RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 PRIMPOLQ96LW4 560 aa10.47□□□□□ -0.73
CMSS1-201ENST00000421999 PPANQ9NQ55 473 aaKnown RBP10.47□□□□□ -0.73
CMSS1-201ENST00000421999 SOWAHDA6NJG2 315 aa10.46□□□□□ -0.73
CMSS1-201ENST00000421999 TRAPPC3O43617 180 aa10.46□□□□□ -0.73
CMSS1-201ENST00000421999 AKR1A1P14550 325 aa10.46□□□□□ -0.73
CMSS1-201ENST00000421999 RAG1P15918 1043 aa10.46□□□□□ -0.73
CMSS1-201ENST00000421999 KLRC1P26715 233 aa10.46□□□□□ -0.73
CMSS1-201ENST00000421999 ADCYAP1R1P41586 468 aa10.46□□□□□ -0.73
CMSS1-201ENST00000421999 CYP27A1Q02318 531 aa10.46□□□□□ -0.73
CMSS1-201ENST00000421999 PAK2Q13177 524 aa10.46□□□□□ -0.73
CMSS1-201ENST00000421999 SPRYD7Q5W111 196 aa10.46□□□□□ -0.73
CMSS1-201ENST00000421999 KRT39Q6A163 491 aa10.46□□□□□ -0.73
CMSS1-201ENST00000421999 PASD1Q8IV76 773 aa10.46□□□□□ -0.73
CMSS1-201ENST00000421999 ELOA2Q8IYF1 753 aaPredicted RBP10.46□□□□□ -0.73
CMSS1-201ENST00000421999 SREK1Q8WXA9 508 aaKnown RBP10.46□□□□□ -0.73
CMSS1-201ENST00000421999 COPS5Q92905 334 aa10.46□□□□□ -0.73
CMSS1-201ENST00000421999 TIPINQ9BVW5 301 aa10.46□□□□□ -0.73
CMSS1-201ENST00000421999 CALN1Q9BXU9 219 aa10.46□□□□□ -0.73
CMSS1-201ENST00000421999 PPP1R12CQ9BZL4 782 aa10.46□□□□□ -0.73
CMSS1-201ENST00000421999 AGAP1Q9UPQ3 857 aa10.46□□□□□ -0.73
CMSS1-201ENST00000421999 SNX9Q9Y5X1 595 aa10.46□□□□□ -0.73
CMSS1-201ENST00000421999 DUOX1Q9NRD9 1551 aa10.46□□□□□ -0.73
CMSS1-201ENST00000421999 ADCY3O60266 1144 aa10.46□□□□□ -0.74
CMSS1-201ENST00000421999 PSMD10O75832 226 aa10.46□□□□□ -0.74
CMSS1-201ENST00000421999 XPAP23025 273 aaPredicted RBP10.46□□□□□ -0.74
CMSS1-201ENST00000421999 EHHADHQ08426 723 aa10.46□□□□□ -0.74
CMSS1-201ENST00000421999 RBM43Q6ZSC3 357 aaKnown RBP10.46□□□□□ -0.74
CMSS1-201ENST00000421999 NIPA1Q7RTP0 329 aa10.46□□□□□ -0.74
CMSS1-201ENST00000421999 PORCNQ9H237 461 aa10.46□□□□□ -0.74
CMSS1-201ENST00000421999 HAUS4Q9H6D7 363 aa10.46□□□□□ -0.74
CMSS1-201ENST00000421999 KIF9Q9HAQ2 790 aa10.46□□□□□ -0.74
CMSS1-201ENST00000421999 COL20A1Q9P218 1284 aa10.46□□□□□ -0.74
CMSS1-201ENST00000421999 SCN7AQ01118 1682 aa10.46□□□□□ -0.74
CMSS1-201ENST00000421999 NID2Q14112 1375 aa10.46□□□□□ -0.74
CMSS1-201ENST00000421999 DPYSL4O14531 572 aa10.46□□□□□ -0.74
CMSS1-201ENST00000421999 ITGA4P13612 1032 aa10.46□□□□□ -0.74
CMSS1-201ENST00000421999 RARRES1P49788 294 aa10.46□□□□□ -0.74
CMSS1-201ENST00000421999 PPP2R5CQ13362 524 aa10.46□□□□□ -0.74
CMSS1-201ENST00000421999 PRAMEF19Q5SWL8 479 aa10.46□□□□□ -0.74
CMSS1-201ENST00000421999 GJC2Q5T442 439 aaPredicted RBP10.46□□□□□ -0.74
CMSS1-201ENST00000421999 C4orf19Q8IY42 314 aa10.46□□□□□ -0.74
CMSS1-201ENST00000421999 KCTD17Q8N5Z5 321 aa10.46□□□□□ -0.74
CMSS1-201ENST00000421999 CAPNS2Q96L46 248 aa10.46□□□□□ -0.74
CMSS1-201ENST00000421999 CARD6Q9BX69 1037 aa10.46□□□□□ -0.74
CMSS1-201ENST00000421999 PRMT7Q9NVM4 692 aaPredicted RBP10.46□□□□□ -0.74
CMSS1-201ENST00000421999 FEZ2Q9UHY8 353 aaPredicted RBP10.46□□□□□ -0.74
CMSS1-201ENST00000421999 UTP11Q9Y3A2 253 aaKnown RBP10.46□□□□□ -0.74
CMSS1-201ENST00000421999 UBIAD1Q9Y5Z9 338 aa10.46□□□□□ -0.74
CMSS1-201ENST00000421999 CYP3A7-CYP3A51PA0A087WV96 503 aa10.45□□□□□ -0.74
CMSS1-201ENST00000421999 H7C0C1 242 aa10.45□□□□□ -0.74
CMSS1-201ENST00000421999 ZNF286BP0CG31 522 aa10.45□□□□□ -0.74
CMSS1-201ENST00000421999 CYP3A7P24462 503 aa10.45□□□□□ -0.74
CMSS1-201ENST00000421999 ATP5OP48047 213 aa10.45□□□□□ -0.74
CMSS1-201ENST00000421999 HSD17B4P51659 736 aa10.45□□□□□ -0.74
CMSS1-201ENST00000421999 ELMOD1Q8N336 334 aa10.45□□□□□ -0.74
CMSS1-201ENST00000421999 CCNYQ8ND76 341 aa10.45□□□□□ -0.74
CMSS1-201ENST00000421999 UBLCP1Q8WVY7 318 aaPredicted RBP10.45□□□□□ -0.74
CMSS1-201ENST00000421999 ZNF560Q96MR9 790 aa10.45□□□□□ -0.74
CMSS1-201ENST00000421999 MAGED2Q9UNF1 606 aaPredicted RBP10.45□□□□□ -0.74
CMSS1-201ENST00000421999 EMSYQ7Z589 1322 aa10.45□□□□□ -0.74
CMSS1-201ENST00000421999 TBC1D8O95759 1140 aa10.45□□□□□ -0.74
CMSS1-201ENST00000421999 ACTN1P12814 892 aa10.45□□□□□ -0.74
CMSS1-201ENST00000421999 UBA1P22314 1058 aaKnown RBP10.45□□□□□ -0.74
CMSS1-201ENST00000421999 OR1G1P47890 313 aa10.45□□□□□ -0.74
CMSS1-201ENST00000421999 NOL9Q5SY16 702 aaKnown RBP10.45□□□□□ -0.74
CMSS1-201ENST00000421999 DEFB128Q7Z7B8 93 aa10.45□□□□□ -0.74
CMSS1-201ENST00000421999 C4orf32Q8N8J7 132 aa10.45□□□□□ -0.74
CMSS1-201ENST00000421999 MRPL47Q9HD33 250 aaKnown RBP10.45□□□□□ -0.74
CMSS1-201ENST00000421999 SPTLC3Q9NUV7 552 aa10.45□□□□□ -0.74
CMSS1-201ENST00000421999 HSPBP1Q9NZL4 362 aa10.45□□□□□ -0.74
CMSS1-201ENST00000421999 ZNF214Q9UL59 606 aaPredicted RBP10.45□□□□□ -0.74
CMSS1-201ENST00000421999 ZNF148Q9UQR1 794 aa10.45□□□□□ -0.74
CMSS1-201ENST00000421999 CHD4Q14839 1912 aa10.45□□□□□ -0.74
CMSS1-201ENST00000421999 MFAP3LO75121 409 aa10.45□□□□□ -0.74
CMSS1-201ENST00000421999 EIF4A3P38919 411 aaKnown RBP10.45□□□□□ -0.74
CMSS1-201ENST00000421999 E2F4Q16254 413 aa10.45□□□□□ -0.74
CMSS1-201ENST00000421999 ATF7IP2Q5U623 682 aa10.45□□□□□ -0.74
CMSS1-201ENST00000421999 GPR142Q7Z601 462 aa10.45□□□□□ -0.74
CMSS1-201ENST00000421999 TLK2Q86UE8 772 aa10.45□□□□□ -0.74
CMSS1-201ENST00000421999 TMEM35BQ8NCS4 154 aa10.45□□□□□ -0.74
CMSS1-201ENST00000421999 GSDMBQ8TAX9 411 aa10.45□□□□□ -0.74
CMSS1-201ENST00000421999 ETNPPLQ8TBG4 499 aa10.45□□□□□ -0.74
CMSS1-201ENST00000421999 MAIP1Q8WWC4 291 aa10.45□□□□□ -0.74
CMSS1-201ENST00000421999 TRIM11Q96F44 468 aa10.45□□□□□ -0.74
CMSS1-201ENST00000421999 FUCA2Q9BTY2 467 aa10.45□□□□□ -0.74
CMSS1-201ENST00000421999 SETD4Q9NVD3 440 aa10.45□□□□□ -0.74
CMSS1-201ENST00000421999 CWC15Q9P013 229 aaKnown RBP10.45□□□□□ -0.74
CMSS1-201ENST00000421999 A0A0G2JLL6 359 aaPredicted RBP10.44□□□□□ -0.74
CMSS1-201ENST00000421999 TTC26A0AVF1 554 aa10.44□□□□□ -0.74
CMSS1-201ENST00000421999 CAPN15O75808 1086 aa10.44□□□□□ -0.74
CMSS1-201ENST00000421999 ARL4AP40617 200 aa10.44□□□□□ -0.74
CMSS1-201ENST00000421999 PRRT2Q7Z6L0 340 aaPredicted RBP10.44□□□□□ -0.74
CMSS1-201ENST00000421999 ACRBPQ8NEB7 543 aa10.44□□□□□ -0.74
CMSS1-201ENST00000421999 CLEC4DQ8WXI8 215 aa10.44□□□□□ -0.74
CMSS1-201ENST00000421999 MTMR8Q96EF0 704 aa10.44□□□□□ -0.74
CMSS1-201ENST00000421999 SAR1BQ9Y6B6 198 aa10.44□□□□□ -0.74
CMSS1-201ENST00000421999 CSDE1O75534 798 aaKnown RBP10.44□□□□□ -0.74
CMSS1-201ENST00000421999 ACVR2BQ13705 512 aa10.44□□□□□ -0.74
CMSS1-201ENST00000421999 VEPH1Q14D04 833 aa10.44□□□□□ -0.74
CMSS1-201ENST00000421999 ALKBH5Q6P6C2 394 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms