RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 ZNF496Q96IT1 587 aaPredicted RBP7.06□□□□□ -1.28
LINC01040-201ENST00000425048 AKIP1Q9NQ31 210 aa7.06□□□□□ -1.28
LINC01040-201ENST00000425048 ANKFY1Q9P2R3 1169 aa7.06□□□□□ -1.28
LINC01040-201ENST00000425048 KIAA0355O15063 1070 aa7.05□□□□□ -1.28
LINC01040-201ENST00000425048 SEC24DO94855 1032 aaPredicted RBP7.05□□□□□ -1.28
LINC01040-201ENST00000425048 IL12RB1P42701 662 aa7.05□□□□□ -1.28
LINC01040-201ENST00000425048 HNRNPA0Q13151 305 aaKnown RBP7.05□□□□□ -1.28
LINC01040-201ENST00000425048 PABPC4Q13310 644 aaKnown RBP eCLIP7.05□□□□□ -1.28
LINC01040-201ENST00000425048 CCDC178Q5BJE1 867 aa7.05□□□□□ -1.28
LINC01040-201ENST00000425048 SYCE2Q6PIF2 218 aa7.05□□□□□ -1.28
LINC01040-201ENST00000425048 Q6YL49 198 aa7.05□□□□□ -1.28
LINC01040-201ENST00000425048 NXPE1Q8N323 547 aa7.05□□□□□ -1.28
LINC01040-201ENST00000425048 MSRAQ9UJ68 235 aa7.05□□□□□ -1.28
LINC01040-201ENST00000425048 DIRC3C9JPN6 131 aa7.04□□□□□ -1.28
LINC01040-201ENST00000425048 ASMTLO95671 621 aa7.04□□□□□ -1.28
LINC01040-201ENST00000425048 PFKMP08237 780 aa7.04□□□□□ -1.28
LINC01040-201ENST00000425048 AVPR1BP47901 424 aa7.04□□□□□ -1.28
LINC01040-201ENST00000425048 NRG3P56975 720 aa7.04□□□□□ -1.28
LINC01040-201ENST00000425048 GPRIN1Q7Z2K8 1008 aa7.04□□□□□ -1.28
LINC01040-201ENST00000425048 XYLT1Q86Y38 959 aa7.04□□□□□ -1.28
LINC01040-201ENST00000425048 BBC3Q96PG8 261 aaPredicted RBP7.04□□□□□ -1.28
LINC01040-201ENST00000425048 SPON1Q9HCB6 807 aa7.04□□□□□ -1.28
LINC01040-201ENST00000425048 LEFTY2O00292 366 aa7.03□□□□□ -1.28
LINC01040-201ENST00000425048 NCR1O76036 304 aa7.03□□□□□ -1.28
LINC01040-201ENST00000425048 NDUFA10O95299 355 aa7.03□□□□□ -1.28
LINC01040-201ENST00000425048 NEK4P51957 841 aa7.03□□□□□ -1.28
LINC01040-201ENST00000425048 C21orf58P58505 322 aa7.03□□□□□ -1.28
LINC01040-201ENST00000425048 BMS1Q14692 1282 aaKnown RBP7.03□□□□□ -1.28
LINC01040-201ENST00000425048 LMBR1LQ6UX01 489 aa7.03□□□□□ -1.28
LINC01040-201ENST00000425048 SH3TC2Q8TF17 1288 aa7.03□□□□□ -1.28
LINC01040-201ENST00000425048 NTN5Q8WTR8 489 aaPredicted RBP7.03□□□□□ -1.28
LINC01040-201ENST00000425048 CHTF18Q8WVB6 975 aa7.03□□□□□ -1.28
LINC01040-201ENST00000425048 MRFAP1L1Q96HT8 127 aa7.03□□□□□ -1.28
LINC01040-201ENST00000425048 DNAJC2Q99543 621 aaKnown RBP7.03□□□□□ -1.28
LINC01040-201ENST00000425048 FDXACB1Q9BRP7 624 aaPredicted RBP7.03□□□□□ -1.28
LINC01040-201ENST00000425048 THG1LQ9NWX6 298 aaKnown RBP7.03□□□□□ -1.28
LINC01040-201ENST00000425048 A0A1W2PR48 441 aa7.02□□□□□ -1.29
LINC01040-201ENST00000425048 CD38P28907 300 aa7.02□□□□□ -1.29
LINC01040-201ENST00000425048 BMPR1AP36894 532 aa7.02□□□□□ -1.29
LINC01040-201ENST00000425048 APBA1Q02410 837 aa7.02□□□□□ -1.29
LINC01040-201ENST00000425048 DSG1Q02413 1049 aa7.02□□□□□ -1.29
LINC01040-201ENST00000425048 GPR158Q5T848 1215 aa7.02□□□□□ -1.29
LINC01040-201ENST00000425048 CCDC62Q6P9F0 684 aa7.02□□□□□ -1.29
LINC01040-201ENST00000425048 DRICH1Q6PGQ1 229 aaPredicted RBP7.02□□□□□ -1.29
LINC01040-201ENST00000425048 SYNPOQ8N3V7 929 aa7.02□□□□□ -1.29
LINC01040-201ENST00000425048 MSL3Q8N5Y2 521 aaKnown RBP7.02□□□□□ -1.29
LINC01040-201ENST00000425048 ADARB2Q9NS39 739 aaKnown RBP7.02□□□□□ -1.29
LINC01040-201ENST00000425048 DKK2Q9UBU2 259 aa7.02□□□□□ -1.29
LINC01040-201ENST00000425048 CHST2Q9Y4C5 530 aa7.02□□□□□ -1.29
LINC01040-201ENST00000425048 CLEC2LP0C7M8 214 aa7.01□□□□□ -1.29
LINC01040-201ENST00000425048 KPNA1P52294 538 aaPredicted RBP7.01□□□□□ -1.29
LINC01040-201ENST00000425048 RNASE9P60153 205 aaKnown RBP7.01□□□□□ -1.29
LINC01040-201ENST00000425048 NHLH2Q02577 135 aa7.01□□□□□ -1.29
LINC01040-201ENST00000425048 MGAT5Q09328 741 aa7.01□□□□□ -1.29
LINC01040-201ENST00000425048 UBE3CQ15386 1083 aa7.01□□□□□ -1.29
LINC01040-201ENST00000425048 BEAN1Q3B7T3 259 aa7.01□□□□□ -1.29
LINC01040-201ENST00000425048 ZBTB41Q5SVQ8 909 aa7.01□□□□□ -1.29
LINC01040-201ENST00000425048 PLXDC1Q8IUK5 500 aa7.01□□□□□ -1.29
LINC01040-201ENST00000425048 CMTR2Q8IYT2 770 aaKnown RBP7.01□□□□□ -1.29
LINC01040-201ENST00000425048 CAVIN3Q969G5 261 aa7.01□□□□□ -1.29
LINC01040-201ENST00000425048 COQ10AQ96MF6 247 aa7.01□□□□□ -1.29
LINC01040-201ENST00000425048 KANSL2Q9H9L4 492 aa7.01□□□□□ -1.29
LINC01040-201ENST00000425048 TMEM260Q9NX78 707 aa7.01□□□□□ -1.29
LINC01040-201ENST00000425048 SYBUQ9NX95 663 aa7.01□□□□□ -1.29
LINC01040-201ENST00000425048 NUMBLQ9Y6R0 609 aa7.01□□□□□ -1.29
LINC01040-201ENST00000425048 PRSS38A1L453 326 aa7□□□□□ -1.29
LINC01040-201ENST00000425048 ZNF891A8MT65 544 aaPredicted RBP7□□□□□ -1.29
LINC01040-201ENST00000425048 TGM5O43548 720 aa7□□□□□ -1.29
LINC01040-201ENST00000425048 KPNA6O60684 536 aa7□□□□□ -1.29
LINC01040-201ENST00000425048 ZSCAN20P17040 1043 aaPredicted RBP7□□□□□ -1.29
LINC01040-201ENST00000425048 POU3F2P20265 443 aaPredicted RBP7□□□□□ -1.29
LINC01040-201ENST00000425048 MGAT1P26572 445 aa7□□□□□ -1.29
LINC01040-201ENST00000425048 CLK3P49761 638 aaKnown RBP7□□□□□ -1.29
LINC01040-201ENST00000425048 ERCC6LQ2NKX8 1250 aa7□□□□□ -1.29
LINC01040-201ENST00000425048 RSAD2Q8WXG1 361 aa7□□□□□ -1.29
LINC01040-201ENST00000425048 CDC5LQ99459 802 aaKnown RBP7□□□□□ -1.29
LINC01040-201ENST00000425048 MTFR1LQ9H019 292 aa7□□□□□ -1.29
LINC01040-201ENST00000425048 KCNG1Q9UIX4 513 aa7□□□□□ -1.29
LINC01040-201ENST00000425048 EPN1Q9Y6I3 576 aaPredicted RBP7□□□□□ -1.29
LINC01040-201ENST00000425048 COX11Q9Y6N1 276 aa7□□□□□ -1.29
LINC01040-201ENST00000425048 HLA-DOAP06340 250 aa6.99□□□□□ -1.29
LINC01040-201ENST00000425048 LTA4HP09960 611 aaKnown RBP6.99□□□□□ -1.29
LINC01040-201ENST00000425048 HKR1P10072 659 aa6.99□□□□□ -1.29
LINC01040-201ENST00000425048 RBP3P10745 1247 aa6.99□□□□□ -1.29
LINC01040-201ENST00000425048 LSP1P33241 339 aa6.99□□□□□ -1.29
LINC01040-201ENST00000425048 GUCY1B3Q02153 619 aa6.99□□□□□ -1.29
LINC01040-201ENST00000425048 CSRP2Q16527 193 aa6.99□□□□□ -1.29
LINC01040-201ENST00000425048 EFCAB12Q6NXP0 572 aa6.99□□□□□ -1.29
LINC01040-201ENST00000425048 GLB1L2Q8IW92 636 aa6.99□□□□□ -1.29
LINC01040-201ENST00000425048 ZNF610Q8N9Z0 462 aa6.99□□□□□ -1.29
LINC01040-201ENST00000425048 POGKQ9P215 609 aa6.99□□□□□ -1.29
LINC01040-201ENST00000425048 PIPSLA2A3N6 862 aa6.98□□□□□ -1.29
LINC01040-201ENST00000425048 TBKBP1A7MCY6 615 aa6.98□□□□□ -1.29
LINC01040-201ENST00000425048 B5MCH6 92 aa6.98□□□□□ -1.29
LINC01040-201ENST00000425048 SPATA31D3P0C874 917 aa6.98□□□□□ -1.29
LINC01040-201ENST00000425048 PHC1P78364 1004 aa6.98□□□□□ -1.29
LINC01040-201ENST00000425048 SPATA31D4Q6ZUB0 917 aa6.98□□□□□ -1.29
LINC01040-201ENST00000425048 CPEB3Q8NE35 698 aaKnown RBP6.98□□□□□ -1.29
LINC01040-201ENST00000425048 OR10H5Q8NGA6 315 aa6.98□□□□□ -1.29
LINC01040-201ENST00000425048 LINC00476Q8WZB0 136 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms