RNA–Protein interactions for RNA: ENST00000424424.1

PRNP-202, Transcript of prion protein, humanhuman

TSL 1 (best)

Gene PRNP, Length 806 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-202ENST00000424424 PPP6R2O75170 966 aa20.59■□□□□ 0.89
PRNP-202ENST00000424424 FGF18O76093 207 aa20.59■□□□□ 0.89
PRNP-202ENST00000424424 NPTXRO95502 500 aa20.59■□□□□ 0.89
PRNP-202ENST00000424424 KRT18P05783 430 aaKnown RBP20.59■□□□□ 0.89
PRNP-202ENST00000424424 DDIT3P35638 169 aa20.59■□□□□ 0.89
PRNP-202ENST00000424424 ALDH7A1P49419 539 aaKnown RBP20.59■□□□□ 0.89
PRNP-202ENST00000424424 KRT17Q04695 432 aa20.59■□□□□ 0.89
PRNP-202ENST00000424424 MAPK7Q13164 816 aa20.59■□□□□ 0.89
PRNP-202ENST00000424424 MCM6Q14566 821 aa20.59■□□□□ 0.89
PRNP-202ENST00000424424 RRAGBQ5VZM2 374 aa20.59■□□□□ 0.89
PRNP-202ENST00000424424 ATL3Q6DD88 541 aa20.59■□□□□ 0.89
PRNP-202ENST00000424424 GPBP1Q86WP2 473 aa20.59■□□□□ 0.89
PRNP-202ENST00000424424 CDR2LQ86X02 465 aaPredicted RBP20.59■□□□□ 0.89
PRNP-202ENST00000424424 POF1BQ8WVV4 589 aa20.59■□□□□ 0.89
PRNP-202ENST00000424424 FAM193BQ96PV7 902 aaPredicted RBP20.59■□□□□ 0.89
PRNP-202ENST00000424424 NSUN3Q9H649 340 aaKnown RBP20.59■□□□□ 0.89
PRNP-202ENST00000424424 TMEM134Q9H6X4 195 aa20.59■□□□□ 0.89
PRNP-202ENST00000424424 BLOC1S4Q9NUP1 217 aa20.59■□□□□ 0.89
PRNP-202ENST00000424424 LARSQ9P2J5 1176 aaKnown RBP20.59■□□□□ 0.89
PRNP-202ENST00000424424 STK17AQ9UEE5 414 aa20.59■□□□□ 0.89
PRNP-202ENST00000424424 PUF60Q9UHX1 559 aaKnown RBP20.59■□□□□ 0.89
PRNP-202ENST00000424424 CFAP45Q9UL16 551 aa20.59■□□□□ 0.89
PRNP-202ENST00000424424 ODF2LQ9ULJ1 636 aa20.59■□□□□ 0.89
PRNP-202ENST00000424424 ATG2AQ2TAZ0 1938 aa20.59■□□□□ 0.89
PRNP-202ENST00000424424 PLS3P13797 630 aa20.58■□□□□ 0.89
PRNP-202ENST00000424424 FOXD4L6Q3SYB3 417 aaPredicted RBP20.58■□□□□ 0.89
PRNP-202ENST00000424424 FOXD4L3Q6VB84 417 aaPredicted RBP20.58■□□□□ 0.89
PRNP-202ENST00000424424 USP49Q70CQ1 688 aa20.58■□□□□ 0.89
PRNP-202ENST00000424424 APBB1IPQ7Z5R6 666 aaPredicted RBP20.58■□□□□ 0.89
PRNP-202ENST00000424424 PPP2R3CQ969Q6 453 aa20.58■□□□□ 0.89
PRNP-202ENST00000424424 APOL6Q9BWW8 343 aa20.58■□□□□ 0.89
PRNP-202ENST00000424424 TBC1D13Q9NVG8 400 aa20.58■□□□□ 0.89
PRNP-202ENST00000424424 SPG21Q9NZD8 308 aa20.58■□□□□ 0.89
PRNP-202ENST00000424424 COG5Q9UP83 839 aa20.58■□□□□ 0.89
PRNP-202ENST00000424424 H0YCG3 227 aa20.57■□□□□ 0.88
PRNP-202ENST00000424424 ZC3H11AO75152 810 aaKnown RBP eCLIP20.57■□□□□ 0.88
PRNP-202ENST00000424424 BCAR1P56945 870 aa20.57■□□□□ 0.88
PRNP-202ENST00000424424 PLCB3Q01970 1234 aa20.57■□□□□ 0.88
PRNP-202ENST00000424424 PKP1Q13835 747 aa20.57■□□□□ 0.88
PRNP-202ENST00000424424 ARSHQ5FYA8 562 aa20.57■□□□□ 0.88
PRNP-202ENST00000424424 CCDC73Q6ZRK6 1079 aa20.57■□□□□ 0.88
PRNP-202ENST00000424424 SPIRE2Q8WWL2 714 aa20.57■□□□□ 0.88
PRNP-202ENST00000424424 NTPCRQ9BSD7 190 aaKnown RBP20.57■□□□□ 0.88
PRNP-202ENST00000424424 PDZD7Q9H5P4 517 aa20.57■□□□□ 0.88
PRNP-202ENST00000424424 PRDM6Q9NQX0 595 aa20.57■□□□□ 0.88
PRNP-202ENST00000424424 ARHGAP28Q9P2N2 729 aa20.57■□□□□ 0.88
PRNP-202ENST00000424424 GIT1Q9Y2X7 761 aa20.57■□□□□ 0.88
PRNP-202ENST00000424424 HES2Q9Y543 173 aa20.57■□□□□ 0.88
PRNP-202ENST00000424424 NPHP3-ACAD11A0A0J9YXS1 232 aa20.56■□□□□ 0.88
PRNP-202ENST00000424424 SLC16A4O15374 487 aa20.56■□□□□ 0.88
PRNP-202ENST00000424424 FAM13AO94988 1023 aa20.56■□□□□ 0.88
PRNP-202ENST00000424424 CSPG5O95196 566 aa20.56■□□□□ 0.88
PRNP-202ENST00000424424 STRN3Q13033 797 aa20.56■□□□□ 0.88
PRNP-202ENST00000424424 AAK1Q2M2I8 961 aa20.56■□□□□ 0.88
PRNP-202ENST00000424424 ATF7IP2Q5U623 682 aa20.56■□□□□ 0.88
PRNP-202ENST00000424424 KCNG4Q8TDN1 519 aa20.56■□□□□ 0.88
PRNP-202ENST00000424424 MICAL1Q8TDZ2 1067 aa20.56■□□□□ 0.88
PRNP-202ENST00000424424 ATXN2LQ8WWM7 1075 aaKnown RBP20.56■□□□□ 0.88
PRNP-202ENST00000424424 MRPS27Q92552 414 aaKnown RBP20.56■□□□□ 0.88
PRNP-202ENST00000424424 HLA-CQ95604 372 aa20.56■□□□□ 0.88
PRNP-202ENST00000424424 REEP2Q9BRK0 252 aa20.56■□□□□ 0.88
PRNP-202ENST00000424424 MRPL4Q9BYD3 311 aaKnown RBP20.56■□□□□ 0.88
PRNP-202ENST00000424424 GBP3Q9H0R5 595 aa20.56■□□□□ 0.88
PRNP-202ENST00000424424 NXF3Q9H4D5 531 aaKnown RBP20.56■□□□□ 0.88
PRNP-202ENST00000424424 NRDE2Q9H7Z3 1164 aa20.56■□□□□ 0.88
PRNP-202ENST00000424424 PARP2Q9UGN5 583 aa20.56■□□□□ 0.88
PRNP-202ENST00000424424 LZTS1Q9Y250 596 aa20.56■□□□□ 0.88
PRNP-202ENST00000424424 CUTAO60888 179 aa20.55■□□□□ 0.88
PRNP-202ENST00000424424 POMCP01189 267 aa20.55■□□□□ 0.88
PRNP-202ENST00000424424 CACNB1Q02641 598 aaPredicted RBP20.55■□□□□ 0.88
PRNP-202ENST00000424424 DCAF4L1Q3SXM0 396 aa20.55■□□□□ 0.88
PRNP-202ENST00000424424 TCEAL5Q5H9L2 206 aa20.55■□□□□ 0.88
PRNP-202ENST00000424424 PDE12Q6L8Q7 609 aaKnown RBP20.55■□□□□ 0.88
PRNP-202ENST00000424424 SV2BQ7L1I2 683 aa20.55■□□□□ 0.88
PRNP-202ENST00000424424 LRRC15Q8TF66 581 aa20.55■□□□□ 0.88
PRNP-202ENST00000424424 TMEM169Q96HH4 297 aa20.55■□□□□ 0.88
PRNP-202ENST00000424424 GAD1Q99259 594 aa20.55■□□□□ 0.88
PRNP-202ENST00000424424 RNF39Q9H2S5 420 aa20.55■□□□□ 0.88
PRNP-202ENST00000424424 TLR9Q9NR96 1032 aa20.55■□□□□ 0.88
PRNP-202ENST00000424424 PRUNE2Q8WUY3 3088 aa20.55■□□□□ 0.88
PRNP-202ENST00000424424 SPTBN5Q9NRC6 3674 aaKnown RBP20.54■□□□□ 0.88
PRNP-202ENST00000424424 ARL5CA6NH57 179 aa20.54■□□□□ 0.88
PRNP-202ENST00000424424 TTLL13PA6NNM8 815 aa20.54■□□□□ 0.88
PRNP-202ENST00000424424 NCK2O43639 380 aa20.54■□□□□ 0.88
PRNP-202ENST00000424424 TBCAO75347 108 aaKnown RBP20.54■□□□□ 0.88
PRNP-202ENST00000424424 SCP2P22307 547 aa20.54■□□□□ 0.88
PRNP-202ENST00000424424 AKAP5P24588 427 aa20.54■□□□□ 0.88
PRNP-202ENST00000424424 DNAJB1P25685 340 aa20.54■□□□□ 0.88
PRNP-202ENST00000424424 PBX3P40426 434 aa20.54■□□□□ 0.88
PRNP-202ENST00000424424 MLH1P40692 756 aa20.54■□□□□ 0.88
PRNP-202ENST00000424424 STAT6P42226 847 aa20.54■□□□□ 0.88
PRNP-202ENST00000424424 MRPS5P82675 430 aaKnown RBP20.54■□□□□ 0.88
PRNP-202ENST00000424424 GIT2Q14161 759 aa20.54■□□□□ 0.88
PRNP-202ENST00000424424 NT5DC1Q5TFE4 455 aa20.54■□□□□ 0.88
PRNP-202ENST00000424424 SLC39A11Q8N1S5 342 aa20.54■□□□□ 0.88
PRNP-202ENST00000424424 MYCT1Q8N699 235 aa20.54■□□□□ 0.88
PRNP-202ENST00000424424 RPS6KC1Q96S38 1066 aa20.54■□□□□ 0.88
PRNP-202ENST00000424424 ZHX3Q9H4I2 956 aa20.54■□□□□ 0.88
PRNP-202ENST00000424424 PARVGQ9HBI0 331 aa20.54■□□□□ 0.88
PRNP-202ENST00000424424 TNFSF13BQ9Y275 285 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms