RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 DHX36Q9H2U1 1008 aaKnown RBP5.62□□□□□ -1.51
CDC42EP3-202ENST00000422687 AS3MTQ9HBK9 375 aa5.62□□□□□ -1.51
CDC42EP3-202ENST00000422687 PRDM5Q9NQX1 630 aaPredicted RBP5.62□□□□□ -1.51
CDC42EP3-202ENST00000422687 PCMTD2Q9NV79 361 aa5.62□□□□□ -1.51
CDC42EP3-202ENST00000422687 HMG20BQ9P0W2 317 aa5.62□□□□□ -1.51
CDC42EP3-202ENST00000422687 PI4KBQ9UBF8 816 aa5.62□□□□□ -1.51
CDC42EP3-202ENST00000422687 ABCF2Q9UG63 623 aa5.62□□□□□ -1.51
CDC42EP3-202ENST00000422687 KCNH3Q9ULD8 1083 aa5.62□□□□□ -1.51
CDC42EP3-202ENST00000422687 TPX2Q9ULW0 747 aaKnown RBP5.62□□□□□ -1.51
CDC42EP3-202ENST00000422687 PA2G4Q9UQ80 394 aaKnown RBP5.62□□□□□ -1.51
CDC42EP3-202ENST00000422687 GPR55Q9Y2T6 319 aaPredicted RBP5.62□□□□□ -1.51
CDC42EP3-202ENST00000422687 MYH2Q9UKX2 1941 aa5.62□□□□□ -1.51
CDC42EP3-202ENST00000422687 MYH13Q9UKX3 1938 aa5.62□□□□□ -1.51
CDC42EP3-202ENST00000422687 A0A1B0GUL7 405 aa5.61□□□□□ -1.51
CDC42EP3-202ENST00000422687 TRANK1O15050 2925 aa5.61□□□□□ -1.51
CDC42EP3-202ENST00000422687 MSCO60682 206 aa5.61□□□□□ -1.51
CDC42EP3-202ENST00000422687 CNMDO75829 334 aa5.61□□□□□ -1.51
CDC42EP3-202ENST00000422687 MED26O95402 600 aa5.61□□□□□ -1.51
CDC42EP3-202ENST00000422687 GSNP06396 782 aa5.61□□□□□ -1.51
CDC42EP3-202ENST00000422687 UBTFL1P0CB47 393 aaPredicted RBP5.61□□□□□ -1.51
CDC42EP3-202ENST00000422687 SSTR4P31391 388 aa5.61□□□□□ -1.51
CDC42EP3-202ENST00000422687 IGFALSP35858 605 aa5.61□□□□□ -1.51
CDC42EP3-202ENST00000422687 SNX17Q15036 470 aa5.61□□□□□ -1.51
CDC42EP3-202ENST00000422687 PCBP1Q15365 356 aaKnown RBP eCLIP5.61□□□□□ -1.51
CDC42EP3-202ENST00000422687 SEPT7Q16181 437 aaKnown RBP5.61□□□□□ -1.51
CDC42EP3-202ENST00000422687 PRSS53Q2L4Q9 553 aa5.61□□□□□ -1.51
CDC42EP3-202ENST00000422687 ODR4Q5SWX8 454 aa5.61□□□□□ -1.51
CDC42EP3-202ENST00000422687 AK9Q5TCS8 1911 aa5.61□□□□□ -1.51
CDC42EP3-202ENST00000422687 PKN3Q6P5Z2 889 aa5.61□□□□□ -1.51
CDC42EP3-202ENST00000422687 PAOXQ6QHF9 649 aa5.61□□□□□ -1.51
CDC42EP3-202ENST00000422687 NOL8Q76FK4 1167 aaKnown RBP5.61□□□□□ -1.51
CDC42EP3-202ENST00000422687 FOXP4Q8IVH2 680 aaPredicted RBP5.61□□□□□ -1.51
CDC42EP3-202ENST00000422687 DAGLBQ8NCG7 672 aa5.61□□□□□ -1.51
CDC42EP3-202ENST00000422687 GIMAP7Q8NHV1 300 aa5.61□□□□□ -1.51
CDC42EP3-202ENST00000422687 ENOX1Q8TC92 643 aaKnown RBP5.61□□□□□ -1.51
CDC42EP3-202ENST00000422687 DCAF4Q8WV16 495 aa5.61□□□□□ -1.51
CDC42EP3-202ENST00000422687 LPAR1Q92633 364 aa5.61□□□□□ -1.51
CDC42EP3-202ENST00000422687 HEXIM2Q96MH2 286 aaKnown RBP5.61□□□□□ -1.51
CDC42EP3-202ENST00000422687 CDX2Q99626 313 aaPredicted RBP5.61□□□□□ -1.51
CDC42EP3-202ENST00000422687 DSCC1Q9BVC3 393 aa5.61□□□□□ -1.51
CDC42EP3-202ENST00000422687 GOLGA2P5Q9HBQ8 144 aa5.61□□□□□ -1.51
CDC42EP3-202ENST00000422687 TMOD4Q9NZQ9 345 aa5.61□□□□□ -1.51
CDC42EP3-202ENST00000422687 FLRT1Q9NZU1 646 aa5.61□□□□□ -1.51
CDC42EP3-202ENST00000422687 HDAC5Q9UQL6 1122 aa5.61□□□□□ -1.51
CDC42EP3-202ENST00000422687 RABGAP1Q9Y3P9 1069 aa5.61□□□□□ -1.51
CDC42EP3-202ENST00000422687 NPFFR2Q9Y5X5 522 aa5.61□□□□□ -1.51
CDC42EP3-202ENST00000422687 ST14Q9Y5Y6 855 aa5.61□□□□□ -1.51
CDC42EP3-202ENST00000422687 REV3LO60673 3130 aa5.6□□□□□ -1.51
CDC42EP3-202ENST00000422687 TMEM265A0A087WTH1 108 aa5.6□□□□□ -1.51
CDC42EP3-202ENST00000422687 SHISA3A0PJX4 238 aa5.6□□□□□ -1.51
CDC42EP3-202ENST00000422687 SLC15A5A6NIM6 579 aa5.6□□□□□ -1.51
CDC42EP3-202ENST00000422687 DNM1LO00429 736 aa5.6□□□□□ -1.51
CDC42EP3-202ENST00000422687 AURKAO14965 403 aa5.6□□□□□ -1.51
CDC42EP3-202ENST00000422687 OPA1O60313 960 aa5.6□□□□□ -1.51
CDC42EP3-202ENST00000422687 RASGRP1O95267 797 aa5.6□□□□□ -1.51
CDC42EP3-202ENST00000422687 F13BP05160 661 aa5.6□□□□□ -1.51
CDC42EP3-202ENST00000422687 FAM87AP0C7U9 286 aa5.6□□□□□ -1.51
CDC42EP3-202ENST00000422687 ECI1P42126 302 aa5.6□□□□□ -1.51
CDC42EP3-202ENST00000422687 KCNJ6P48051 423 aa5.6□□□□□ -1.51
CDC42EP3-202ENST00000422687 SMAD3P84022 425 aaKnown RBP5.6□□□□□ -1.51
CDC42EP3-202ENST00000422687 POU4F1Q01851 419 aa5.6□□□□□ -1.51
CDC42EP3-202ENST00000422687 SLFN5Q08AF3 891 aa5.6□□□□□ -1.51
CDC42EP3-202ENST00000422687 SCRN1Q12765 414 aa5.6□□□□□ -1.51
CDC42EP3-202ENST00000422687 TFCP2Q12800 502 aa5.6□□□□□ -1.51
CDC42EP3-202ENST00000422687 GRB14Q14449 540 aa5.6□□□□□ -1.51
CDC42EP3-202ENST00000422687 SHHQ15465 462 aa5.6□□□□□ -1.51
CDC42EP3-202ENST00000422687 SHROOM1Q2M3G4 852 aaPredicted RBP5.6□□□□□ -1.51
CDC42EP3-202ENST00000422687 RSPO2Q6UXX9 243 aaPredicted RBP5.6□□□□□ -1.51
CDC42EP3-202ENST00000422687 DTX1Q86Y01 620 aa5.6□□□□□ -1.51
CDC42EP3-202ENST00000422687 TEX11Q8IYF3 940 aa5.6□□□□□ -1.51
CDC42EP3-202ENST00000422687 TRMT2AQ8IZ69 625 aaKnown RBP5.6□□□□□ -1.51
CDC42EP3-202ENST00000422687 SPATA5Q8NB90 893 aa5.6□□□□□ -1.51
CDC42EP3-202ENST00000422687 TRPV1Q8NER1 839 aa5.6□□□□□ -1.51
CDC42EP3-202ENST00000422687 MAFAQ8NHW3 353 aaPredicted RBP5.6□□□□□ -1.51
CDC42EP3-202ENST00000422687 SH3RF3Q8TEJ3 882 aaPredicted RBP5.6□□□□□ -1.51
CDC42EP3-202ENST00000422687 FRS2Q8WU20 508 aa5.6□□□□□ -1.51
CDC42EP3-202ENST00000422687 LEO1Q8WVC0 666 aaPredicted RBP5.6□□□□□ -1.51
CDC42EP3-202ENST00000422687 EDC3Q96F86 508 aaKnown RBP5.6□□□□□ -1.51
CDC42EP3-202ENST00000422687 MAGEB10Q96LZ2 347 aaPredicted RBP5.6□□□□□ -1.51
CDC42EP3-202ENST00000422687 MFSD14AQ96MC6 490 aa5.6□□□□□ -1.51
CDC42EP3-202ENST00000422687 CEP89Q96ST8 783 aa5.6□□□□□ -1.51
CDC42EP3-202ENST00000422687 ZFYVE21Q9BQ24 234 aa5.6□□□□□ -1.51
CDC42EP3-202ENST00000422687 LBHD1Q9BQE6 289 aaPredicted RBP5.6□□□□□ -1.51
CDC42EP3-202ENST00000422687 GPR62Q9BZJ7 368 aa5.6□□□□□ -1.51
CDC42EP3-202ENST00000422687 SENP6Q9GZR1 1112 aaPredicted RBP5.6□□□□□ -1.51
CDC42EP3-202ENST00000422687 TTYH1Q9H313 450 aaPredicted RBP5.6□□□□□ -1.51
CDC42EP3-202ENST00000422687 DDX20Q9UHI6 824 aaKnown RBP5.6□□□□□ -1.51
CDC42EP3-202ENST00000422687 ZBTB21Q9ULJ3 1066 aa5.6□□□□□ -1.51
CDC42EP3-202ENST00000422687 G3BP2Q9UN86 482 aaKnown RBP5.6□□□□□ -1.51
CDC42EP3-202ENST00000422687 CAPN6Q9Y6Q1 641 aa5.6□□□□□ -1.51
CDC42EP3-202ENST00000422687 SIPA1L1O43166 1804 aa5.6□□□□□ -1.51
CDC42EP3-202ENST00000422687 MAST2Q6P0Q8 1798 aa5.6□□□□□ -1.51
CDC42EP3-202ENST00000422687 FLT1P17948 1338 aa5.59□□□□□ -1.51
CDC42EP3-202ENST00000422687 PRR33A8MZF0 331 aa5.59□□□□□ -1.51
CDC42EP3-202ENST00000422687 WDR64B1ANS9 1081 aa5.59□□□□□ -1.51
CDC42EP3-202ENST00000422687 B4E1Z4 1266 aa5.59□□□□□ -1.51
CDC42EP3-202ENST00000422687 ARNTLO00327 626 aa5.59□□□□□ -1.51
CDC42EP3-202ENST00000422687 AQP7O14520 342 aa5.59□□□□□ -1.51
CDC42EP3-202ENST00000422687 GLRX3O76003 335 aaKnown RBP5.59□□□□□ -1.51
CDC42EP3-202ENST00000422687 CRTAMO95727 393 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms