RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 LIG1P18858 919 aa18.4■□□□□ 0.54
VRK2-204ENST00000428021 DDIT3P35638 169 aa18.4■□□□□ 0.54
VRK2-204ENST00000428021 CACNB1Q02641 598 aaPredicted RBP18.4■□□□□ 0.54
VRK2-204ENST00000428021 DMP1Q13316 513 aaPredicted RBP18.4■□□□□ 0.54
VRK2-204ENST00000428021 DHX8Q14562 1220 aaKnown RBP18.4■□□□□ 0.54
VRK2-204ENST00000428021 CSPP1Q1MSJ5 1256 aa18.4■□□□□ 0.54
VRK2-204ENST00000428021 TIGD5Q53EQ6 642 aa18.4■□□□□ 0.54
VRK2-204ENST00000428021 EEF1DP3Q658K8 133 aa18.4■□□□□ 0.54
VRK2-204ENST00000428021 GPBP1Q86WP2 473 aa18.4■□□□□ 0.54
VRK2-204ENST00000428021 RASSF8Q8NHQ8 419 aa18.4■□□□□ 0.54
VRK2-204ENST00000428021 POF1BQ8WVV4 589 aa18.4■□□□□ 0.54
VRK2-204ENST00000428021 SPIRE2Q8WWL2 714 aa18.4■□□□□ 0.54
VRK2-204ENST00000428021 ZNF558Q96NG5 402 aa18.4■□□□□ 0.54
VRK2-204ENST00000428021 NXF3Q9H4D5 531 aaKnown RBP18.4■□□□□ 0.54
VRK2-204ENST00000428021 TMEM134Q9H6X4 195 aa18.4■□□□□ 0.54
VRK2-204ENST00000428021 NRDE2Q9H7Z3 1164 aa18.4■□□□□ 0.54
VRK2-204ENST00000428021 KMT5AQ9NQR1 393 aa18.4■□□□□ 0.54
VRK2-204ENST00000428021 ZDHHC9Q9Y397 364 aa18.4■□□□□ 0.54
VRK2-204ENST00000428021 K7ERI5 159 aa18.39■□□□□ 0.53
VRK2-204ENST00000428021 N4BP3O15049 544 aa18.39■□□□□ 0.53
VRK2-204ENST00000428021 SLC16A4O15374 487 aa18.39■□□□□ 0.53
VRK2-204ENST00000428021 PPP6R2O75170 966 aa18.39■□□□□ 0.53
VRK2-204ENST00000428021 PLS3P13797 630 aa18.39■□□□□ 0.53
VRK2-204ENST00000428021 IRS1P35568 1242 aa18.39■□□□□ 0.53
VRK2-204ENST00000428021 PLCB3Q01970 1234 aa18.39■□□□□ 0.53
VRK2-204ENST00000428021 SKIV2LQ15477 1246 aaKnown RBP18.39■□□□□ 0.53
VRK2-204ENST00000428021 TCEAL5Q5H9L2 206 aa18.39■□□□□ 0.53
VRK2-204ENST00000428021 ZNF280BQ86YH2 543 aa18.39■□□□□ 0.53
VRK2-204ENST00000428021 THNSL1Q8IYQ7 743 aa18.39■□□□□ 0.53
VRK2-204ENST00000428021 LARP4BQ92615 738 aaKnown RBP18.39■□□□□ 0.53
VRK2-204ENST00000428021 REEP2Q9BRK0 252 aa18.39■□□□□ 0.53
VRK2-204ENST00000428021 TRIM6Q9C030 488 aaPredicted RBP18.39■□□□□ 0.53
VRK2-204ENST00000428021 NSUN3Q9H649 340 aaKnown RBP18.39■□□□□ 0.53
VRK2-204ENST00000428021 UBN1Q9NPG3 1134 aa18.39■□□□□ 0.53
VRK2-204ENST00000428021 THEGQ9P2T0 379 aa18.39■□□□□ 0.53
VRK2-204ENST00000428021 RBM19Q9Y4C8 960 aaKnown RBP18.39■□□□□ 0.53
VRK2-204ENST00000428021 A0A087X0B3 334 aa18.38■□□□□ 0.53
VRK2-204ENST00000428021 ARL5CA6NH57 179 aa18.38■□□□□ 0.53
VRK2-204ENST00000428021 DDHD2O94830 711 aa18.38■□□□□ 0.53
VRK2-204ENST00000428021 BRD1O95696 1058 aa18.38■□□□□ 0.53
VRK2-204ENST00000428021 BCAR1P56945 870 aa18.38■□□□□ 0.53
VRK2-204ENST00000428021 UBE3AQ05086 875 aa18.38■□□□□ 0.53
VRK2-204ENST00000428021 GIT2Q14161 759 aa18.38■□□□□ 0.53
VRK2-204ENST00000428021 SLC39A11Q8N1S5 342 aa18.38■□□□□ 0.53
VRK2-204ENST00000428021 TMEM161BQ8NDZ6 487 aa18.38■□□□□ 0.53
VRK2-204ENST00000428021 GAD1Q99259 594 aa18.38■□□□□ 0.53
VRK2-204ENST00000428021 APOL6Q9BWW8 343 aa18.38■□□□□ 0.53
VRK2-204ENST00000428021 MIOSQ9NXC5 875 aa18.38■□□□□ 0.53
VRK2-204ENST00000428021 SPG21Q9NZD8 308 aa18.38■□□□□ 0.53
VRK2-204ENST00000428021 DNAJB4Q9UDY4 337 aa18.38■□□□□ 0.53
VRK2-204ENST00000428021 STK17AQ9UEE5 414 aa18.38■□□□□ 0.53
VRK2-204ENST00000428021 CCDC39Q9UFE4 941 aa18.38■□□□□ 0.53
VRK2-204ENST00000428021 ODF2LQ9ULJ1 636 aa18.38■□□□□ 0.53
VRK2-204ENST00000428021 GIT1Q9Y2X7 761 aa18.38■□□□□ 0.53
VRK2-204ENST00000428021 PHLPP2Q6ZVD8 1323 aa18.38■□□□□ 0.53
VRK2-204ENST00000428021 VCANP13611 3396 aa18.37■□□□□ 0.53
VRK2-204ENST00000428021 NT5C1B-RDH14C9J2C7 533 aa18.37■□□□□ 0.53
VRK2-204ENST00000428021 ZC3H11AO75152 810 aaKnown RBP eCLIP18.37■□□□□ 0.53
VRK2-204ENST00000428021 CSPG5O95196 566 aa18.37■□□□□ 0.53
VRK2-204ENST00000428021 POMCP01189 267 aa18.37■□□□□ 0.53
VRK2-204ENST00000428021 GALTP07902 379 aa18.37■□□□□ 0.53
VRK2-204ENST00000428021 AKAP5P24588 427 aa18.37■□□□□ 0.53
VRK2-204ENST00000428021 MLH1P40692 756 aa18.37■□□□□ 0.53
VRK2-204ENST00000428021 ZNF131P52739 623 aa18.37■□□□□ 0.53
VRK2-204ENST00000428021 ERVFC1P60507 584 aa18.37■□□□□ 0.53
VRK2-204ENST00000428021 TFF2Q03403 129 aa18.37■□□□□ 0.53
VRK2-204ENST00000428021 COL19A1Q14993 1142 aa18.37■□□□□ 0.53
VRK2-204ENST00000428021 AXDND1Q5T1B0 1012 aaPredicted RBP18.37■□□□□ 0.53
VRK2-204ENST00000428021 ATF7IP2Q5U623 682 aa18.37■□□□□ 0.53
VRK2-204ENST00000428021 RRAGBQ5VZM2 374 aa18.37■□□□□ 0.53
VRK2-204ENST00000428021 ATL3Q6DD88 541 aa18.37■□□□□ 0.53
VRK2-204ENST00000428021 TMEM173Q86WV6 379 aaPredicted RBP18.37■□□□□ 0.53
VRK2-204ENST00000428021 GSTCDQ8NEC7 633 aa18.37■□□□□ 0.53
VRK2-204ENST00000428021 URGCPQ8TCY9 931 aa18.37■□□□□ 0.53
VRK2-204ENST00000428021 ATXN2LQ8WWM7 1075 aaKnown RBP18.37■□□□□ 0.53
VRK2-204ENST00000428021 MRPS27Q92552 414 aaKnown RBP18.37■□□□□ 0.53
VRK2-204ENST00000428021 ZFP42Q96MM3 310 aa18.37■□□□□ 0.53
VRK2-204ENST00000428021 ACO2Q99798 780 aaKnown RBP18.37■□□□□ 0.53
VRK2-204ENST00000428021 PANK2Q9BZ23 570 aa18.37■□□□□ 0.53
VRK2-204ENST00000428021 KANSL3Q9P2N6 904 aa18.37■□□□□ 0.53
VRK2-204ENST00000428021 DAXXQ9UER7 740 aaPredicted RBP18.37■□□□□ 0.53
VRK2-204ENST00000428021 LZTS1Q9Y250 596 aa18.37■□□□□ 0.53
VRK2-204ENST00000428021 PCDHGC5Q9Y5F6 944 aa18.37■□□□□ 0.53
VRK2-204ENST00000428021 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.36■□□□□ 0.53
VRK2-204ENST00000428021 FSCN2O14926 492 aa18.36■□□□□ 0.53
VRK2-204ENST00000428021 MAPTP10636 758 aaKnown RBP18.36■□□□□ 0.53
VRK2-204ENST00000428021 PPM1AP35813 382 aa18.36■□□□□ 0.53
VRK2-204ENST00000428021 TXLNAP40222 546 aa18.36■□□□□ 0.53
VRK2-204ENST00000428021 ALDH7A1P49419 539 aaKnown RBP18.36■□□□□ 0.53
VRK2-204ENST00000428021 DNM1Q05193 864 aaKnown RBP18.36■□□□□ 0.53
VRK2-204ENST00000428021 RNASELQ05823 741 aaKnown RBP18.36■□□□□ 0.53
VRK2-204ENST00000428021 TMEM132AQ24JP5 1023 aa18.36■□□□□ 0.53
VRK2-204ENST00000428021 ADGRD2Q7Z7M1 963 aa18.36■□□□□ 0.53
VRK2-204ENST00000428021 HACE1Q8IYU2 909 aa18.36■□□□□ 0.53
VRK2-204ENST00000428021 BCL7CQ8WUZ0 217 aaPredicted RBP18.36■□□□□ 0.53
VRK2-204ENST00000428021 KCNN1Q92952 543 aa18.36■□□□□ 0.53
VRK2-204ENST00000428021 HLA-CQ95604 372 aa18.36■□□□□ 0.53
VRK2-204ENST00000428021 GBP3Q9H0R5 595 aa18.36■□□□□ 0.53
VRK2-204ENST00000428021 PTPRHQ9HD43 1115 aa18.36■□□□□ 0.53
VRK2-204ENST00000428021 KCNG1Q9UIX4 513 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms