RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 FAN1Q9Y2M0 1017 aa13.99□□□□□ -0.17
SPG11-202ENST00000427534 GOLGA8RI6L899 631 aa13.99□□□□□ -0.17
SPG11-202ENST00000427534 ZNF235Q14590 738 aa13.99□□□□□ -0.17
SPG11-202ENST00000427534 PPM1NQ8N819 430 aa13.99□□□□□ -0.17
SPG11-202ENST00000427534 CLTCL1P53675 1640 aa13.99□□□□□ -0.17
SPG11-202ENST00000427534 CTNND1O60716 968 aaKnown RBP13.99□□□□□ -0.17
SPG11-202ENST00000427534 E2F6O75461 281 aa13.99□□□□□ -0.17
SPG11-202ENST00000427534 AKT1P31749 480 aa13.99□□□□□ -0.17
SPG11-202ENST00000427534 TMPRSS15P98073 1019 aa13.99□□□□□ -0.17
SPG11-202ENST00000427534 ALKBH5Q6P6C2 394 aaKnown RBP13.99□□□□□ -0.17
SPG11-202ENST00000427534 IGFLR1Q9H665 355 aa13.99□□□□□ -0.17
SPG11-202ENST00000427534 CDHR2Q9BYE9 1310 aa13.99□□□□□ -0.17
SPG11-202ENST00000427534 PRKCBP05771 671 aa13.99□□□□□ -0.17
SPG11-202ENST00000427534 NT5C2P49902 561 aa13.99□□□□□ -0.17
SPG11-202ENST00000427534 SURF1Q15526 300 aa13.99□□□□□ -0.17
SPG11-202ENST00000427534 FAM180AQ6UWF9 173 aa13.99□□□□□ -0.17
SPG11-202ENST00000427534 GIMAP8Q8ND71 665 aaPredicted RBP13.99□□□□□ -0.17
SPG11-202ENST00000427534 ACSF2Q96CM8 615 aaPredicted RBP13.99□□□□□ -0.17
SPG11-202ENST00000427534 FAM84BQ96KN1 310 aaPredicted RBP13.99□□□□□ -0.17
SPG11-202ENST00000427534 KIFC3Q9BVG8 833 aa13.99□□□□□ -0.17
SPG11-202ENST00000427534 KLC2Q9H0B6 622 aa13.99□□□□□ -0.17
SPG11-202ENST00000427534 ASNSD1Q9NWL6 643 aa13.99□□□□□ -0.17
SPG11-202ENST00000427534 LDHAP00338 332 aaKnown RBP13.99□□□□□ -0.17
SPG11-202ENST00000427534 CA4P22748 312 aa13.99□□□□□ -0.17
SPG11-202ENST00000427534 PRAMEP78395 509 aa13.99□□□□□ -0.17
SPG11-202ENST00000427534 KIZQ2M2Z5 673 aa13.99□□□□□ -0.17
SPG11-202ENST00000427534 RESP18Q5W5W9 173 aa13.99□□□□□ -0.17
SPG11-202ENST00000427534 TBC1D16Q8TBP0 767 aa13.99□□□□□ -0.17
SPG11-202ENST00000427534 INTS2Q9H0H0 1204 aaKnown RBP13.99□□□□□ -0.17
SPG11-202ENST00000427534 JPH1Q9HDC5 661 aaPredicted RBP13.99□□□□□ -0.17
SPG11-202ENST00000427534 MAP3K20Q9NYL2 800 aaKnown RBP13.99□□□□□ -0.17
SPG11-202ENST00000427534 EPS15L1Q9UBC2 864 aa13.99□□□□□ -0.17
SPG11-202ENST00000427534 PHLPP2Q6ZVD8 1323 aa13.99□□□□□ -0.17
SPG11-202ENST00000427534 TJP3O95049 919 aa13.99□□□□□ -0.17
SPG11-202ENST00000427534 RFX3P48380 749 aa13.99□□□□□ -0.17
SPG11-202ENST00000427534 CENPAP49450 140 aa13.99□□□□□ -0.17
SPG11-202ENST00000427534 STAT5BP51692 787 aa13.99□□□□□ -0.17
SPG11-202ENST00000427534 RWDD2BP57060 319 aa13.99□□□□□ -0.17
SPG11-202ENST00000427534 KCNH2Q12809 1159 aa13.99□□□□□ -0.17
SPG11-202ENST00000427534 CERKQ8TCT0 537 aa13.99□□□□□ -0.17
SPG11-202ENST00000427534 AGO2Q9UKV8 859 aaKnown RBP13.99□□□□□ -0.17
SPG11-202ENST00000427534 EMSYQ7Z589 1322 aa13.98□□□□□ -0.17
SPG11-202ENST00000427534 HLA-DPA1P20036 260 aa13.98□□□□□ -0.17
SPG11-202ENST00000427534 ZBED6P86452 979 aa13.98□□□□□ -0.17
SPG11-202ENST00000427534 CCDC85BQ15834 202 aaPredicted RBP13.98□□□□□ -0.17
SPG11-202ENST00000427534 TAF1BQ53T94 588 aaPredicted RBP13.98□□□□□ -0.17
SPG11-202ENST00000427534 XXYLT1Q8NBI6 393 aa13.98□□□□□ -0.17
SPG11-202ENST00000427534 ZMYND12Q9H0C1 365 aa13.98□□□□□ -0.17
SPG11-202ENST00000427534 MED4Q9NPJ6 270 aa13.98□□□□□ -0.17
SPG11-202ENST00000427534 PPP1R9AQ9ULJ8 1098 aa13.98□□□□□ -0.17
SPG11-202ENST00000427534 AK9Q5TCS8 1911 aa13.98□□□□□ -0.17
SPG11-202ENST00000427534 CYP26A1O43174 497 aa13.98□□□□□ -0.17
SPG11-202ENST00000427534 GPS1Q13098 491 aa13.98□□□□□ -0.17
SPG11-202ENST00000427534 LRRC14Q15048 493 aa13.98□□□□□ -0.17
SPG11-202ENST00000427534 ENTPD7Q9NQZ7 604 aa13.98□□□□□ -0.17
SPG11-202ENST00000427534 DCTN4Q9UJW0 460 aa13.98□□□□□ -0.17
SPG11-202ENST00000427534 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.98□□□□□ -0.17
SPG11-202ENST00000427534 RPS6KA5O75582 802 aa13.98□□□□□ -0.17
SPG11-202ENST00000427534 SDC4P31431 198 aa13.98□□□□□ -0.17
SPG11-202ENST00000427534 PFKFB3Q16875 520 aaPredicted RBP13.98□□□□□ -0.17
SPG11-202ENST00000427534 SYTL3Q4VX76 610 aa13.98□□□□□ -0.17
SPG11-202ENST00000427534 LY9Q9HBG7 655 aa13.98□□□□□ -0.17
SPG11-202ENST00000427534 FBXO40Q9UH90 709 aa13.98□□□□□ -0.17
SPG11-202ENST00000427534 EIF3CLB5ME19 914 aaKnown RBP13.98□□□□□ -0.17
SPG11-202ENST00000427534 PGK2P07205 417 aa13.98□□□□□ -0.17
SPG11-202ENST00000427534 PHLDB3Q6NSJ2 640 aa13.98□□□□□ -0.17
SPG11-202ENST00000427534 PABPC5Q96DU9 382 aaKnown RBP13.98□□□□□ -0.17
SPG11-202ENST00000427534 EIF3CQ99613 913 aaKnown RBP13.98□□□□□ -0.17
SPG11-202ENST00000427534 CAPN11Q9UMQ6 739 aa13.98□□□□□ -0.17
SPG11-202ENST00000427534 NDUFA10O95299 355 aa13.98□□□□□ -0.17
SPG11-202ENST00000427534 THPOP40225 353 aa13.98□□□□□ -0.17
SPG11-202ENST00000427534 SNAPC2Q13487 334 aa13.98□□□□□ -0.17
SPG11-202ENST00000427534 GNASQ5JWF2 1037 aa13.98□□□□□ -0.17
SPG11-202ENST00000427534 CENPUQ71F23 418 aa13.98□□□□□ -0.17
SPG11-202ENST00000427534 AGBL1Q96MI9 1066 aa13.98□□□□□ -0.17
SPG11-202ENST00000427534 ATP11BQ9Y2G3 1177 aa13.98□□□□□ -0.17
SPG11-202ENST00000427534 TRPM1Q7Z4N2 1603 aa13.98□□□□□ -0.17
SPG11-202ENST00000427534 ESYT3A0FGR9 886 aa13.97□□□□□ -0.17
SPG11-202ENST00000427534 RALAP11233 206 aa13.97□□□□□ -0.17
SPG11-202ENST00000427534 EPB42P16452 691 aa13.97□□□□□ -0.17
SPG11-202ENST00000427534 PBLDP30039 288 aaPredicted RBP13.97□□□□□ -0.17
SPG11-202ENST00000427534 WDR72Q3MJ13 1102 aa13.97□□□□□ -0.17
SPG11-202ENST00000427534 FASTKD1Q53R41 847 aaKnown RBP13.97□□□□□ -0.17
SPG11-202ENST00000427534 PPHLN1Q8NEY8 458 aaKnown RBP13.97□□□□□ -0.17
SPG11-202ENST00000427534 ZNF564Q8TBZ8 553 aaPredicted RBP13.97□□□□□ -0.17
SPG11-202ENST00000427534 BCAR1P56945 870 aa13.97□□□□□ -0.17
SPG11-202ENST00000427534 APBA1Q02410 837 aa13.97□□□□□ -0.17
SPG11-202ENST00000427534 MAP3K21Q5TCX8 1036 aa13.97□□□□□ -0.17
SPG11-202ENST00000427534 SLC26A7Q8TE54 656 aa13.97□□□□□ -0.17
SPG11-202ENST00000427534 SESN2P58004 480 aaPredicted RBP13.97□□□□□ -0.17
SPG11-202ENST00000427534 NNTQ13423 1086 aa13.97□□□□□ -0.17
SPG11-202ENST00000427534 DRAP1Q14919 205 aaPredicted RBP13.97□□□□□ -0.17
SPG11-202ENST00000427534 SPDYAQ5MJ70 313 aa13.97□□□□□ -0.17
SPG11-202ENST00000427534 TRAIPQ9BWF2 469 aa13.97□□□□□ -0.17
SPG11-202ENST00000427534 HDAC6Q9UBN7 1215 aa13.97□□□□□ -0.17
SPG11-202ENST00000427534 FAM205CA6NFA0 338 aa13.97□□□□□ -0.17
SPG11-202ENST00000427534 FTLP02792 175 aaPredicted RBP13.97□□□□□ -0.17
SPG11-202ENST00000427534 TAC1P20366 129 aa13.97□□□□□ -0.17
SPG11-202ENST00000427534 ATP6V1E1P36543 226 aa13.97□□□□□ -0.17
SPG11-202ENST00000427534 PPARGP37231 505 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms