2Q96IY4 423 aa12.05□□□□□ -0.48
CHD4-202ENST00000430771 ACO2Q99798 780 aaKnown RBP12.05□□□□□ -0.48
CHD4-202ENST00000430771 TARS2Q9BW92 718 aaKnown RBP12.05□□□□□ -0.48
CHD4-202ENST00000430771 MTIF3Q9H2K0 278 aaKnown RBP12.05□□□□□ -0.48
CHD4-202ENST00000430771 PDZD7Q9H5P4 517 aa12.05□□□□□ -0.48
CHD4-202ENST00000430771 RNF216Q9NWF9 866 aaPredicted RBP12.05□□□□□ -0.48
CHD4-202ENST00000430771 CTNND2Q9UQB3 1225 aa12.05□□□□□ -0.48
CHD4-202ENST00000430771 A0A1B0GUA9 196 aa12.04□□□□□ -0.48
CHD4-202ENST00000430771 PDXKO00764 312 aa12.04□□□□□ -0.48
CHD4-202ENST00000430771 CLDN3O15551 220 aa12.04□□□□□ -0.48
CHD4-202ENST00000430771 PROZP22891 400 aa12.04□□□□□ -0.48
CHD4-202ENST00000430771 LRRC63Q05C16 580 aa12.04□□□□□ -0.48
CHD4-202ENST00000430771 TYRO3Q06418 890 aa12.04□□□□□ -0.48
CHD4-202ENST00000430771 KCNA1Q09470 495 aa12.04□□□□□ -0.48
CHD4-202ENST00000430771 IKBKEQ14164 716 aa12.04□□□□□ -0.48
CHD4-202ENST00000430771 GPNMBQ14956 572 aa12.04□□□□□ -0.48
CHD4-202ENST00000430771 KYAT1Q16773 422 aa12.04□□□□□ -0.48
CHD4-202ENST00000430771 DPCR1Q3MIW9 517 aa12.04□□□□□ -0.48
CHD4-202ENST00000430771 KLHL10Q6JEL2 608 aa12.04□□□□□ -0.48
CHD4-202ENST00000430771 ARMCX5Q6P1M9 558 aa12.04□□□□□ -0.48
CHD4-202ENST00000430771 P2RX5Q93086 422 aa12.04□□□□□ -0.48
CHD4-202ENST00000430771 TCHPQ9BT92 498 aa12.04□□□□□ -0.48
CHD4-202ENST00000430771 ANP32EQ9BTT0 268 aa12.04□□□□□ -0.48
CHD4-202ENST00000430771 NAT10Q9H0A0 1025 aaKnown RBP12.04□□□□□ -0.48
CHD4-202ENST00000430771 TSPYL2Q9H2G4 693 aaPredicted RBP12.04□□□□□ -0.48
CHD4-202ENST00000430771 MAPK8IP1Q9UQF2 711 aa12.04□□□□□ -0.48
CHD4-202ENST00000430771 DNAH12Q6ZR08 3092 aa12.04□□□□□ -0.48
CHD4-202ENST00000430771 TET1Q8NFU7 2136 aa12.04□□□□□ -0.48
CHD4-202ENST00000430771 ABHD14A-ACY1A0A1B0GW23 586 aa12.03□□□□□ -0.48
CHD4-202ENST00000430771 NPTXRO95502 500 aa12.03□□□□□ -0.48
CHD4-202ENST00000430771 MCF2P10911 925 aa12.03□□□□□ -0.48
CHD4-202ENST00000430771 HARSP12081 509 aaKnown RBP12.03□□□□□ -0.48
CHD4-202ENST00000430771 BMP6P22004 513 aa12.03□□□□□ -0.48
CHD4-202ENST00000430771 GARTP22102 1010 aa12.03□□□□□ -0.48
CHD4-202ENST00000430771 CCNE1P24864 410 aa12.03□□□□□ -0.48
CHD4-202ENST00000430771 HOXA11P31270 313 aaPredicted RBP12.03□□□□□ -0.48
CHD4-202ENST00000430771 KCNJ6P48051 423 aa12.03□□□□□ -0.48
CHD4-202ENST00000430771 MCL1Q07820 350 aa12.03□□□□□ -0.48
CHD4-202ENST00000430771 DSC3Q14574 896 aa12.03□□□□□ -0.48
CHD4-202ENST00000430771 EDRF1Q3B7T1 1238 aa12.03□□□□□ -0.48
CHD4-202ENST00000430771 FOXR2Q6PJQ5 311 aa12.03□□□□□ -0.48
CHD4-202ENST00000430771 C12orf56Q8IXR9 622 aa12.03□□□□□ -0.48
CHD4-202ENST00000430771 NELFBQ8WX92 580 aa12.03□□□□□ -0.48
CHD4-202ENST00000430771 POMGNT1Q8WZA1 660 aa12.03□□□□□ -0.48
CHD4-202ENST00000430771 ADAM2Q99965 735 aa12.03□□□□□ -0.48
CHD4-202ENST00000430771 MSTO1Q9BUK6 570 aa12.03□□□□□ -0.48
CHD4-202ENST00000430771 TRAIPQ9BWF2 469 aa12.03□□□□□ -0.48
CHD4-202ENST00000430771 OSBPL7Q9BZF2 842 aa12.03□□□□□ -0.48
CHD4-202ENST00000430771 CDT1Q9H211 546 aa12.03□□□□□ -0.48
CHD4-202ENST00000430771 KCTD10Q9H3F6 313 aa12.03□□□□□ -0.48
CHD4-202ENST00000430771 TMX1Q9H3N1 280 aa12.03□□□□□ -0.48
CHD4-202ENST00000430771 AGPAT3Q9NRZ7 376 aa12.03□□□□□ -0.48
CHD4-202ENST00000430771 FAM105AQ9NUU6 356 aa12.03□□□□□ -0.48
CHD4-202ENST00000430771 TRAF3IP3Q9Y228 551 aa12.03□□□□□ -0.48
CHD4-202ENST00000430771 PPP1R3GB7ZBB8 358 aa12.02□□□□□ -0.49
CHD4-202ENST00000430771 LDHAP00338 332 aaKnown RBP12.02□□□□□ -0.49
CHD4-202ENST00000430771 AMHP03971 560 aa12.02□□□□□ -0.49
CHD4-202ENST00000430771 NR3C1P04150 777 aa12.02□□□□□ -0.49
CHD4-202ENST00000430771 CD44P16070 742 aaKnown RBP12.02□□□□□ -0.49
CHD4-202ENST00000430771 RPL13P26373 211 aaKnown RBP12.02□□□□□ -0.49
CHD4-202ENST00000430771 ERCC5P28715 1186 aaPredicted RBP12.02□□□□□ -0.49
CHD4-202ENST00000430771 HOXD13P35453 343 aa12.02□□□□□ -0.49
CHD4-202ENST00000430771 MYBPC2Q14324 1141 aa12.02□□□□□ -0.49
CHD4-202ENST00000430771 NFIL3Q16649 462 aa12.02□□□□□ -0.49
CHD4-202ENST00000430771 ZCWPW2Q504Y3 356 aa12.02□□□□□ -0.49
CHD4-202ENST00000430771 EEF1DP3Q658K8 133 aa12.02□□□□□ -0.49
CHD4-202ENST00000430771 CENPPQ6IPU0 288 aa12.02□□□□□ -0.49
CHD4-202ENST00000430771 SLC39A4Q6P5W5 647 aa12.02□□□□□ -0.49
CHD4-202ENST00000430771 SLC24A5Q71RS6 500 aa12.02□□□□□ -0.49
CHD4-202ENST00000430771 PTPRHQ9HD43 1115 aa12.02□□□□□ -0.49
CHD4-202ENST00000430771 RGS18Q9NS28 235 aa12.02□□□□□ -0.49
CHD4-202ENST00000430771 RWDD2AQ9UIY3 292 aa12.02□□□□□ -0.49
CHD4-202ENST00000430771 STYXL1Q9Y6J8 313 aa12.02□□□□□ -0.49
CHD4-202ENST00000430771 CITO14578 2027 aa12.01□□□□□ -0.49
CHD4-202ENST00000430771 TTLL13PA6NNM8 815 aa12.01□□□□□ -0.49
CHD4-202ENST00000430771 ZBBXA8MT70 800 aa12.01□□□□□ -0.49
CHD4-202ENST00000430771 ANKRD63C9JTQ0 380 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms