RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 EHMT1Q9H9B1 1298 aa16.37■□□□□ 0.21
C9orf3-204ENST00000424143 GOPCQ9HD26 462 aa16.37■□□□□ 0.21
C9orf3-204ENST00000424143 TAS2R14Q9NYV8 317 aa16.37■□□□□ 0.21
C9orf3-204ENST00000424143 RBBP6Q7Z6E9 1792 aaKnown RBP16.37■□□□□ 0.21
C9orf3-204ENST00000424143 COL2A1P02458 1487 aaPredicted RBP16.37■□□□□ 0.21
C9orf3-204ENST00000424143 SUN1O94901 812 aa16.36■□□□□ 0.21
C9orf3-204ENST00000424143 ZNF76P36508 570 aa16.36■□□□□ 0.21
C9orf3-204ENST00000424143 CCDC15Q0P6D6 951 aa16.36■□□□□ 0.21
C9orf3-204ENST00000424143 PPP1R7Q15435 360 aa16.36■□□□□ 0.21
C9orf3-204ENST00000424143 HIBCHQ6NVY1 386 aaPredicted RBP16.36■□□□□ 0.21
C9orf3-204ENST00000424143 TTC27Q6P3X3 843 aa16.36■□□□□ 0.21
C9orf3-204ENST00000424143 AMIGO3Q86WK7 504 aa16.36■□□□□ 0.21
C9orf3-204ENST00000424143 C18orf8Q96DM3 657 aa16.36■□□□□ 0.21
C9orf3-204ENST00000424143 IFT74Q96LB3 600 aa16.36■□□□□ 0.21
C9orf3-204ENST00000424143 FOXP3Q9BZS1 431 aa16.36■□□□□ 0.21
C9orf3-204ENST00000424143 DNAJC18Q9H819 358 aa16.36■□□□□ 0.21
C9orf3-204ENST00000424143 RGL1Q9NZL6 768 aa16.36■□□□□ 0.21
C9orf3-204ENST00000424143 LGALS13Q9UHV8 139 aa16.36■□□□□ 0.21
C9orf3-204ENST00000424143 GTF3C4Q9UKN8 822 aa16.36■□□□□ 0.21
C9orf3-204ENST00000424143 KDM4FA0A1W2PPD8 638 aa16.35■□□□□ 0.21
C9orf3-204ENST00000424143 F5H6K3 240 aa16.35■□□□□ 0.21
C9orf3-204ENST00000424143 C6orf229H3BNL8 230 aa16.35■□□□□ 0.21
C9orf3-204ENST00000424143 OPLAHO14841 1288 aa16.35■□□□□ 0.21
C9orf3-204ENST00000424143 NQO1P15559 274 aaKnown RBP16.35■□□□□ 0.21
C9orf3-204ENST00000424143 COMTP21964 271 aa16.35■□□□□ 0.21
C9orf3-204ENST00000424143 PDE6BP35913 854 aa16.35■□□□□ 0.21
C9orf3-204ENST00000424143 BNIP1Q12981 228 aa16.35■□□□□ 0.21
C9orf3-204ENST00000424143 ZNF211Q13398 564 aaPredicted RBP16.35■□□□□ 0.21
C9orf3-204ENST00000424143 PTPROQ16827 1216 aa16.35■□□□□ 0.21
C9orf3-204ENST00000424143 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.35■□□□□ 0.21
C9orf3-204ENST00000424143 MIGA2Q7L4E1 593 aa16.35■□□□□ 0.21
C9orf3-204ENST00000424143 SLC51AQ86UW1 340 aa16.35■□□□□ 0.21
C9orf3-204ENST00000424143 EXOC3L1Q86VI1 746 aa16.35■□□□□ 0.21
C9orf3-204ENST00000424143 ZDHHC14Q8IZN3 488 aa16.35■□□□□ 0.21
C9orf3-204ENST00000424143 SLC17A8Q8NDX2 589 aa16.35■□□□□ 0.21
C9orf3-204ENST00000424143 C7orf43Q8WVR3 580 aa16.35■□□□□ 0.21
C9orf3-204ENST00000424143 CKAP2Q8WWK9 683 aa16.35■□□□□ 0.21
C9orf3-204ENST00000424143 PRMT1Q99873 361 aaKnown RBP16.35■□□□□ 0.21
C9orf3-204ENST00000424143 ELAC2Q9BQ52 826 aaKnown RBP16.35■□□□□ 0.21
C9orf3-204ENST00000424143 TIPINQ9BVW5 301 aa16.35■□□□□ 0.21
C9orf3-204ENST00000424143 DEFB129Q9H1M3 183 aa16.35■□□□□ 0.21
C9orf3-204ENST00000424143 CEP83Q9Y592 693 aa16.35■□□□□ 0.21
C9orf3-204ENST00000424143 EXOC3O60645 756 aa16.34■□□□□ 0.21
C9orf3-204ENST00000424143 WFS1O76024 890 aa16.34■□□□□ 0.21
C9orf3-204ENST00000424143 ECEL1O95672 775 aa16.34■□□□□ 0.21
C9orf3-204ENST00000424143 SERPINB2P05120 415 aa16.34■□□□□ 0.21
C9orf3-204ENST00000424143 CCND1P24385 295 aa16.34■□□□□ 0.21
C9orf3-204ENST00000424143 RWDD2BP57060 319 aa16.34■□□□□ 0.21
C9orf3-204ENST00000424143 CYP4A11Q02928 519 aa16.34■□□□□ 0.21
C9orf3-204ENST00000424143 CALCOCO2Q13137 446 aa16.34■□□□□ 0.21
C9orf3-204ENST00000424143 ACVR2BQ13705 512 aa16.34■□□□□ 0.21
C9orf3-204ENST00000424143 ZC2HC1CQ53FD0 456 aaPredicted RBP16.34■□□□□ 0.21
C9orf3-204ENST00000424143 LRCH2Q5VUJ6 765 aa16.34■□□□□ 0.21
C9orf3-204ENST00000424143 LARGE2Q8N3Y3 721 aa16.34■□□□□ 0.21
C9orf3-204ENST00000424143 KRT35Q92764 455 aa16.34■□□□□ 0.21
C9orf3-204ENST00000424143 MIEF2Q96C03 454 aa16.34■□□□□ 0.21
C9orf3-204ENST00000424143 DYDC2Q96IM9 177 aa16.34■□□□□ 0.21
C9orf3-204ENST00000424143 TMOD4Q9NZQ9 345 aa16.34■□□□□ 0.21
C9orf3-204ENST00000424143 PRKAG3Q9UGI9 489 aa16.34■□□□□ 0.21
C9orf3-204ENST00000424143 NOCTQ9UK39 431 aaKnown RBP16.34■□□□□ 0.21
C9orf3-204ENST00000424143 ARL2BPQ9Y2Y0 163 aa16.34■□□□□ 0.21
C9orf3-204ENST00000424143 THSD7AQ9UPZ6 1657 aa16.34■□□□□ 0.21
C9orf3-204ENST00000424143 TLDC2A0PJX2 215 aa16.34■□□□□ 0.21
C9orf3-204ENST00000424143 UBAP1LF5GYI3 381 aa16.34■□□□□ 0.21
C9orf3-204ENST00000424143 VIMP08670 466 aaKnown RBP16.34■□□□□ 0.21
C9orf3-204ENST00000424143 PYGMP11217 842 aa16.34■□□□□ 0.21
C9orf3-204ENST00000424143 BMP3P12645 472 aa16.34■□□□□ 0.21
C9orf3-204ENST00000424143 CHRNB2P17787 502 aa16.34■□□□□ 0.21
C9orf3-204ENST00000424143 POLD1P28340 1107 aa16.34■□□□□ 0.21
C9orf3-204ENST00000424143 VAMP7P51809 220 aa16.34■□□□□ 0.21
C9orf3-204ENST00000424143 CCNG1P51959 295 aa16.34■□□□□ 0.21
C9orf3-204ENST00000424143 ICA1Q05084 483 aa16.34■□□□□ 0.21
C9orf3-204ENST00000424143 PTP4A2Q12974 167 aa16.34■□□□□ 0.21
C9orf3-204ENST00000424143 FAM98CQ17RN3 349 aaKnown RBP16.34■□□□□ 0.21
C9orf3-204ENST00000424143 RNF43Q68DV7 783 aa16.34■□□□□ 0.21
C9orf3-204ENST00000424143 CEP57Q86XR8 500 aa16.34■□□□□ 0.21
C9orf3-204ENST00000424143 PALB2Q86YC2 1186 aa16.34■□□□□ 0.21
C9orf3-204ENST00000424143 RPUSD2Q8IZ73 545 aaKnown RBP16.34■□□□□ 0.21
C9orf3-204ENST00000424143 RIBC1Q8N443 379 aaPredicted RBP16.34■□□□□ 0.21
C9orf3-204ENST00000424143 BBOF1Q8ND07 529 aa16.34■□□□□ 0.21
C9orf3-204ENST00000424143 GRK7Q8WTQ7 553 aa16.34■□□□□ 0.21
C9orf3-204ENST00000424143 N4BP2L2Q92802 583 aaPredicted RBP16.34■□□□□ 0.21
C9orf3-204ENST00000424143 FAM81BQ96LP2 452 aa16.34■□□□□ 0.21
C9orf3-204ENST00000424143 IWS1Q96ST2 819 aa16.34■□□□□ 0.21
C9orf3-204ENST00000424143 UBE2TQ9NPD8 197 aaPredicted RBP16.34■□□□□ 0.21
C9orf3-204ENST00000424143 MYH11P35749 1972 aa16.33■□□□□ 0.2
C9orf3-204ENST00000424143 BACH1O14867 736 aa16.33■□□□□ 0.2
C9orf3-204ENST00000424143 NDUFB10O96000 172 aa16.33■□□□□ 0.2
C9orf3-204ENST00000424143 RARAP10276 462 aa16.33■□□□□ 0.2
C9orf3-204ENST00000424143 CYP2J2P51589 502 aa16.33■□□□□ 0.2
C9orf3-204ENST00000424143 SLC18A1P54219 525 aa16.33■□□□□ 0.2
C9orf3-204ENST00000424143 NCALDP61601 193 aa16.33■□□□□ 0.2
C9orf3-204ENST00000424143 PTK6Q13882 451 aa16.33■□□□□ 0.2
C9orf3-204ENST00000424143 ARHGAP44Q17R89 818 aa16.33■□□□□ 0.2
C9orf3-204ENST00000424143 ODR4Q5SWX8 454 aa16.33■□□□□ 0.2
C9orf3-204ENST00000424143 TPH2Q8IWU9 490 aa16.33■□□□□ 0.2
C9orf3-204ENST00000424143 CCDC105Q8IYK2 499 aa16.33■□□□□ 0.2
C9orf3-204ENST00000424143 PSPC1Q8WXF1 523 aaKnown RBP16.33■□□□□ 0.2
C9orf3-204ENST00000424143 RSRC1Q96IZ7 334 aaKnown RBP16.33■□□□□ 0.2
C9orf3-204ENST00000424143 L3MBTL3Q96JM7 780 aaPredicted RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms