RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 MKL1Q969V6 931 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 NLNQ9BYT8 704 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 UPF3AQ9H1J1 476 aaKnown RBP6.08□□□□□ -1.44
HERC4-206ENST00000427635 OSBPL2Q9H1P3 480 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 SENP2Q9HC62 589 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 CYP26B1Q9NR63 512 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 PACSIN2Q9UNF0 486 aaPredicted RBP6.08□□□□□ -1.44
HERC4-206ENST00000427635 UBE4BO95155 1302 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 IQANK1A0A1B0GTG1 560 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 M0QYV0 167 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 E2F6O75461 281 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 CDK8P49336 464 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 MXI1P50539 228 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 NCKAP1LP55160 1127 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 DYNLL1P63167 89 aaKnown RBP6.08□□□□□ -1.44
HERC4-206ENST00000427635 IRX1P78414 480 aaPredicted RBP6.08□□□□□ -1.44
HERC4-206ENST00000427635 UBE3CQ15386 1083 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 SAMD3Q8N6K7 520 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 B4GALNT2Q8NHY0 566 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 OSCP1Q8WVF1 389 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 RIN2Q8WYP3 895 aaPredicted RBP6.08□□□□□ -1.44
HERC4-206ENST00000427635 IGFLR1Q9H665 355 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 KRCC1Q9NPI7 259 aaPredicted RBP6.08□□□□□ -1.44
HERC4-206ENST00000427635 CACNA2D2Q9NY47 1150 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 FAM135BQ49AJ0 1406 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 ABCC2Q92887 1545 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 NDUFAB1O14561 156 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 CFLARO15519 480 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 SGSM2O43147 1006 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 URODP06132 367 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 SCARF1Q14162 830 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 CTTNQ14247 550 aaKnown RBP6.08□□□□□ -1.44
HERC4-206ENST00000427635 IL31Q6EBC2 164 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 POTEDQ86YR6 584 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 CLYBLQ8N0X4 340 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 PAWRQ96IZ0 340 aaKnown RBP6.08□□□□□ -1.44
HERC4-206ENST00000427635 DPH5Q9H2P9 285 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 TMEM39AQ9NV64 488 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 ZNRF3Q9ULT6 936 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.08□□□□□ -1.44
HERC4-206ENST00000427635 SPATA31A6Q5VVP1 1343 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 ABCC12Q96J65 1359 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 THOC2Q8NI27 1593 aaKnown RBP6.08□□□□□ -1.44
HERC4-206ENST00000427635 C17orf102A2RUQ5 167 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 RNASEH2AO75792 299 aaKnown RBP6.08□□□□□ -1.44
HERC4-206ENST00000427635 SLC25A27O95847 323 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 CYP2E1P05181 493 aaPredicted RBP6.08□□□□□ -1.44
HERC4-206ENST00000427635 SUPT20HL2P0C7V6 817 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 LIG3P49916 1009 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 ADKP55263 362 aaKnown RBP6.08□□□□□ -1.44
HERC4-206ENST00000427635 PNOCQ13519 176 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 KCNB1Q14721 858 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 DGKDQ16760 1214 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 C20orf194Q5TEA3 1177 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 PLEKHM2Q8IWE5 1019 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 TBCKQ8TEA7 893 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 RRAGCQ9HB90 399 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 PAPOLBQ9NRJ5 636 aaKnown RBP6.08□□□□□ -1.44
HERC4-206ENST00000427635 PCDHA6Q9UN73 950 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 PCDHA8Q9Y5H6 950 aa6.08□□□□□ -1.44
HERC4-206ENST00000427635 LRRD1A4D1F6 860 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 CFAP99D6REC4 459 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 TJP3O95049 919 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 ZFXP17010 805 aaPredicted RBP6.07□□□□□ -1.44
HERC4-206ENST00000427635 EEF1B2P24534 225 aaKnown RBP6.07□□□□□ -1.44
HERC4-206ENST00000427635 TBXAS1P24557 533 aaPredicted RBP6.07□□□□□ -1.44
HERC4-206ENST00000427635 NT5C2P49902 561 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 AP3M2P53677 418 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 RCN2Q14257 317 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 PDIA6Q15084 440 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 GLYCTKQ8IVS8 523 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 NEK9Q8TD19 979 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 POLR3FQ9H1D9 316 aaPredicted RBP6.07□□□□□ -1.44
HERC4-206ENST00000427635 TXLNGQ9NUQ3 528 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 SCOCQ9UIL1 159 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 GOLGA8IPA6NC78 632 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 KPNA7A9QM74 516 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 PSMD14O00487 310 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 HSPA4LO95757 839 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 KRT14P02533 472 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 CALB1P05937 261 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 KCNQ4P56696 695 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 RALGDSQ12967 914 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 UBE2SQ16763 222 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 HIST2H2ACQ16777 129 aaPredicted RBP6.07□□□□□ -1.44
HERC4-206ENST00000427635 KRT24Q2M2I5 525 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 HIST2H2AA3Q6FI13 130 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 FAM47EQ6ZV65 393 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 SNX31Q8N9S9 440 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 PCSK9Q8NBP7 692 aaKnown RBP6.07□□□□□ -1.44
HERC4-206ENST00000427635 UHMK1Q8TAS1 419 aaKnown RBP6.07□□□□□ -1.44
HERC4-206ENST00000427635 DTNBP1Q96EV8 351 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 PLEKHA5Q9HAU0 1116 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 DMAP1Q9NPF5 467 aaPredicted RBP6.07□□□□□ -1.44
HERC4-206ENST00000427635 FAM217BQ9NTX9 383 aaPredicted RBP6.07□□□□□ -1.44
HERC4-206ENST00000427635 GCNT4Q9P109 453 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 FRMD3A2A2Y4 597 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 LZTS3O60299 673 aaPredicted RBP6.07□□□□□ -1.44
HERC4-206ENST00000427635 MTA2O94776 668 aa6.07□□□□□ -1.44
HERC4-206ENST00000427635 HMBSP08397 361 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms