RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 NEK9Q8TD19 979 aa17.02■□□□□ 0.31
CDH1-202ENST00000422392 EPS8L1Q8TE68 723 aa17.02■□□□□ 0.31
CDH1-202ENST00000422392 SELENOSQ9BQE4 189 aa17.02■□□□□ 0.31
CDH1-202ENST00000422392 PABPC3Q9H361 631 aaKnown RBP17.02■□□□□ 0.31
CDH1-202ENST00000422392 LARSQ9P2J5 1176 aaKnown RBP17.02■□□□□ 0.31
CDH1-202ENST00000422392 NFIBO00712 420 aa17.01■□□□□ 0.31
CDH1-202ENST00000422392 SLC16A4O15374 487 aa17.01■□□□□ 0.31
CDH1-202ENST00000422392 ADRB2P07550 413 aa17.01■□□□□ 0.31
CDH1-202ENST00000422392 MMEP08473 750 aa17.01■□□□□ 0.31
CDH1-202ENST00000422392 IFI35P80217 286 aaPredicted RBP17.01■□□□□ 0.31
CDH1-202ENST00000422392 ACTN3Q08043 901 aaPredicted RBP17.01■□□□□ 0.31
CDH1-202ENST00000422392 SPP2Q13103 211 aa17.01■□□□□ 0.31
CDH1-202ENST00000422392 DHX34Q14147 1143 aaKnown RBP17.01■□□□□ 0.31
CDH1-202ENST00000422392 DENND2CQ68D51 928 aa17.01■□□□□ 0.31
CDH1-202ENST00000422392 UBL4BQ8N7F7 174 aa17.01■□□□□ 0.31
CDH1-202ENST00000422392 FAM84AQ96KN4 292 aa17.01■□□□□ 0.31
CDH1-202ENST00000422392 KREMEN1Q96MU8 473 aa17.01■□□□□ 0.31
CDH1-202ENST00000422392 POP1Q99575 1024 aaKnown RBP17.01■□□□□ 0.31
CDH1-202ENST00000422392 TMEM117Q9H0C3 514 aa17.01■□□□□ 0.31
CDH1-202ENST00000422392 AZI2Q9H6S1 392 aa17.01■□□□□ 0.31
CDH1-202ENST00000422392 VCPKMTQ9H867 229 aa17.01■□□□□ 0.31
CDH1-202ENST00000422392 DNM1LO00429 736 aa17.01■□□□□ 0.31
CDH1-202ENST00000422392 CHN1P15882 459 aa17.01■□□□□ 0.31
CDH1-202ENST00000422392 PEX5P50542 639 aa17.01■□□□□ 0.31
CDH1-202ENST00000422392 SETQ01105 290 aaPredicted RBP17.01■□□□□ 0.31
CDH1-202ENST00000422392 CCDC121Q6ZUS5 278 aa17.01■□□□□ 0.31
CDH1-202ENST00000422392 CPLX4Q7Z7G2 160 aa17.01■□□□□ 0.31
CDH1-202ENST00000422392 CHURC1Q8WUH1 139 aa17.01■□□□□ 0.31
CDH1-202ENST00000422392 CCDC127Q96BQ5 260 aa17.01■□□□□ 0.31
CDH1-202ENST00000422392 KIFC3Q9BVG8 833 aa17.01■□□□□ 0.31
CDH1-202ENST00000422392 TRPC6Q9Y210 931 aa17.01■□□□□ 0.31
CDH1-202ENST00000422392 FAM187AA6NFU0 413 aa17■□□□□ 0.31
CDH1-202ENST00000422392 SRRM3A6NNA2 597 aaPredicted RBP17■□□□□ 0.31
CDH1-202ENST00000422392 CTNND1O60716 968 aaKnown RBP17■□□□□ 0.31
CDH1-202ENST00000422392 RARRES1P49788 294 aa17■□□□□ 0.31
CDH1-202ENST00000422392 MXI1P50539 228 aa17■□□□□ 0.31
CDH1-202ENST00000422392 PEX3P56589 373 aa17■□□□□ 0.31
CDH1-202ENST00000422392 CETN1Q12798 172 aa17■□□□□ 0.31
CDH1-202ENST00000422392 KRT27Q7Z3Y8 459 aa17■□□□□ 0.31
CDH1-202ENST00000422392 XXYLT1Q8NBI6 393 aa17■□□□□ 0.31
CDH1-202ENST00000422392 EPS8L3Q8TE67 593 aaKnown RBP17■□□□□ 0.31
CDH1-202ENST00000422392 SEMA4DQ92854 862 aa17■□□□□ 0.31
CDH1-202ENST00000422392 TATDN2Q93075 761 aa17■□□□□ 0.31
CDH1-202ENST00000422392 SAAL1Q96ER3 474 aa17■□□□□ 0.31
CDH1-202ENST00000422392 QTRT2Q9H974 415 aaKnown RBP17■□□□□ 0.31
CDH1-202ENST00000422392 EHMT1Q9H9B1 1298 aa17■□□□□ 0.31
CDH1-202ENST00000422392 VEZTQ9HBM0 779 aa17■□□□□ 0.31
CDH1-202ENST00000422392 HOMER2Q9NSB8 354 aa17■□□□□ 0.31
CDH1-202ENST00000422392 HERC5Q9UII4 1024 aaKnown RBP17■□□□□ 0.31
CDH1-202ENST00000422392 GOLGA6L7A0A1B0GV03 622 aa17■□□□□ 0.31
CDH1-202ENST00000422392 PAEPP09466 180 aa17■□□□□ 0.31
CDH1-202ENST00000422392 UGCGQ16739 394 aa17■□□□□ 0.31
CDH1-202ENST00000422392 C11orf63Q6NUN7 778 aa17■□□□□ 0.31
CDH1-202ENST00000422392 HAUS6Q7Z4H7 955 aa17■□□□□ 0.31
CDH1-202ENST00000422392 CBWD2Q8IUF1 395 aa17■□□□□ 0.31
CDH1-202ENST00000422392 NUP85Q9BW27 656 aa17■□□□□ 0.31
CDH1-202ENST00000422392 RASAL2Q9UJF2 1139 aa17■□□□□ 0.31
CDH1-202ENST00000422392 NOCTQ9UK39 431 aaKnown RBP17■□□□□ 0.31
CDH1-202ENST00000422392 H0YIN7 160 aa16.99■□□□□ 0.31
CDH1-202ENST00000422392 DHX15O43143 795 aaKnown RBP16.99■□□□□ 0.31
CDH1-202ENST00000422392 SPOPO43791 374 aa16.99■□□□□ 0.31
CDH1-202ENST00000422392 RTN2O75298 545 aa16.99■□□□□ 0.31
CDH1-202ENST00000422392 MUTP22033 750 aa16.99■□□□□ 0.31
CDH1-202ENST00000422392 EIF3BP55884 814 aaKnown RBP16.99■□□□□ 0.31
CDH1-202ENST00000422392 DGKZQ13574 1117 aa16.99■□□□□ 0.31
CDH1-202ENST00000422392 SEL1L2Q5TEA6 688 aa16.99■□□□□ 0.31
CDH1-202ENST00000422392 CCDC25Q86WR0 208 aa16.99■□□□□ 0.31
CDH1-202ENST00000422392 CCDC105Q8IYK2 499 aa16.99■□□□□ 0.31
CDH1-202ENST00000422392 ACCSQ96QU6 501 aa16.99■□□□□ 0.31
CDH1-202ENST00000422392 TMEM39BQ9GZU3 492 aa16.99■□□□□ 0.31
CDH1-202ENST00000422392 MTFR1LQ9H019 292 aa16.99■□□□□ 0.31
CDH1-202ENST00000422392 ADAM7Q9H2U9 754 aa16.99■□□□□ 0.31
CDH1-202ENST00000422392 TOPORSQ9NS56 1045 aaPredicted RBP16.99■□□□□ 0.31
CDH1-202ENST00000422392 P4HBP07237 508 aaKnown RBP16.99■□□□□ 0.31
CDH1-202ENST00000422392 NUDT17P0C025 328 aa16.99■□□□□ 0.31
CDH1-202ENST00000422392 RFX1P22670 979 aa16.99■□□□□ 0.31
CDH1-202ENST00000422392 CTNNA2P26232 953 aa16.99■□□□□ 0.31
CDH1-202ENST00000422392 CHRNA3P32297 505 aa16.99■□□□□ 0.31
CDH1-202ENST00000422392 CCDC38Q502W7 563 aa16.99■□□□□ 0.31
CDH1-202ENST00000422392 HOOK3Q86VS8 718 aa16.99■□□□□ 0.31
CDH1-202ENST00000422392 CACNA2D3Q8IZS8 1091 aa16.99■□□□□ 0.31
CDH1-202ENST00000422392 CPXCR1Q8N123 301 aa16.99■□□□□ 0.31
CDH1-202ENST00000422392 ZNF564Q8TBZ8 553 aaPredicted RBP16.99■□□□□ 0.31
CDH1-202ENST00000422392 XPO6Q96QU8 1125 aaKnown RBP16.99■□□□□ 0.31
CDH1-202ENST00000422392 TMEM206Q9H813 350 aa16.99■□□□□ 0.31
CDH1-202ENST00000422392 CCPG1Q9ULG6 757 aa16.99■□□□□ 0.31
CDH1-202ENST00000422392 PCDHA3Q9Y5H8 950 aa16.99■□□□□ 0.31
CDH1-202ENST00000422392 MIF4GDA9UHW6 222 aaKnown RBP16.98■□□□□ 0.31
CDH1-202ENST00000422392 PLS3P13797 630 aa16.98■□□□□ 0.31
CDH1-202ENST00000422392 DRD4P21917 467 aa16.98■□□□□ 0.31
CDH1-202ENST00000422392 HADHBP55084 474 aaKnown RBP16.98■□□□□ 0.31
CDH1-202ENST00000422392 FMO1Q01740 532 aa16.98■□□□□ 0.31
CDH1-202ENST00000422392 PPP2R5EQ16537 467 aa16.98■□□□□ 0.31
CDH1-202ENST00000422392 ERMARDQ5T6L9 678 aa16.98■□□□□ 0.31
CDH1-202ENST00000422392 PLA2G4FQ68DD2 849 aa16.98■□□□□ 0.31
CDH1-202ENST00000422392 FMNL3Q8IVF7 1028 aa16.98■□□□□ 0.31
CDH1-202ENST00000422392 DHX38Q92620 1227 aaKnown RBP16.98■□□□□ 0.31
CDH1-202ENST00000422392 RIT2Q99578 217 aa16.98■□□□□ 0.31
CDH1-202ENST00000422392 TMOD2Q9NZR1 351 aa16.98■□□□□ 0.31
CDH1-202ENST00000422392 SPDYE2BA6NHP3 402 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms