RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 CUEDC2Q9H467 287 aa9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 COPRSQ9NQ92 184 aa9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 METTL5Q9NRN9 209 aaKnown RBP9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 MTUS1Q9ULD2 1270 aa9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 DMTF1Q9Y222 760 aa9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 COL5A2P05997 1499 aaPredicted RBP9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 TOGARAM1Q9Y4F4 1720 aa9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 TBCAO75347 108 aaKnown RBP9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 DGKIO75912 1065 aa9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 BBOX1O75936 387 aa9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 KRT36O76013 467 aa9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 RXRGP48443 463 aa9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 NAA20P61599 178 aa9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 SPCS2Q15005 226 aa9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 TRIM71Q2Q1W2 868 aaKnown RBP9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 C6orf183Q5T699 404 aa9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 DENND2CQ68D51 928 aa9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 KLHDC10Q6PID8 442 aa9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 DHRS4L2Q6PKH6 230 aa9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 ESX1Q8N693 406 aa9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 NKX2-3Q8TAU0 364 aa9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 ERP27Q96DN0 273 aa9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 FNBP1Q96RU3 617 aa9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 FMO2Q99518 471 aa9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 TUT1Q9H6E5 874 aaKnown RBP9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 AZI2Q9H6S1 392 aa9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 USP40Q9NVE5 1235 aa9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 DDX18Q9NVP1 670 aaKnown RBP9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 THEGQ9P2T0 379 aa9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 FAF1Q9UNN5 650 aaPredicted RBP9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 HPS5Q9UPZ3 1129 aa9.47□□□□□ -0.89
CDC42BPA-206ENST00000429440 FUOMA2VDF0 154 aa9.46□□□□□ -0.89
CDC42BPA-206ENST00000429440 SMIM23A6NLE4 172 aa9.46□□□□□ -0.89
CDC42BPA-206ENST00000429440 DAPK3O43293 454 aa9.46□□□□□ -0.89
CDC42BPA-206ENST00000429440 FBXO21O94952 628 aa9.46□□□□□ -0.89
CDC42BPA-206ENST00000429440 OR6B1O95007 311 aa9.46□□□□□ -0.89
CDC42BPA-206ENST00000429440 PHBP35232 272 aa9.46□□□□□ -0.89
CDC42BPA-206ENST00000429440 IGHMBP2P38935 993 aaKnown RBP9.46□□□□□ -0.89
CDC42BPA-206ENST00000429440 CCR3P51677 355 aa9.46□□□□□ -0.89
CDC42BPA-206ENST00000429440 CTAG1AP78358 180 aa9.46□□□□□ -0.89
CDC42BPA-206ENST00000429440 TGFBIQ15582 683 aa9.46□□□□□ -0.89
CDC42BPA-206ENST00000429440 VWA3BQ502W6 1294 aa9.46□□□□□ -0.89
CDC42BPA-206ENST00000429440 CGB2Q6NT52 195 aa9.46□□□□□ -0.89
CDC42BPA-206ENST00000429440 KRT27Q7Z3Y8 459 aa9.46□□□□□ -0.89
CDC42BPA-206ENST00000429440 ARHGAP24Q8N264 748 aa9.46□□□□□ -0.89
CDC42BPA-206ENST00000429440 GIPC3Q8TF64 312 aa9.46□□□□□ -0.89
CDC42BPA-206ENST00000429440 PYROXD1Q8WU10 500 aa9.46□□□□□ -0.89
CDC42BPA-206ENST00000429440 CCDC85AQ96PX6 553 aaPredicted RBP9.46□□□□□ -0.89
CDC42BPA-206ENST00000429440 NEURL2Q9BR09 285 aa9.46□□□□□ -0.89
CDC42BPA-206ENST00000429440 ALG1Q9BT22 464 aa9.46□□□□□ -0.89
CDC42BPA-206ENST00000429440 CENPOQ9BU64 300 aa9.46□□□□□ -0.89
CDC42BPA-206ENST00000429440 ZMYND12Q9H0C1 365 aa9.46□□□□□ -0.89
CDC42BPA-206ENST00000429440 RBM38Q9H0Z9 239 aaKnown RBP9.46□□□□□ -0.89
CDC42BPA-206ENST00000429440 NLRC4Q9NPP4 1024 aa9.46□□□□□ -0.89
CDC42BPA-206ENST00000429440 TCP11L1Q9NUJ3 509 aa9.46□□□□□ -0.89
CDC42BPA-206ENST00000429440 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.46□□□□□ -0.89
CDC42BPA-206ENST00000429440 SELENONQ9NZV5 590 aa9.46□□□□□ -0.89
CDC42BPA-206ENST00000429440 UVRAGQ9P2Y5 699 aa9.46□□□□□ -0.89
CDC42BPA-206ENST00000429440 SALL4Q9UJQ4 1053 aa9.46□□□□□ -0.89
CDC42BPA-206ENST00000429440 DBNLQ9UJU6 430 aaKnown RBP9.46□□□□□ -0.89
CDC42BPA-206ENST00000429440 CHKBQ9Y259 395 aa9.46□□□□□ -0.89
CDC42BPA-206ENST00000429440 SLC30A1Q9Y6M5 507 aa9.46□□□□□ -0.89
CDC42BPA-206ENST00000429440 TRIM64CA6NLI5 447 aa9.46□□□□□ -0.9
CDC42BPA-206ENST00000429440 ATP5J2-PTCD1G3V325 749 aa9.46□□□□□ -0.9
CDC42BPA-206ENST00000429440 RANBP6O60518 1105 aaKnown RBP9.46□□□□□ -0.9
CDC42BPA-206ENST00000429440 PTCD1O75127 700 aaKnown RBP9.46□□□□□ -0.9
CDC42BPA-206ENST00000429440 BCAP31P51572 246 aa9.46□□□□□ -0.9
CDC42BPA-206ENST00000429440 CDR2Q01850 454 aa9.46□□□□□ -0.9
CDC42BPA-206ENST00000429440 LRP8Q14114 963 aa9.46□□□□□ -0.9
CDC42BPA-206ENST00000429440 CTC1Q2NKJ3 1217 aa9.46□□□□□ -0.9
CDC42BPA-206ENST00000429440 FYB2Q5VWT5 728 aa9.46□□□□□ -0.9
CDC42BPA-206ENST00000429440 CCSAPQ6IQ19 270 aaPredicted RBP9.46□□□□□ -0.9
CDC42BPA-206ENST00000429440 IZUMO2Q6UXV1 221 aa9.46□□□□□ -0.9
CDC42BPA-206ENST00000429440 RBM44Q6ZP01 1051 aaKnown RBP9.46□□□□□ -0.9
CDC42BPA-206ENST00000429440 CCDC125Q86Z20 511 aa9.46□□□□□ -0.9
CDC42BPA-206ENST00000429440 SMYD4Q8IYR2 804 aaPredicted RBP9.46□□□□□ -0.9
CDC42BPA-206ENST00000429440 TMCO5AQ8N6Q1 288 aa9.46□□□□□ -0.9
CDC42BPA-206ENST00000429440 SPERTQ8NA61 448 aa9.46□□□□□ -0.9
CDC42BPA-206ENST00000429440 EDC3Q96F86 508 aaKnown RBP9.46□□□□□ -0.9
CDC42BPA-206ENST00000429440 MAGEB18Q96M61 343 aa9.46□□□□□ -0.9
CDC42BPA-206ENST00000429440 GPR101Q96P66 508 aaPredicted RBP9.46□□□□□ -0.9
CDC42BPA-206ENST00000429440 TUBB6Q9BUF5 446 aa9.46□□□□□ -0.9
CDC42BPA-206ENST00000429440 PSTPIP2Q9H939 334 aa9.46□□□□□ -0.9
CDC42BPA-206ENST00000429440 MKS1Q9NXB0 559 aa9.46□□□□□ -0.9
CDC42BPA-206ENST00000429440 ARHGAP20Q9P2F6 1191 aa9.46□□□□□ -0.9
CDC42BPA-206ENST00000429440 SPDYE16A6NNV3 312 aaPredicted RBP9.45□□□□□ -0.9
CDC42BPA-206ENST00000429440 TRMUO75648 421 aaKnown RBP9.45□□□□□ -0.9
CDC42BPA-206ENST00000429440 ZNF12P17014 697 aa9.45□□□□□ -0.9
CDC42BPA-206ENST00000429440 KCNMA1Q12791 1236 aa9.45□□□□□ -0.9
CDC42BPA-206ENST00000429440 MED21Q13503 144 aa9.45□□□□□ -0.9
CDC42BPA-206ENST00000429440 RRAGBQ5VZM2 374 aa9.45□□□□□ -0.9
CDC42BPA-206ENST00000429440 PDXDC1Q6P996 788 aa9.45□□□□□ -0.9
CDC42BPA-206ENST00000429440 DSTYKQ6XUX3 929 aa9.45□□□□□ -0.9
CDC42BPA-206ENST00000429440 VPS36Q86VN1 386 aa9.45□□□□□ -0.9
CDC42BPA-206ENST00000429440 TTC5Q8N0Z6 440 aa9.45□□□□□ -0.9
CDC42BPA-206ENST00000429440 ROPN1BQ9BZX4 212 aaPredicted RBP9.45□□□□□ -0.9
CDC42BPA-206ENST00000429440 DDX47Q9H0S4 455 aaKnown RBP9.45□□□□□ -0.9
CDC42BPA-206ENST00000429440 ROPN1Q9HAT0 212 aaPredicted RBP9.45□□□□□ -0.9
CDC42BPA-206ENST00000429440 PLK2Q9NYY3 685 aa9.45□□□□□ -0.9
CDC42BPA-206ENST00000429440 ZMAT5Q9UDW3 170 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms