RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 LIG4P49917 911 aa15.99■□□□□ 0.15
SGCE-204ENST00000428696 NCKAP1LP55160 1127 aa15.99■□□□□ 0.15
SGCE-204ENST00000428696 COASYQ13057 564 aa15.99■□□□□ 0.15
SGCE-204ENST00000428696 SPOUT1Q5T280 376 aaKnown RBP15.99■□□□□ 0.15
SGCE-204ENST00000428696 KANK3Q6NY19 840 aa15.99■□□□□ 0.15
SGCE-204ENST00000428696 SLC27A1Q6PCB7 646 aa15.99■□□□□ 0.15
SGCE-204ENST00000428696 SYCP3Q8IZU3 236 aa15.99■□□□□ 0.15
SGCE-204ENST00000428696 CCDC47Q96A33 483 aaKnown RBP15.99■□□□□ 0.15
SGCE-204ENST00000428696 TIFAQ96CG3 184 aa15.99■□□□□ 0.15
SGCE-204ENST00000428696 PGBD4Q96DM1 585 aa15.99■□□□□ 0.15
SGCE-204ENST00000428696 FAM161BQ96MY7 647 aa15.99■□□□□ 0.15
SGCE-204ENST00000428696 CERS4Q9HA82 394 aa15.99■□□□□ 0.15
SGCE-204ENST00000428696 EXOC1Q9NV70 894 aa15.99■□□□□ 0.15
SGCE-204ENST00000428696 TMEM161AQ9NX61 479 aa15.99■□□□□ 0.15
SGCE-204ENST00000428696 PARP2Q9UGN5 583 aa15.99■□□□□ 0.15
SGCE-204ENST00000428696 YBX2Q9Y2T7 364 aaKnown RBP15.99■□□□□ 0.15
SGCE-204ENST00000428696 PCDHA11Q9Y5I1 949 aa15.99■□□□□ 0.15
SGCE-204ENST00000428696 SIP14410 1827 aa15.98■□□□□ 0.15
SGCE-204ENST00000428696 LCHNA4D1U4 455 aa15.98■□□□□ 0.15
SGCE-204ENST00000428696 GTPBP6O43824 516 aaPredicted RBP15.98■□□□□ 0.15
SGCE-204ENST00000428696 EDN1P05305 212 aa15.98■□□□□ 0.15
SGCE-204ENST00000428696 MYBP10242 640 aa15.98■□□□□ 0.15
SGCE-204ENST00000428696 ITGA4P13612 1032 aa15.98■□□□□ 0.15
SGCE-204ENST00000428696 FAM189BP81408 668 aa15.98■□□□□ 0.15
SGCE-204ENST00000428696 BTG3Q14201 252 aaPredicted RBP15.98■□□□□ 0.15
SGCE-204ENST00000428696 FAM187BQ17R55 369 aa15.98■□□□□ 0.15
SGCE-204ENST00000428696 UBXN11Q5T124 520 aa15.98■□□□□ 0.15
SGCE-204ENST00000428696 EEF1DP3Q658K8 133 aa15.98■□□□□ 0.15
SGCE-204ENST00000428696 TAS1R3Q7RTX0 852 aa15.98■□□□□ 0.15
SGCE-204ENST00000428696 ZNF720Q7Z2F6 126 aa15.98■□□□□ 0.15
SGCE-204ENST00000428696 APBB1IPQ7Z5R6 666 aaPredicted RBP15.98■□□□□ 0.15
SGCE-204ENST00000428696 HACE1Q8IYU2 909 aa15.98■□□□□ 0.15
SGCE-204ENST00000428696 SLC17A8Q8NDX2 589 aa15.98■□□□□ 0.15
SGCE-204ENST00000428696 ACO2Q99798 780 aaKnown RBP15.98■□□□□ 0.15
SGCE-204ENST00000428696 PDZD7Q9H5P4 517 aa15.98■□□□□ 0.15
SGCE-204ENST00000428696 SLC39A2Q9NP94 309 aa15.98■□□□□ 0.15
SGCE-204ENST00000428696 HOOK1Q9UJC3 728 aaKnown RBP15.98■□□□□ 0.15
SGCE-204ENST00000428696 MTUS1Q9ULD2 1270 aa15.98■□□□□ 0.15
SGCE-204ENST00000428696 PCDHB13Q9Y5F0 798 aa15.98■□□□□ 0.15
SGCE-204ENST00000428696 CNTNAP2Q9UHC6 1331 aa15.98■□□□□ 0.15
SGCE-204ENST00000428696 HNRNPDLO14979 420 aaKnown RBP15.97■□□□□ 0.15
SGCE-204ENST00000428696 DGKIO75912 1065 aa15.97■□□□□ 0.15
SGCE-204ENST00000428696 EOMESO95936 686 aa15.97■□□□□ 0.15
SGCE-204ENST00000428696 RPN1P04843 607 aaKnown RBP15.97■□□□□ 0.15
SGCE-204ENST00000428696 AKAP5P24588 427 aa15.97■□□□□ 0.15
SGCE-204ENST00000428696 RAB27AP51159 221 aa15.97■□□□□ 0.15
SGCE-204ENST00000428696 OSTNP61366 133 aa15.97■□□□□ 0.15
SGCE-204ENST00000428696 SNW1Q13573 536 aaKnown RBP15.97■□□□□ 0.15
SGCE-204ENST00000428696 POSTNQ15063 836 aa15.97■□□□□ 0.15
SGCE-204ENST00000428696 ZNF568Q3ZCX4 644 aa15.97■□□□□ 0.15
SGCE-204ENST00000428696 PPP2R2DQ66LE6 453 aa15.97■□□□□ 0.15
SGCE-204ENST00000428696 FAM43BQ6ZT52 329 aaPredicted RBP15.97■□□□□ 0.15
SGCE-204ENST00000428696 STXBP4Q6ZWJ1 553 aa15.97■□□□□ 0.15
SGCE-204ENST00000428696 UNC13DQ70J99 1090 aa15.97■□□□□ 0.15
SGCE-204ENST00000428696 FIBCD1Q8N539 461 aa15.97■□□□□ 0.15
SGCE-204ENST00000428696 TMEM87AQ8NBN3 555 aa15.97■□□□□ 0.15
SGCE-204ENST00000428696 ENGASEQ8NFI3 743 aa15.97■□□□□ 0.15
SGCE-204ENST00000428696 HELQQ8TDG4 1101 aa15.97■□□□□ 0.15
SGCE-204ENST00000428696 NOC3LQ8WTT2 800 aaKnown RBP15.97■□□□□ 0.15
SGCE-204ENST00000428696 ERCC4Q92889 916 aaPredicted RBP15.97■□□□□ 0.15
SGCE-204ENST00000428696 CCDC51Q96ER9 411 aa15.97■□□□□ 0.15
SGCE-204ENST00000428696 ZBTB45Q96K62 511 aaPredicted RBP15.97■□□□□ 0.15
SGCE-204ENST00000428696 KLK14Q9P0G3 267 aa15.97■□□□□ 0.15
SGCE-204ENST00000428696 GDAQ9Y2T3 454 aa15.97■□□□□ 0.15
SGCE-204ENST00000428696 IPPQ9Y573 584 aa15.97■□□□□ 0.15
SGCE-204ENST00000428696 LAMA3Q16787 3333 aa15.97■□□□□ 0.15
SGCE-204ENST00000428696 PVALEFA0A1B0GWK0 134 aa15.96■□□□□ 0.15
SGCE-204ENST00000428696 PRPF6O94906 941 aaKnown RBP15.96■□□□□ 0.15
SGCE-204ENST00000428696 CASP5P51878 434 aa15.96■□□□□ 0.15
SGCE-204ENST00000428696 PNOCQ13519 176 aa15.96■□□□□ 0.15
SGCE-204ENST00000428696 KMT5BQ4FZB7 885 aa15.96■□□□□ 0.15
SGCE-204ENST00000428696 FAM26FQ5R3K3 315 aa15.96■□□□□ 0.15
SGCE-204ENST00000428696 L1TD1Q5T7N2 865 aaKnown RBP15.96■□□□□ 0.15
SGCE-204ENST00000428696 GLB1LQ6UWU2 654 aa15.96■□□□□ 0.15
SGCE-204ENST00000428696 ACCSQ96QU6 501 aa15.96■□□□□ 0.15
SGCE-204ENST00000428696 FGFBP2Q9BYJ0 223 aa15.96■□□□□ 0.15
SGCE-204ENST00000428696 IKZF4Q9H2S9 585 aa15.96■□□□□ 0.15
SGCE-204ENST00000428696 NXF3Q9H4D5 531 aaKnown RBP15.96■□□□□ 0.15
SGCE-204ENST00000428696 ELAC1Q9H777 363 aaKnown RBP15.96■□□□□ 0.15
SGCE-204ENST00000428696 RNF19AQ9NV58 838 aa15.96■□□□□ 0.15
SGCE-204ENST00000428696 MEIS3P2A8K0S8 358 aa15.95■□□□□ 0.14
SGCE-204ENST00000428696 CLDN3O15551 220 aa15.95■□□□□ 0.14
SGCE-204ENST00000428696 HOXA2O43364 376 aa15.95■□□□□ 0.14
SGCE-204ENST00000428696 ABCB7O75027 752 aa15.95■□□□□ 0.14
SGCE-204ENST00000428696 ABCD1P33897 745 aa15.95■□□□□ 0.14
SGCE-204ENST00000428696 GTF2BQ00403 316 aa15.95■□□□□ 0.14
SGCE-204ENST00000428696 RNASELQ05823 741 aaKnown RBP15.95■□□□□ 0.14
SGCE-204ENST00000428696 NELFCDQ8IXH7 590 aa15.95■□□□□ 0.14
SGCE-204ENST00000428696 THNSL1Q8IYQ7 743 aa15.95■□□□□ 0.14
SGCE-204ENST00000428696 SMG8Q8ND04 991 aaKnown RBP15.95■□□□□ 0.14
SGCE-204ENST00000428696 GLIS3Q8NEA6 775 aa15.95■□□□□ 0.14
SGCE-204ENST00000428696 GBP3Q9H0R5 595 aa15.95■□□□□ 0.14
SGCE-204ENST00000428696 OLFML3Q9NRN5 406 aa15.95■□□□□ 0.14
SGCE-204ENST00000428696 SNTG2Q9NY99 539 aa15.95■□□□□ 0.14
SGCE-204ENST00000428696 EXOC7Q9UPT5 735 aa15.95■□□□□ 0.14
SGCE-204ENST00000428696 TNFSF13BQ9Y275 285 aa15.95■□□□□ 0.14
SGCE-204ENST00000428696 FRMD3A2A2Y4 597 aa15.94■□□□□ 0.14
SGCE-204ENST00000428696 ZNF623O75123 536 aa15.94■□□□□ 0.14
SGCE-204ENST00000428696 SMC2O95347 1197 aa15.94■□□□□ 0.14
SGCE-204ENST00000428696 MYL1P05976 194 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms