RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 MTUS1Q9ULD2 1270 aa8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 ODF2LQ9ULJ1 636 aa8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 SYNGAP1Q96PV0 1343 aa8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 MIF4GDA9UHW6 222 aaKnown RBP8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 PODXLO00592 558 aa8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 PSMD10O75832 226 aa8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 POLR2MP0CAP2 368 aa8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 ECE1P42892 770 aa8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 VPS41P49754 854 aa8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 VAMP7P51809 220 aa8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 ADCY2Q08462 1091 aa8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 ADCY1Q08828 1119 aa8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 CALCOCO2Q13137 446 aa8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 KIF22Q14807 665 aa8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 FAM228AQ86W67 206 aa8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 CCDC63Q8NA47 563 aa8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 LXNQ9BS40 222 aa8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 KDM4CQ9H3R0 1056 aa8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 UNC45AQ9H3U1 944 aa8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 TDRD3Q9H7E2 651 aaKnown RBP8.1□□□□□ -1.11
SMARCC1-202ENST00000425518 RPSAP08865 295 aaKnown RBP8.09□□□□□ -1.11
SMARCC1-202ENST00000425518 RARAP10276 462 aa8.09□□□□□ -1.11
SMARCC1-202ENST00000425518 COILP38432 576 aaPredicted RBP8.09□□□□□ -1.11
SMARCC1-202ENST00000425518 LACTB2Q53H82 288 aaPredicted RBP8.09□□□□□ -1.11
SMARCC1-202ENST00000425518 ATXN2LQ8WWM7 1075 aaKnown RBP8.09□□□□□ -1.11
SMARCC1-202ENST00000425518 CENPTQ96BT3 561 aa8.09□□□□□ -1.11
SMARCC1-202ENST00000425518 DDX23Q9BUQ8 820 aaKnown RBP8.09□□□□□ -1.11
SMARCC1-202ENST00000425518 CLDN3O15551 220 aa8.09□□□□□ -1.11
SMARCC1-202ENST00000425518 RIPK2O43353 540 aa8.09□□□□□ -1.11
SMARCC1-202ENST00000425518 AGTP01019 485 aa8.09□□□□□ -1.11
SMARCC1-202ENST00000425518 EZRP15311 586 aaKnown RBP8.09□□□□□ -1.11
SMARCC1-202ENST00000425518 CREB1P16220 341 aa8.09□□□□□ -1.11
SMARCC1-202ENST00000425518 DRG2P55039 364 aaKnown RBP8.09□□□□□ -1.11
SMARCC1-202ENST00000425518 MAP2K1Q02750 393 aaPredicted RBP8.09□□□□□ -1.11
SMARCC1-202ENST00000425518 NEDD9Q14511 834 aa8.09□□□□□ -1.11
SMARCC1-202ENST00000425518 SLC15A2Q16348 729 aa8.09□□□□□ -1.11
SMARCC1-202ENST00000425518 CEP55Q53EZ4 464 aa8.09□□□□□ -1.11
SMARCC1-202ENST00000425518 PADI6Q6TGC4 694 aa8.09□□□□□ -1.11
SMARCC1-202ENST00000425518 FMNL3Q8IVF7 1028 aa8.09□□□□□ -1.11
SMARCC1-202ENST00000425518 LMO3Q8TAP4 145 aa8.09□□□□□ -1.11
SMARCC1-202ENST00000425518 ZNF622Q969S3 477 aaKnown RBP eCLIP8.09□□□□□ -1.111e-10■■□□□ 12.1
SMARCC1-202ENST00000425518 ZNF653Q96CK0 615 aa8.09□□□□□ -1.11
SMARCC1-202ENST00000425518 NUP85Q9BW27 656 aa8.09□□□□□ -1.11
SMARCC1-202ENST00000425518 SEL1LQ9UBV2 794 aa8.09□□□□□ -1.11
SMARCC1-202ENST00000425518 PARP2Q9UGN5 583 aa8.09□□□□□ -1.11
SMARCC1-202ENST00000425518 ASIC3Q9UHC3 531 aa8.09□□□□□ -1.11
SMARCC1-202ENST00000425518 USP21Q9UK80 565 aa8.09□□□□□ -1.11
SMARCC1-202ENST00000425518 FRMPD4Q14CM0 1322 aa8.09□□□□□ -1.11
SMARCC1-202ENST00000425518 COL5A3P25940 1745 aaPredicted RBP8.09□□□□□ -1.11
SMARCC1-202ENST00000425518 PPIP5K2O43314 1243 aa8.09□□□□□ -1.11
SMARCC1-202ENST00000425518 RTN2O75298 545 aa8.09□□□□□ -1.11
SMARCC1-202ENST00000425518 CYP3A4P08684 503 aa8.09□□□□□ -1.11
SMARCC1-202ENST00000425518 DLATP10515 647 aaKnown RBP8.09□□□□□ -1.11
SMARCC1-202ENST00000425518 AUHQ13825 339 aaKnown RBP8.09□□□□□ -1.11
SMARCC1-202ENST00000425518 PREPLQ4J6C6 727 aaPredicted RBP8.09□□□□□ -1.11
SMARCC1-202ENST00000425518 SLC47A2Q86VL8 602 aa8.09□□□□□ -1.11
SMARCC1-202ENST00000425518 COL23A1Q86Y22 540 aaPredicted RBP8.09□□□□□ -1.11
SMARCC1-202ENST00000425518 SLC13A5Q86YT5 568 aaPredicted RBP8.09□□□□□ -1.11
SMARCC1-202ENST00000425518 ZNF564Q8TBZ8 553 aaPredicted RBP8.09□□□□□ -1.11
SMARCC1-202ENST00000425518 ACER1Q8TDN7 264 aa8.09□□□□□ -1.11
SMARCC1-202ENST00000425518 N4BP2L2Q92802 583 aaPredicted RBP8.09□□□□□ -1.11
SMARCC1-202ENST00000425518 GMCL1Q96IK5 515 aa8.09□□□□□ -1.11
SMARCC1-202ENST00000425518 ZDHHC15Q96MV8 337 aa8.09□□□□□ -1.11
SMARCC1-202ENST00000425518 CALCAP01258 141 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 HSPA6P17066 643 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 ADRA2BP18089 450 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 PEX5P50542 639 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 STAT2P52630 851 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 ELF3P78545 371 aaPredicted RBP8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 XRCC4Q13426 336 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 RRP1BQ14684 758 aaKnown RBP8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 SLMAPQ14BN4 828 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 CLUL1Q15846 466 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 INTS8Q75QN2 995 aaKnown RBP8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 TRPM8Q7Z2W7 1104 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 NOP9Q86U38 636 aaKnown RBP8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 CCDC50Q8IVM0 306 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 DAW1Q8N136 415 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 GDAP1Q8TB36 358 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 ARHGEF2Q92974 986 aaKnown RBP8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 A1CFQ9NQ94 594 aaKnown RBP8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 ABCF3Q9NUQ8 709 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 PASKQ96RG2 1323 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 SRCAPQ6ZRS2 3230 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 TCP11X1B4DZS4 312 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 IPO5O00410 1097 aaKnown RBP8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 POLRMTO00411 1230 aaKnown RBP8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 ECEL1O95672 775 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 RARGP13631 454 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 MMP14P50281 582 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 ZKSCAN8Q15776 578 aaPredicted RBP8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 EPC2Q52LR7 807 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 SPDYCQ5MJ68 293 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 TAOK1Q7L7X3 1001 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 PIGWQ7Z7B1 504 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 EXOC3L1Q86VI1 746 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 SLC5A5Q92911 643 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 TEKT3Q9BXF9 490 aa8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 STMN4Q9H169 189 aaPredicted RBP8.08□□□□□ -1.12
SMARCC1-202ENST00000425518 LARSQ9P2J5 1176 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms