RNA–Protein interactions for RNA: ENST00000422797.5

LIMS1-207, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene LIMS1, Length 1,544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-207ENST00000422797 SHBGP04278 402 aa11.84□□□□□ -0.51
LIMS1-207ENST00000422797 CYP1A2P05177 515 aa11.84□□□□□ -0.51
LIMS1-207ENST00000422797 FAM86B2P0C5J1 330 aa11.84□□□□□ -0.51
LIMS1-207ENST00000422797 EEF2P13639 858 aaKnown RBP11.84□□□□□ -0.51
LIMS1-207ENST00000422797 ALADP13716 330 aa11.84□□□□□ -0.51
LIMS1-207ENST00000422797 PEX5P50542 639 aa11.84□□□□□ -0.51
LIMS1-207ENST00000422797 RWDD2BP57060 319 aa11.84□□□□□ -0.51
LIMS1-207ENST00000422797 ICA1Q05084 483 aa11.84□□□□□ -0.51
LIMS1-207ENST00000422797 CCDC15Q0P6D6 951 aa11.84□□□□□ -0.51
LIMS1-207ENST00000422797 AUHQ13825 339 aaKnown RBP11.84□□□□□ -0.51
LIMS1-207ENST00000422797 CERKLQ49MI3 558 aaPredicted RBP11.84□□□□□ -0.51
LIMS1-207ENST00000422797 LRCH2Q5VUJ6 765 aa11.84□□□□□ -0.51
LIMS1-207ENST00000422797 HIBCHQ6NVY1 386 aaPredicted RBP11.84□□□□□ -0.51
LIMS1-207ENST00000422797 CCDC105Q8IYK2 499 aa11.84□□□□□ -0.51
LIMS1-207ENST00000422797 RIBC1Q8N443 379 aaPredicted RBP11.84□□□□□ -0.51
LIMS1-207ENST00000422797 MDM1Q8TC05 714 aa11.84□□□□□ -0.51
LIMS1-207ENST00000422797 DYDC1Q8WWB3 177 aa11.84□□□□□ -0.51
LIMS1-207ENST00000422797 CD101Q93033 1021 aa11.84□□□□□ -0.51
LIMS1-207ENST00000422797 GPR101Q96P66 508 aaPredicted RBP11.84□□□□□ -0.51
LIMS1-207ENST00000422797 STRA6Q9BX79 667 aa11.84□□□□□ -0.51
LIMS1-207ENST00000422797 TRIM7Q9C029 511 aa11.84□□□□□ -0.51
LIMS1-207ENST00000422797 EBF2Q9HAK2 575 aa11.84□□□□□ -0.51
LIMS1-207ENST00000422797 ERVK-5Q9HDB9 667 aa11.84□□□□□ -0.51
LIMS1-207ENST00000422797 PI4KBQ9UBF8 816 aa11.84□□□□□ -0.51
LIMS1-207ENST00000422797 GTF3C4Q9UKN8 822 aa11.84□□□□□ -0.51
LIMS1-207ENST00000422797 ARL2BPQ9Y2Y0 163 aa11.84□□□□□ -0.51
LIMS1-207ENST00000422797 CEP83Q9Y592 693 aa11.84□□□□□ -0.51
LIMS1-207ENST00000422797 PCDHA3Q9Y5H8 950 aa11.84□□□□□ -0.51
LIMS1-207ENST00000422797 COL2A1P02458 1487 aaPredicted RBP11.84□□□□□ -0.51
LIMS1-207ENST00000422797 TLDC2A0PJX2 215 aa11.83□□□□□ -0.52
LIMS1-207ENST00000422797 PSMD10O75832 226 aa11.83□□□□□ -0.52
LIMS1-207ENST00000422797 ATP5HO75947 161 aa11.83□□□□□ -0.52
LIMS1-207ENST00000422797 WFS1O76024 890 aa11.83□□□□□ -0.52
LIMS1-207ENST00000422797 CCND1P24385 295 aa11.83□□□□□ -0.52
LIMS1-207ENST00000422797 CYP2J2P51589 502 aa11.83□□□□□ -0.52
LIMS1-207ENST00000422797 CYP4A11Q02928 519 aa11.83□□□□□ -0.52
LIMS1-207ENST00000422797 NR1H3Q13133 447 aa11.83□□□□□ -0.52
LIMS1-207ENST00000422797 CBWD6Q4V339 395 aa11.83□□□□□ -0.52
LIMS1-207ENST00000422797 CBWD3Q5JTY5 395 aa11.83□□□□□ -0.52
LIMS1-207ENST00000422797 CBWD5Q5RIA9 395 aa11.83□□□□□ -0.52
LIMS1-207ENST00000422797 ODR4Q5SWX8 454 aa11.83□□□□□ -0.52
LIMS1-207ENST00000422797 CDC42EP5Q6NZY7 148 aa11.83□□□□□ -0.52
LIMS1-207ENST00000422797 TATDN1Q6P1N9 297 aa11.83□□□□□ -0.52
LIMS1-207ENST00000422797 PPP1R21Q6ZMI0 780 aa11.83□□□□□ -0.52
LIMS1-207ENST00000422797 MIGA2Q7L4E1 593 aa11.83□□□□□ -0.52
LIMS1-207ENST00000422797 OTOP1Q7RTM1 612 aa11.83□□□□□ -0.52
LIMS1-207ENST00000422797 CLEC10AQ8IUN9 316 aa11.83□□□□□ -0.52
LIMS1-207ENST00000422797 SYCP3Q8IZU3 236 aa11.83□□□□□ -0.52
LIMS1-207ENST00000422797 GLG1Q92896 1179 aa11.83□□□□□ -0.52
LIMS1-207ENST00000422797 C18orf8Q96DM3 657 aa11.83□□□□□ -0.52
LIMS1-207ENST00000422797 TRIM11Q96F44 468 aa11.83□□□□□ -0.52
LIMS1-207ENST00000422797 ZDHHC15Q96MV8 337 aa11.83□□□□□ -0.52
LIMS1-207ENST00000422797 ACCSQ96QU6 501 aa11.83□□□□□ -0.52
LIMS1-207ENST00000422797 CCDC77Q9BR77 488 aa11.83□□□□□ -0.52
LIMS1-207ENST00000422797 IDI2Q9BXS1 227 aa11.83□□□□□ -0.52
LIMS1-207ENST00000422797 NOP53Q9NZM5 478 aaKnown RBP11.83□□□□□ -0.52
LIMS1-207ENST00000422797 COG5Q9UP83 839 aa11.83□□□□□ -0.52
LIMS1-207ENST00000422797 IGLV3-22A0A075B6J6 115 aa11.82□□□□□ -0.52
LIMS1-207ENST00000422797 ARHGEF35A5YM69 484 aa11.82□□□□□ -0.52
LIMS1-207ENST00000422797 PPEF1O14829 653 aaPredicted RBP11.82□□□□□ -0.52
LIMS1-207ENST00000422797 SPOPO43791 374 aa11.82□□□□□ -0.52
LIMS1-207ENST00000422797 GAS7O60861 476 aa11.82□□□□□ -0.52
LIMS1-207ENST00000422797 SLITRK3O94933 977 aa11.82□□□□□ -0.52
LIMS1-207ENST00000422797 GJB6O95452 261 aa11.82□□□□□ -0.52
LIMS1-207ENST00000422797 GAS8O95995 478 aa11.82□□□□□ -0.52
LIMS1-207ENST00000422797 BMP3P12645 472 aa11.82□□□□□ -0.52
LIMS1-207ENST00000422797 NQO1P15559 274 aaKnown RBP11.82□□□□□ -0.52
LIMS1-207ENST00000422797 NMT1P30419 496 aaKnown RBP11.82□□□□□ -0.52
LIMS1-207ENST00000422797 GBP2P32456 591 aaPredicted RBP11.82□□□□□ -0.52
LIMS1-207ENST00000422797 MFAP3P55082 362 aa11.82□□□□□ -0.52
LIMS1-207ENST00000422797 PTPROQ16827 1216 aa11.82□□□□□ -0.52
LIMS1-207ENST00000422797 ZNF568Q3ZCX4 644 aa11.82□□□□□ -0.52
LIMS1-207ENST00000422797 GALNTL6Q49A17 601 aa11.82□□□□□ -0.52
LIMS1-207ENST00000422797 EPC2Q52LR7 807 aa11.82□□□□□ -0.52
LIMS1-207ENST00000422797 PPP1R2P3Q6NXS1 205 aa11.82□□□□□ -0.52
LIMS1-207ENST00000422797 TLDC1Q6P9B6 456 aa11.82□□□□□ -0.52
LIMS1-207ENST00000422797 ARHGEF18Q6ZSZ5 1173 aa11.82□□□□□ -0.52
LIMS1-207ENST00000422797 USP37Q86T82 979 aa11.82□□□□□ -0.52
LIMS1-207ENST00000422797 FAM228AQ86W67 206 aa11.82□□□□□ -0.52
LIMS1-207ENST00000422797 MAB21L3Q8N8X9 362 aa11.82□□□□□ -0.52
LIMS1-207ENST00000422797 LMO3Q8TAP4 145 aa11.82□□□□□ -0.52
LIMS1-207ENST00000422797 KIFAP3Q92845 792 aa11.82□□□□□ -0.52
LIMS1-207ENST00000422797 SNF8Q96H20 258 aa11.82□□□□□ -0.52
LIMS1-207ENST00000422797 RAB3IPQ96QF0 476 aaPredicted RBP11.82□□□□□ -0.52
LIMS1-207ENST00000422797 FIZ1Q96SL8 496 aa11.82□□□□□ -0.52
LIMS1-207ENST00000422797 PRMT1Q99873 361 aaKnown RBP11.82□□□□□ -0.52
LIMS1-207ENST00000422797 ELAC2Q9BQ52 826 aaKnown RBP11.82□□□□□ -0.52
LIMS1-207ENST00000422797 SEMA4AQ9H3S1 761 aa11.82□□□□□ -0.52
LIMS1-207ENST00000422797 ST6GALNAC4Q9H4F1 302 aa11.82□□□□□ -0.52
LIMS1-207ENST00000422797 PPCSQ9HAB8 311 aa11.82□□□□□ -0.52
LIMS1-207ENST00000422797 LARSQ9P2J5 1176 aaKnown RBP11.82□□□□□ -0.52
LIMS1-207ENST00000422797 LGALS13Q9UHV8 139 aa11.82□□□□□ -0.52
LIMS1-207ENST00000422797 NR2E1Q9Y466 385 aa11.82□□□□□ -0.52
LIMS1-207ENST00000422797 C19orf67A6NJJ6 358 aa11.81□□□□□ -0.52
LIMS1-207ENST00000422797 F5H6K3 240 aa11.81□□□□□ -0.52
LIMS1-207ENST00000422797 FOXN3O00409 490 aaPredicted RBP11.81□□□□□ -0.52
LIMS1-207ENST00000422797 FSCN2O14926 492 aa11.81□□□□□ -0.52
LIMS1-207ENST00000422797 MYBL1P10243 752 aa11.81□□□□□ -0.52
LIMS1-207ENST00000422797 COMTP21964 271 aa11.81□□□□□ -0.52
LIMS1-207ENST00000422797 RXRBP28702 533 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms