RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 TMC2Q8TDI7 906 aa15.15■□□□□ 0.02
APOBEC3D-202ENST00000427494 SLC20A1Q8WUM9 679 aa15.15■□□□□ 0.02
APOBEC3D-202ENST00000427494 LMBR1Q8WVP7 490 aa15.15■□□□□ 0.02
APOBEC3D-202ENST00000427494 KAT5Q92993 513 aa15.15■□□□□ 0.02
APOBEC3D-202ENST00000427494 TMEM143Q96AN5 459 aa15.15■□□□□ 0.02
APOBEC3D-202ENST00000427494 MFSD14AQ96MC6 490 aa15.15■□□□□ 0.02
APOBEC3D-202ENST00000427494 FBXL18Q96ME1 805 aa15.15■□□□□ 0.02
APOBEC3D-202ENST00000427494 POP1Q99575 1024 aaKnown RBP15.15■□□□□ 0.02
APOBEC3D-202ENST00000427494 AGPAT1Q99943 283 aa15.15■□□□□ 0.02
APOBEC3D-202ENST00000427494 TMEM8AQ9HCN3 771 aa15.15■□□□□ 0.02
APOBEC3D-202ENST00000427494 TOPORSQ9NS56 1045 aaPredicted RBP15.15■□□□□ 0.02
APOBEC3D-202ENST00000427494 USP20Q9Y2K6 914 aa15.15■□□□□ 0.02
APOBEC3D-202ENST00000427494 CXCL11O14625 94 aa15.15■□□□□ 0.02
APOBEC3D-202ENST00000427494 CNMDO75829 334 aa15.15■□□□□ 0.02
APOBEC3D-202ENST00000427494 ABCB4P21439 1286 aa15.15■□□□□ 0.02
APOBEC3D-202ENST00000427494 ABCD1P33897 745 aa15.15■□□□□ 0.02
APOBEC3D-202ENST00000427494 USP8P40818 1118 aa15.15■□□□□ 0.02
APOBEC3D-202ENST00000427494 CASP8Q14790 479 aa15.15■□□□□ 0.02
APOBEC3D-202ENST00000427494 PTPROQ16827 1216 aa15.15■□□□□ 0.02
APOBEC3D-202ENST00000427494 CTNNBL1Q8WYA6 563 aaPredicted RBP15.15■□□□□ 0.02
APOBEC3D-202ENST00000427494 SEMA4DQ92854 862 aa15.15■□□□□ 0.02
APOBEC3D-202ENST00000427494 SIP14410 1827 aa15.14■□□□□ 0.01
APOBEC3D-202ENST00000427494 FAM170AA1A519 330 aa15.14■□□□□ 0.01
APOBEC3D-202ENST00000427494 SPDYE5A6NIY4 337 aa15.14■□□□□ 0.01
APOBEC3D-202ENST00000427494 KCNK3O14649 394 aa15.14■□□□□ 0.01
APOBEC3D-202ENST00000427494 FARP2O94887 1054 aaPredicted RBP15.14■□□□□ 0.01
APOBEC3D-202ENST00000427494 TNNT3P45378 269 aaPredicted RBP15.14■□□□□ 0.01
APOBEC3D-202ENST00000427494 LIG4P49917 911 aa15.14■□□□□ 0.01
APOBEC3D-202ENST00000427494 MRPS25P82663 173 aaKnown RBP15.14■□□□□ 0.01
APOBEC3D-202ENST00000427494 C8orf74Q6P047 294 aa15.14■□□□□ 0.01
APOBEC3D-202ENST00000427494 USP37Q86T82 979 aa15.14■□□□□ 0.01
APOBEC3D-202ENST00000427494 GSPT2Q8IYD1 628 aaKnown RBP15.14■□□□□ 0.01
APOBEC3D-202ENST00000427494 SYCE1Q8N0S2 351 aa15.14■□□□□ 0.01
APOBEC3D-202ENST00000427494 PPM1KQ8N3J5 372 aa15.14■□□□□ 0.01
APOBEC3D-202ENST00000427494 ASAP3Q8TDY4 903 aa15.14■□□□□ 0.01
APOBEC3D-202ENST00000427494 HDAC7Q8WUI4 952 aa15.14■□□□□ 0.01
APOBEC3D-202ENST00000427494 RFFLQ8WZ73 363 aa15.14■□□□□ 0.01
APOBEC3D-202ENST00000427494 RUBCNQ92622 972 aa15.14■□□□□ 0.01
APOBEC3D-202ENST00000427494 FAM213AQ9BRX8 229 aa15.14■□□□□ 0.01
APOBEC3D-202ENST00000427494 TAS2R14Q9NYV8 317 aa15.14■□□□□ 0.01
APOBEC3D-202ENST00000427494 AGTPBP1Q9UPW5 1226 aa15.14■□□□□ 0.01
APOBEC3D-202ENST00000427494 IGKV6D-21A0A0A0MT36 114 aa15.13■□□□□ 0.01
APOBEC3D-202ENST00000427494 GSTTP1A0A1W2PQM5 241 aa15.13■□□□□ 0.01
APOBEC3D-202ENST00000427494 CES2O00748 559 aa15.13■□□□□ 0.01
APOBEC3D-202ENST00000427494 POLR3GO15318 223 aaPredicted RBP15.13■□□□□ 0.01
APOBEC3D-202ENST00000427494 STRN3Q13033 797 aa15.13■□□□□ 0.01
APOBEC3D-202ENST00000427494 NEDD9Q14511 834 aa15.13■□□□□ 0.01
APOBEC3D-202ENST00000427494 CCNI2Q6ZMN8 369 aaPredicted RBP15.13■□□□□ 0.01
APOBEC3D-202ENST00000427494 EEPD1Q7L9B9 569 aa15.13■□□□□ 0.01
APOBEC3D-202ENST00000427494 PEX26Q7Z412 305 aa15.13■□□□□ 0.01
APOBEC3D-202ENST00000427494 DAAM2Q86T65 1068 aa15.13■□□□□ 0.01
APOBEC3D-202ENST00000427494 PALB2Q86YC2 1186 aa15.13■□□□□ 0.01
APOBEC3D-202ENST00000427494 KREMEN1Q96MU8 473 aa15.13■□□□□ 0.01
APOBEC3D-202ENST00000427494 HINFPQ9BQA5 517 aa15.13■□□□□ 0.01
APOBEC3D-202ENST00000427494 PORCNQ9H237 461 aa15.13■□□□□ 0.01
APOBEC3D-202ENST00000427494 DHX33Q9H6R0 707 aaKnown RBP15.13■□□□□ 0.01
APOBEC3D-202ENST00000427494 PDE11AQ9HCR9 933 aa15.13■□□□□ 0.01
APOBEC3D-202ENST00000427494 KCNG1Q9UIX4 513 aa15.13■□□□□ 0.01
APOBEC3D-202ENST00000427494 LRRIQ4A6NIV6 560 aa15.13■□□□□ 0.01
APOBEC3D-202ENST00000427494 SLC25A27O95847 323 aa15.13■□□□□ 0.01
APOBEC3D-202ENST00000427494 MYBL2P10244 700 aa15.13■□□□□ 0.01
APOBEC3D-202ENST00000427494 DLATP10515 647 aaKnown RBP15.13■□□□□ 0.01
APOBEC3D-202ENST00000427494 YBX3P16989 372 aaKnown RBP eCLIP15.13■□□□□ 0.01
APOBEC3D-202ENST00000427494 GTF2H1P32780 548 aa15.13■□□□□ 0.01
APOBEC3D-202ENST00000427494 MFAP3P55082 362 aa15.13■□□□□ 0.01
APOBEC3D-202ENST00000427494 RNASE9P60153 205 aaKnown RBP15.13■□□□□ 0.01
APOBEC3D-202ENST00000427494 SLC7A5Q01650 507 aa15.13■□□□□ 0.01
APOBEC3D-202ENST00000427494 GPS2Q13227 327 aa15.13■□□□□ 0.01
APOBEC3D-202ENST00000427494 FAM160B1Q5W0V3 765 aa15.13■□□□□ 0.01
APOBEC3D-202ENST00000427494 SLFN11Q7Z7L1 901 aa15.13■□□□□ 0.01
APOBEC3D-202ENST00000427494 RPUSD2Q8IZ73 545 aaKnown RBP15.13■□□□□ 0.01
APOBEC3D-202ENST00000427494 MSL3Q8N5Y2 521 aaKnown RBP15.13■□□□□ 0.01
APOBEC3D-202ENST00000427494 FBXL13Q8NEE6 735 aa15.13■□□□□ 0.01
APOBEC3D-202ENST00000427494 DEPTORQ8TB45 409 aa15.13■□□□□ 0.01
APOBEC3D-202ENST00000427494 SLC35G2Q8TBE7 412 aa15.13■□□□□ 0.01
APOBEC3D-202ENST00000427494 SLC7A3Q8WY07 619 aa15.13■□□□□ 0.01
APOBEC3D-202ENST00000427494 PBKQ96KB5 322 aa15.13■□□□□ 0.01
APOBEC3D-202ENST00000427494 PCYT2Q99447 389 aa15.13■□□□□ 0.01
APOBEC3D-202ENST00000427494 NIFKQ9BYG3 293 aaKnown RBP15.13■□□□□ 0.01
APOBEC3D-202ENST00000427494 R3HDMLQ9H3Y0 253 aa15.13■□□□□ 0.01
APOBEC3D-202ENST00000427494 OSGEPQ9NPF4 335 aa15.13■□□□□ 0.01
APOBEC3D-202ENST00000427494 DMGDHQ9UI17 866 aaKnown RBP15.13■□□□□ 0.01
APOBEC3D-202ENST00000427494 KCNH4Q9UQ05 1017 aa15.13■□□□□ 0.01
APOBEC3D-202ENST00000427494 STXBP5LQ9Y2K9 1186 aa15.13■□□□□ 0.01
APOBEC3D-202ENST00000427494 COQ4Q9Y3A0 265 aa15.13■□□□□ 0.01
APOBEC3D-202ENST00000427494 UTRNP46939 3433 aa15.12■□□□□ 0.01
APOBEC3D-202ENST00000427494 ZNF233A6NK53 670 aa15.12■□□□□ 0.01
APOBEC3D-202ENST00000427494 SGPL1O95470 568 aa15.12■□□□□ 0.01
APOBEC3D-202ENST00000427494 GGPS1O95749 300 aa15.12■□□□□ 0.01
APOBEC3D-202ENST00000427494 GLRA2P23416 452 aa15.12■□□□□ 0.01
APOBEC3D-202ENST00000427494 GPC3P51654 580 aa15.12■□□□□ 0.01
APOBEC3D-202ENST00000427494 PPIL2Q13356 520 aa15.12■□□□□ 0.01
APOBEC3D-202ENST00000427494 LY6KQ17RY6 165 aa15.12■□□□□ 0.01
APOBEC3D-202ENST00000427494 TAS1R2Q8TE23 839 aa15.12■□□□□ 0.01
APOBEC3D-202ENST00000427494 ARHGEF26Q96DR7 871 aa15.12■□□□□ 0.01
APOBEC3D-202ENST00000427494 NT5C1BQ96P26 610 aa15.12■□□□□ 0.01
APOBEC3D-202ENST00000427494 SELENOOQ9BVL4 669 aa15.12■□□□□ 0.01
APOBEC3D-202ENST00000427494 THAP2Q9H0W7 228 aa15.12■□□□□ 0.01
APOBEC3D-202ENST00000427494 NRBP2Q9NSY0 501 aa15.12■□□□□ 0.01
APOBEC3D-202ENST00000427494 A0A0U1RQG5 324 aaPredicted RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms