RNA–Protein interactions for RNA: ENST00000428546.2

KCNMA1-213, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-213ENST00000428546 RPS6KC1Q96S38 1066 aa12.71□□□□□ -0.37
KCNMA1-213ENST00000428546 GAD1Q99259 594 aa12.71□□□□□ -0.37
KCNMA1-213ENST00000428546 MMTAG2Q9BU76 263 aaKnown RBP12.71□□□□□ -0.37
KCNMA1-213ENST00000428546 NFKBIZQ9BYH8 718 aa12.71□□□□□ -0.37
KCNMA1-213ENST00000428546 ZHX3Q9H4I2 956 aa12.71□□□□□ -0.37
KCNMA1-213ENST00000428546 KMT5AQ9NQR1 393 aa12.71□□□□□ -0.37
KCNMA1-213ENST00000428546 KLK14Q9P0G3 267 aa12.71□□□□□ -0.37
KCNMA1-213ENST00000428546 USP20Q9Y2K6 914 aa12.71□□□□□ -0.37
KCNMA1-213ENST00000428546 VCANP13611 3396 aa12.7□□□□□ -0.38
KCNMA1-213ENST00000428546 SFI1A8K8P3 1242 aa12.7□□□□□ -0.38
KCNMA1-213ENST00000428546 PER2O15055 1255 aa12.7□□□□□ -0.38
KCNMA1-213ENST00000428546 LINC01565O15544 149 aa12.7□□□□□ -0.38
KCNMA1-213ENST00000428546 NCK2O43639 380 aa12.7□□□□□ -0.38
KCNMA1-213ENST00000428546 PLA2G4BP0C869 781 aa12.7□□□□□ -0.38
KCNMA1-213ENST00000428546 AKAP5P24588 427 aa12.7□□□□□ -0.38
KCNMA1-213ENST00000428546 TXLNAP40222 546 aa12.7□□□□□ -0.38
KCNMA1-213ENST00000428546 SCNN1GP51170 649 aa12.7□□□□□ -0.38
KCNMA1-213ENST00000428546 EFNA5P52803 228 aa12.7□□□□□ -0.38
KCNMA1-213ENST00000428546 ERVFC1P60507 584 aa12.7□□□□□ -0.38
KCNMA1-213ENST00000428546 CACNB1Q02641 598 aaPredicted RBP12.7□□□□□ -0.38
KCNMA1-213ENST00000428546 CAMK1Q14012 370 aa12.7□□□□□ -0.38
KCNMA1-213ENST00000428546 KARSQ15046 597 aaKnown RBP12.7□□□□□ -0.38
KCNMA1-213ENST00000428546 AMHR2Q16671 573 aa12.7□□□□□ -0.38
KCNMA1-213ENST00000428546 FOXD4L6Q3SYB3 417 aaPredicted RBP12.7□□□□□ -0.38
KCNMA1-213ENST00000428546 SPECC1Q5M775 1068 aa12.7□□□□□ -0.38
KCNMA1-213ENST00000428546 CDCA2Q69YH5 1023 aaPredicted RBP12.7□□□□□ -0.38
KCNMA1-213ENST00000428546 PTCRAQ6ISU1 281 aaPredicted RBP12.7□□□□□ -0.38
KCNMA1-213ENST00000428546 RINT1Q6NUQ1 792 aa12.7□□□□□ -0.38
KCNMA1-213ENST00000428546 FOXD4L3Q6VB84 417 aaPredicted RBP12.7□□□□□ -0.38
KCNMA1-213ENST00000428546 SLC39A11Q8N1S5 342 aa12.7□□□□□ -0.38
KCNMA1-213ENST00000428546 SMG8Q8ND04 991 aaKnown RBP12.7□□□□□ -0.38
KCNMA1-213ENST00000428546 SNX21Q969T3 373 aa12.7□□□□□ -0.38
KCNMA1-213ENST00000428546 PRIMPOLQ96LW4 560 aa12.7□□□□□ -0.38
KCNMA1-213ENST00000428546 RNF39Q9H2S5 420 aa12.7□□□□□ -0.38
KCNMA1-213ENST00000428546 NRDE2Q9H7Z3 1164 aa12.7□□□□□ -0.38
KCNMA1-213ENST00000428546 UBN1Q9NPG3 1134 aa12.7□□□□□ -0.38
KCNMA1-213ENST00000428546 KANSL3Q9P2N6 904 aa12.7□□□□□ -0.38
KCNMA1-213ENST00000428546 DNAJB4Q9UDY4 337 aa12.7□□□□□ -0.38
KCNMA1-213ENST00000428546 MTMR6Q9Y217 621 aa12.7□□□□□ -0.38
KCNMA1-213ENST00000428546 PRG3Q9Y2Y8 225 aaPredicted RBP12.7□□□□□ -0.38
KCNMA1-213ENST00000428546 CITO14578 2027 aa12.69□□□□□ -0.38
KCNMA1-213ENST00000428546 NPHP3-ACAD11A0A0J9YXS1 232 aa12.69□□□□□ -0.38
KCNMA1-213ENST00000428546 ARL5CA6NH57 179 aa12.69□□□□□ -0.38
KCNMA1-213ENST00000428546 K7ERI5 159 aa12.69□□□□□ -0.38
KCNMA1-213ENST00000428546 SLC16A4O15374 487 aa12.69□□□□□ -0.38
KCNMA1-213ENST00000428546 NR1I2O75469 434 aa12.69□□□□□ -0.38
KCNMA1-213ENST00000428546 SRGAP2BP0DMP2 458 aa12.69□□□□□ -0.38
KCNMA1-213ENST00000428546 HARSP12081 509 aaKnown RBP12.69□□□□□ -0.38
KCNMA1-213ENST00000428546 LONP1P36776 959 aaKnown RBP12.69□□□□□ -0.38
KCNMA1-213ENST00000428546 MATR3P43243 847 aaKnown RBP eCLIP12.69□□□□□ -0.38
KCNMA1-213ENST00000428546 OR1G1P47890 313 aa12.69□□□□□ -0.38
KCNMA1-213ENST00000428546 PLCB3Q01970 1234 aa12.69□□□□□ -0.38
KCNMA1-213ENST00000428546 GRIN1Q05586 938 aa12.69□□□□□ -0.38
KCNMA1-213ENST00000428546 SMC1AQ14683 1233 aaKnown RBP12.69□□□□□ -0.38
KCNMA1-213ENST00000428546 STK38Q15208 465 aa12.69□□□□□ -0.38
KCNMA1-213ENST00000428546 LLGL2Q6P1M3 1020 aa12.69□□□□□ -0.38
KCNMA1-213ENST00000428546 APBB1IPQ7Z5R6 666 aaPredicted RBP12.69□□□□□ -0.38
KCNMA1-213ENST00000428546 MRPL10Q7Z7H8 261 aaKnown RBP12.69□□□□□ -0.38
KCNMA1-213ENST00000428546 GPBP1Q86WP2 473 aa12.69□□□□□ -0.38
KCNMA1-213ENST00000428546 ZNF280BQ86YH2 543 aa12.69□□□□□ -0.38
KCNMA1-213ENST00000428546 RSPH1Q8WYR4 309 aa12.69□□□□□ -0.38
KCNMA1-213ENST00000428546 ZFP42Q96MM3 310 aa12.69□□□□□ -0.38
KCNMA1-213ENST00000428546 PDZD7Q9H5P4 517 aa12.69□□□□□ -0.38
KCNMA1-213ENST00000428546 GDAQ9Y2T3 454 aa12.69□□□□□ -0.38
KCNMA1-213ENST00000428546 PHLPP2Q6ZVD8 1323 aa12.68□□□□□ -0.38
KCNMA1-213ENST00000428546 A0A1B0GUA9 196 aa12.68□□□□□ -0.38
KCNMA1-213ENST00000428546 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.68□□□□□ -0.38
KCNMA1-213ENST00000428546 SPDYE4A6NLX3 237 aa12.68□□□□□ -0.38
KCNMA1-213ENST00000428546 TTLL13PA6NNM8 815 aa12.68□□□□□ -0.38
KCNMA1-213ENST00000428546 ACKR2O00590 384 aa12.68□□□□□ -0.38
KCNMA1-213ENST00000428546 FAM13AO94988 1023 aa12.68□□□□□ -0.38
KCNMA1-213ENST00000428546 BMP1P13497 986 aa12.68□□□□□ -0.38
KCNMA1-213ENST00000428546 PLCG1P19174 1290 aa12.68□□□□□ -0.38
KCNMA1-213ENST00000428546 SSTR3P32745 418 aaPredicted RBP12.68□□□□□ -0.38
KCNMA1-213ENST00000428546 NPTX2P47972 431 aa12.68□□□□□ -0.38
KCNMA1-213ENST00000428546 SLC11A1P49279 550 aa12.68□□□□□ -0.38
KCNMA1-213ENST00000428546 AFF1P51825 1210 aaKnown RBP12.68□□□□□ -0.38
KCNMA1-213ENST00000428546 SMTNP53814 917 aa12.68□□□□□ -0.38
KCNMA1-213ENST00000428546 STRN3Q13033 797 aa12.68□□□□□ -0.38
KCNMA1-213ENST00000428546 LEXMQ3ZCV2 418 aa12.68□□□□□ -0.38
KCNMA1-213ENST00000428546 TMEM119Q4V9L6 283 aa12.68□□□□□ -0.38
KCNMA1-213ENST00000428546 ATF7IP2Q5U623 682 aa12.68□□□□□ -0.38
KCNMA1-213ENST00000428546 PDE12Q6L8Q7 609 aaKnown RBP12.68□□□□□ -0.38
KCNMA1-213ENST00000428546 PPP4R3CPQ6ZMV5 832 aa12.68□□□□□ -0.38
KCNMA1-213ENST00000428546 C1orf186Q6ZWK4 172 aa12.68□□□□□ -0.38
KCNMA1-213ENST00000428546 ZBTB33Q86T24 672 aa12.68□□□□□ -0.38
KCNMA1-213ENST00000428546 VPS52Q8N1B4 723 aa12.68□□□□□ -0.38
KCNMA1-213ENST00000428546 SYT2Q8N9I0 419 aaPredicted RBP12.68□□□□□ -0.38
KCNMA1-213ENST00000428546 AUTS2Q8WXX7 1259 aa12.68□□□□□ -0.38
KCNMA1-213ENST00000428546 BICD1Q96G01 975 aa12.68□□□□□ -0.38
KCNMA1-213ENST00000428546 TCHPQ9BT92 498 aa12.68□□□□□ -0.38
KCNMA1-213ENST00000428546 TIPINQ9BVW5 301 aa12.68□□□□□ -0.38
KCNMA1-213ENST00000428546 FZD8Q9H461 694 aa12.68□□□□□ -0.38
KCNMA1-213ENST00000428546 ZSCAN16Q9H4T2 348 aaPredicted RBP12.68□□□□□ -0.38
KCNMA1-213ENST00000428546 SNTG2Q9NY99 539 aa12.68□□□□□ -0.38
KCNMA1-213ENST00000428546 CCDC39Q9UFE4 941 aa12.68□□□□□ -0.38
KCNMA1-213ENST00000428546 BARX2Q9UMQ3 279 aaPredicted RBP12.68□□□□□ -0.38
KCNMA1-213ENST00000428546 FAM50BQ9Y247 325 aa12.68□□□□□ -0.38
KCNMA1-213ENST00000428546 LZTS1Q9Y250 596 aa12.68□□□□□ -0.38
KCNMA1-213ENST00000428546 FAN1Q9Y2M0 1017 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms