RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 TSHZ1Q6ZSZ6 1077 aa11.29□□□□□ -0.6
MDC1-205ENST00000425072 SERINC5Q86VE9 423 aa11.29□□□□□ -0.6
MDC1-205ENST00000425072 IRF2BP1Q8IU81 584 aa11.29□□□□□ -0.6
MDC1-205ENST00000425072 POMGNT1Q8WZA1 660 aa11.29□□□□□ -0.6
MDC1-205ENST00000425072 MRFAP1L1Q96HT8 127 aa11.29□□□□□ -0.6
MDC1-205ENST00000425072 ACO2Q99798 780 aaKnown RBP11.29□□□□□ -0.6
MDC1-205ENST00000425072 TUBGCP2Q9BSJ2 902 aa11.29□□□□□ -0.6
MDC1-205ENST00000425072 KIFC3Q9BVG8 833 aa11.29□□□□□ -0.6
MDC1-205ENST00000425072 CELF4Q9BZC1 486 aaKnown RBP11.29□□□□□ -0.6
MDC1-205ENST00000425072 CRISPLD2Q9H0B8 497 aa11.29□□□□□ -0.6
MDC1-205ENST00000425072 HSD3B7Q9H2F3 369 aa11.29□□□□□ -0.6
MDC1-205ENST00000425072 ADAMTS10Q9H324 1103 aa11.29□□□□□ -0.6
MDC1-205ENST00000425072 IFNKQ9P0W0 207 aa11.29□□□□□ -0.6
MDC1-205ENST00000425072 ARMCX3Q9UH62 379 aaPredicted RBP11.29□□□□□ -0.6
MDC1-205ENST00000425072 GRIN2DO15399 1336 aa11.29□□□□□ -0.6
MDC1-205ENST00000425072 ZNF233A6NK53 670 aa11.28□□□□□ -0.6
MDC1-205ENST00000425072 TLR3O15455 904 aaKnown RBP11.28□□□□□ -0.6
MDC1-205ENST00000425072 ERLIN2O94905 339 aa11.28□□□□□ -0.6
MDC1-205ENST00000425072 MYCP01106 439 aaPredicted RBP11.28□□□□□ -0.6
MDC1-205ENST00000425072 ATP1A3P13637 1013 aa11.28□□□□□ -0.6
MDC1-205ENST00000425072 POU5F1Q01860 360 aaKnown RBP11.28□□□□□ -0.6
MDC1-205ENST00000425072 ENPEPQ07075 957 aa11.28□□□□□ -0.6
MDC1-205ENST00000425072 KIZQ2M2Z5 673 aa11.28□□□□□ -0.6
MDC1-205ENST00000425072 HABP4Q5JVS0 413 aaKnown RBP11.28□□□□□ -0.6
MDC1-205ENST00000425072 LRRC55Q6ZSA7 311 aa11.28□□□□□ -0.6
MDC1-205ENST00000425072 INTS8Q75QN2 995 aaKnown RBP11.28□□□□□ -0.6
MDC1-205ENST00000425072 TAS1R3Q7RTX0 852 aa11.28□□□□□ -0.6
MDC1-205ENST00000425072 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.28□□□□□ -0.6
MDC1-205ENST00000425072 DRC7Q8IY82 874 aa11.28□□□□□ -0.6
MDC1-205ENST00000425072 CCDC155Q8N6L0 562 aa11.28□□□□□ -0.6
MDC1-205ENST00000425072 USP38Q8NB14 1042 aa11.28□□□□□ -0.6
MDC1-205ENST00000425072 U2AF1L4Q8WU68 220 aaKnown RBP11.28□□□□□ -0.6
MDC1-205ENST00000425072 ZBTB10Q96DT7 871 aa11.28□□□□□ -0.6
MDC1-205ENST00000425072 CNOT6LQ96LI5 555 aaKnown RBP11.28□□□□□ -0.6
MDC1-205ENST00000425072 NOC4LQ9BVI4 516 aaKnown RBP11.28□□□□□ -0.6
MDC1-205ENST00000425072 TARS2Q9BW92 718 aaKnown RBP11.28□□□□□ -0.6
MDC1-205ENST00000425072 CCDC113Q9H0I3 377 aa11.28□□□□□ -0.6
MDC1-205ENST00000425072 HSPBP1Q9NZL4 362 aa11.28□□□□□ -0.6
MDC1-205ENST00000425072 AGO2Q9UKV8 859 aaKnown RBP11.28□□□□□ -0.6
MDC1-205ENST00000425072 TNFSF13BQ9Y275 285 aa11.28□□□□□ -0.6
MDC1-205ENST00000425072 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.28□□□□□ -0.6
MDC1-205ENST00000425072 SQORQ9Y6N5 450 aa11.28□□□□□ -0.6
MDC1-205ENST00000425072 SZT2Q5T011 3432 aa11.28□□□□□ -0.6
MDC1-205ENST00000425072 MROH7Q68CQ1 1323 aa11.28□□□□□ -0.6
MDC1-205ENST00000425072 ADGRA3Q8IWK6 1321 aa11.28□□□□□ -0.6
MDC1-205ENST00000425072 A0A0B4J269 797 aa11.27□□□□□ -0.61
MDC1-205ENST00000425072 GOLGA6L6A8MZA4 724 aa11.27□□□□□ -0.61
MDC1-205ENST00000425072 ANKRD63C9JTQ0 380 aa11.27□□□□□ -0.61
MDC1-205ENST00000425072 STX10O60499 249 aa11.27□□□□□ -0.61
MDC1-205ENST00000425072 DARSP14868 501 aaKnown RBP11.27□□□□□ -0.61
MDC1-205ENST00000425072 SFPQP23246 707 aaKnown RBP eCLIP11.27□□□□□ -0.61
MDC1-205ENST00000425072 THPOP40225 353 aa11.27□□□□□ -0.61
MDC1-205ENST00000425072 GJA8P48165 433 aa11.27□□□□□ -0.61
MDC1-205ENST00000425072 CDK7P50613 346 aa11.27□□□□□ -0.61
MDC1-205ENST00000425072 CYP2J2P51589 502 aa11.27□□□□□ -0.61
MDC1-205ENST00000425072 ZNF75DP51815 510 aa11.27□□□□□ -0.61
MDC1-205ENST00000425072 COPB1P53618 953 aaKnown RBP11.27□□□□□ -0.61
MDC1-205ENST00000425072 MRPS6P82932 125 aaKnown RBP11.27□□□□□ -0.61
MDC1-205ENST00000425072 MBTD1Q05BQ5 628 aa11.27□□□□□ -0.61
MDC1-205ENST00000425072 CCDC173Q0VFZ6 552 aa11.27□□□□□ -0.61
MDC1-205ENST00000425072 HIC1Q14526 733 aa11.27□□□□□ -0.61
MDC1-205ENST00000425072 KRT31Q15323 416 aa11.27□□□□□ -0.61
MDC1-205ENST00000425072 SURF1Q15526 300 aa11.27□□□□□ -0.61
MDC1-205ENST00000425072 MAN2A1Q16706 1144 aa11.27□□□□□ -0.61
MDC1-205ENST00000425072 VWA3BQ502W6 1294 aa11.27□□□□□ -0.61
MDC1-205ENST00000425072 HSP90AA4PQ58FG1 418 aa11.27□□□□□ -0.61
MDC1-205ENST00000425072 FKBP15Q5T1M5 1219 aa11.27□□□□□ -0.61
MDC1-205ENST00000425072 ATF7IP2Q5U623 682 aa11.27□□□□□ -0.61
MDC1-205ENST00000425072 RUFY4Q6ZNE9 571 aa11.27□□□□□ -0.61
MDC1-205ENST00000425072 CATSPER4Q7RTX7 472 aa11.27□□□□□ -0.61
MDC1-205ENST00000425072 FAM186BQ8IYM0 893 aa11.27□□□□□ -0.61
MDC1-205ENST00000425072 GPD1LQ8N335 351 aa11.27□□□□□ -0.61
MDC1-205ENST00000425072 EEF2KMTQ96G04 330 aa11.27□□□□□ -0.61
MDC1-205ENST00000425072 ADPGKQ9BRR6 497 aa11.27□□□□□ -0.61
MDC1-205ENST00000425072 MSTO1Q9BUK6 570 aa11.27□□□□□ -0.61
MDC1-205ENST00000425072 SENP6Q9GZR1 1112 aaPredicted RBP11.27□□□□□ -0.61
MDC1-205ENST00000425072 VPS16Q9H269 839 aa11.27□□□□□ -0.61
MDC1-205ENST00000425072 PCIF1Q9H4Z3 704 aa11.27□□□□□ -0.61
MDC1-205ENST00000425072 GINS2Q9Y248 185 aa11.27□□□□□ -0.61
MDC1-205ENST00000425072 A0A1B0GTH6 734 aa11.26□□□□□ -0.61
MDC1-205ENST00000425072 A0A1B0GUA9 196 aa11.26□□□□□ -0.61
MDC1-205ENST00000425072 PES1O00541 588 aaKnown RBP11.26□□□□□ -0.61
MDC1-205ENST00000425072 GPR182O15218 404 aa11.26□□□□□ -0.61
MDC1-205ENST00000425072 EXTL3O43909 919 aa11.26□□□□□ -0.61
MDC1-205ENST00000425072 AKAP3O75969 853 aa11.26□□□□□ -0.61
MDC1-205ENST00000425072 CDC25BP30305 580 aa11.26□□□□□ -0.61
MDC1-205ENST00000425072 ADSSP30520 456 aa11.26□□□□□ -0.61
MDC1-205ENST00000425072 MCCD1P59942 119 aaPredicted RBP11.26□□□□□ -0.61
MDC1-205ENST00000425072 UBXN1Q04323 297 aa11.26□□□□□ -0.61
MDC1-205ENST00000425072 TMEM62Q0P6H9 643 aa11.26□□□□□ -0.61
MDC1-205ENST00000425072 CETN1Q12798 172 aa11.26□□□□□ -0.61
MDC1-205ENST00000425072 BFSP2Q13515 415 aa11.26□□□□□ -0.61
MDC1-205ENST00000425072 FAM26DQ5JW98 314 aa11.26□□□□□ -0.61
MDC1-205ENST00000425072 C1orf53Q5VUE5 145 aa11.26□□□□□ -0.61
MDC1-205ENST00000425072 MPZL3Q6UWV2 235 aa11.26□□□□□ -0.61
MDC1-205ENST00000425072 TRIM59Q8IWR1 403 aa11.26□□□□□ -0.61
MDC1-205ENST00000425072 RDH13Q8NBN7 331 aa11.26□□□□□ -0.61
MDC1-205ENST00000425072 FBXL18Q96ME1 805 aa11.26□□□□□ -0.61
MDC1-205ENST00000425072 TOX2Q96NM4 488 aa11.26□□□□□ -0.61
MDC1-205ENST00000425072 NAP1L5Q96NT1 182 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms