RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 SUGP1Q8IWZ8 645 aaKnown RBP7.75□□□□□ -1.17
COL28A1-202ENST00000430711 ZDHHC15Q96MV8 337 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 FMO2Q99518 471 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 LXNQ9BS40 222 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 PAGR1Q9BTK6 254 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 UBE2TQ9NPD8 197 aaPredicted RBP7.75□□□□□ -1.17
COL28A1-202ENST00000430711 AAASQ9NRG9 546 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 OLFML3Q9NRN5 406 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 NYAP2Q9P242 653 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 APEX2Q9UBZ4 518 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 AMFRQ9UKV5 643 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 AGAP1Q9UPQ3 857 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 DNAH12Q6ZR08 3092 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 COL4A5P29400 1685 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 YDJCA8MPS7 323 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 TCP10L2B9ZVM9 353 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 CES2O00748 559 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 SLC16A3O15427 465 aaKnown RBP7.75□□□□□ -1.17
COL28A1-202ENST00000430711 SORBS3O60504 671 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 GJB6O95452 261 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 FTLP02792 175 aaPredicted RBP7.75□□□□□ -1.17
COL28A1-202ENST00000430711 MMEP08473 750 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 TMEM253P0C7T8 217 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 CETPP11597 493 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 PSMC2P35998 433 aaKnown RBP7.75□□□□□ -1.17
COL28A1-202ENST00000430711 NT5C2P49902 561 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 PEX5P50542 639 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 MNAT1P51948 309 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 AP3B2Q13367 1082 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 MPP2Q14168 576 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 TRIP13Q15645 432 aaPredicted RBP7.75□□□□□ -1.17
COL28A1-202ENST00000430711 AOC3Q16853 763 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 ODF2Q5BJF6 829 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 HHIPL2Q6UWX4 724 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 LRIG3Q6UXM1 1119 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 ARHGAP27Q6ZUM4 889 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 COL23A1Q86Y22 540 aaPredicted RBP7.75□□□□□ -1.17
COL28A1-202ENST00000430711 SLF2Q8IX21 1173 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 LRRC34Q8IZ02 419 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 RPUSD2Q8IZ73 545 aaKnown RBP7.75□□□□□ -1.17
COL28A1-202ENST00000430711 DCAF4Q8WV16 495 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 C1orf54Q8WWF1 131 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 ZKSCAN4Q969J2 545 aaPredicted RBP7.75□□□□□ -1.17
COL28A1-202ENST00000430711 SAAL1Q96ER3 474 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 CALR3Q96L12 384 aaKnown RBP7.75□□□□□ -1.17
COL28A1-202ENST00000430711 ZNF317Q96PQ6 595 aaPredicted RBP7.75□□□□□ -1.17
COL28A1-202ENST00000430711 SELENOSQ9BQE4 189 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 POLR3CQ9BUI4 534 aaPredicted RBP7.75□□□□□ -1.17
COL28A1-202ENST00000430711 STRA6Q9BX79 667 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 STK33Q9BYT3 514 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 WDR11Q9BZH6 1224 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 STK24Q9Y6E0 443 aa7.75□□□□□ -1.17
COL28A1-202ENST00000430711 CYP26A1O43174 497 aa7.74□□□□□ -1.17
COL28A1-202ENST00000430711 ECE2O60344 883 aa7.74□□□□□ -1.17
COL28A1-202ENST00000430711 DLATP10515 647 aaKnown RBP7.74□□□□□ -1.17
COL28A1-202ENST00000430711 BFSP1Q12934 665 aa7.74□□□□□ -1.17
COL28A1-202ENST00000430711 SNX1Q13596 522 aa7.74□□□□□ -1.17
COL28A1-202ENST00000430711 PLA2G4FQ68DD2 849 aa7.74□□□□□ -1.17
COL28A1-202ENST00000430711 MIGA2Q7L4E1 593 aa7.74□□□□□ -1.17
COL28A1-202ENST00000430711 CBWD2Q8IUF1 395 aa7.74□□□□□ -1.17
COL28A1-202ENST00000430711 FAM178BQ8IXR5 827 aa7.74□□□□□ -1.17
COL28A1-202ENST00000430711 GPATCH11Q8N954 259 aa7.74□□□□□ -1.17
COL28A1-202ENST00000430711 SLC5A5Q92911 643 aa7.74□□□□□ -1.17
COL28A1-202ENST00000430711 ZNF622Q969S3 477 aaKnown RBP eCLIP7.74□□□□□ -1.17
COL28A1-202ENST00000430711 AGBL1Q96MI9 1066 aa7.74□□□□□ -1.17
COL28A1-202ENST00000430711 PSMD1Q99460 953 aa7.74□□□□□ -1.17
COL28A1-202ENST00000430711 AGPAT1Q99943 283 aa7.74□□□□□ -1.17
COL28A1-202ENST00000430711 ERP44Q9BS26 406 aa7.74□□□□□ -1.17
COL28A1-202ENST00000430711 PI4K2AQ9BTU6 479 aa7.74□□□□□ -1.17
COL28A1-202ENST00000430711 ADAM33Q9BZ11 813 aa7.74□□□□□ -1.17
COL28A1-202ENST00000430711 PARVGQ9HBI0 331 aa7.74□□□□□ -1.17
COL28A1-202ENST00000430711 ABCF3Q9NUQ8 709 aa7.74□□□□□ -1.17
COL28A1-202ENST00000430711 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.74□□□□□ -1.17
COL28A1-202ENST00000430711 NOCTQ9UK39 431 aaKnown RBP7.74□□□□□ -1.17
COL28A1-202ENST00000430711 A0A0A6YYK5 440 aaPredicted RBP7.74□□□□□ -1.17
COL28A1-202ENST00000430711 C5orf60A6NFR6 353 aa7.74□□□□□ -1.17
COL28A1-202ENST00000430711 A8MUI8 341 aa7.74□□□□□ -1.17
COL28A1-202ENST00000430711 H0YHG0 523 aa7.74□□□□□ -1.17
COL28A1-202ENST00000430711 NFIBO00712 420 aa7.74□□□□□ -1.17
COL28A1-202ENST00000430711 EXOC3O60645 756 aa7.74□□□□□ -1.17
COL28A1-202ENST00000430711 CTNND1O60716 968 aaKnown RBP7.74□□□□□ -1.17
COL28A1-202ENST00000430711 RARAP10276 462 aa7.74□□□□□ -1.17
COL28A1-202ENST00000430711 FERP16591 822 aa7.74□□□□□ -1.17
COL28A1-202ENST00000430711 PSMC4P43686 418 aa7.74□□□□□ -1.17
COL28A1-202ENST00000430711 SCTRP47872 440 aa7.74□□□□□ -1.17
COL28A1-202ENST00000430711 ZNF131P52739 623 aa7.74□□□□□ -1.17
COL28A1-202ENST00000430711 MAP2K1Q02750 393 aaPredicted RBP7.74□□□□□ -1.17
COL28A1-202ENST00000430711 MLLT1Q03111 559 aaPredicted RBP7.74□□□□□ -1.17
COL28A1-202ENST00000430711 KIF22Q14807 665 aa7.74□□□□□ -1.17
COL28A1-202ENST00000430711 LONRF1Q17RB8 773 aa7.74□□□□□ -1.17
COL28A1-202ENST00000430711 LMBRD2Q68DH5 695 aaPredicted RBP7.74□□□□□ -1.17
COL28A1-202ENST00000430711 MOXD1Q6UVY6 613 aa7.74□□□□□ -1.17
COL28A1-202ENST00000430711 B3GNT9Q6UX72 402 aa7.74□□□□□ -1.17
COL28A1-202ENST00000430711 CCDC25Q86WR0 208 aa7.74□□□□□ -1.17
COL28A1-202ENST00000430711 FUKQ8N0W3 1084 aa7.74□□□□□ -1.17
COL28A1-202ENST00000430711 TMEM130Q8N3G9 435 aa7.74□□□□□ -1.17
COL28A1-202ENST00000430711 MGARPQ8TDB4 240 aa7.74□□□□□ -1.17
COL28A1-202ENST00000430711 CTNNBL1Q8WYA6 563 aaPredicted RBP7.74□□□□□ -1.17
COL28A1-202ENST00000430711 CCT6BQ92526 530 aa7.74□□□□□ -1.17
COL28A1-202ENST00000430711 XPO6Q96QU8 1125 aaKnown RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms