RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 CNKSR2Q8WXI2 1034 aa14.39□□□□□ -0.11
MCF2L-213ENST00000421756 RFFLQ8WZ73 363 aa14.39□□□□□ -0.11
MCF2L-213ENST00000421756 PIK3CDO00329 1044 aa14.39□□□□□ -0.11
MCF2L-213ENST00000421756 ZBED4O75132 1171 aa14.39□□□□□ -0.11
MCF2L-213ENST00000421756 CD58P19256 250 aa14.39□□□□□ -0.11
MCF2L-213ENST00000421756 GMPSP49915 693 aaPredicted RBP14.39□□□□□ -0.11
MCF2L-213ENST00000421756 JAM2P57087 298 aa14.39□□□□□ -0.11
MCF2L-213ENST00000421756 MAGOHP61326 146 aaKnown RBP14.39□□□□□ -0.11
MCF2L-213ENST00000421756 DR1Q01658 176 aa14.39□□□□□ -0.11
MCF2L-213ENST00000421756 PGM5Q15124 567 aa14.39□□□□□ -0.11
MCF2L-213ENST00000421756 ANO5Q75V66 913 aa14.39□□□□□ -0.11
MCF2L-213ENST00000421756 FAM160B2Q86V87 743 aa14.39□□□□□ -0.11
MCF2L-213ENST00000421756 PPP1R13LQ8WUF5 828 aa14.39□□□□□ -0.11
MCF2L-213ENST00000421756 CCDC114Q96M63 670 aa14.39□□□□□ -0.11
MCF2L-213ENST00000421756 NUP85Q9BW27 656 aa14.39□□□□□ -0.11
MCF2L-213ENST00000421756 RASSF4Q9H2L5 321 aa14.39□□□□□ -0.11
MCF2L-213ENST00000421756 CLDN3O15551 220 aa14.38□□□□□ -0.11
MCF2L-213ENST00000421756 NR3C2P08235 984 aa14.38□□□□□ -0.11
MCF2L-213ENST00000421756 SMTNP53814 917 aa14.38□□□□□ -0.11
MCF2L-213ENST00000421756 HAUS1Q96CS2 278 aa14.38□□□□□ -0.11
MCF2L-213ENST00000421756 GPR88Q9GZN0 384 aa14.38□□□□□ -0.11
MCF2L-213ENST00000421756 GGT7Q9UJ14 662 aa14.38□□□□□ -0.11
MCF2L-213ENST00000421756 SLC16A3O15427 465 aaKnown RBP14.38□□□□□ -0.11
MCF2L-213ENST00000421756 DHX15O43143 795 aaKnown RBP14.38□□□□□ -0.11
MCF2L-213ENST00000421756 SHBGP04278 402 aa14.38□□□□□ -0.11
MCF2L-213ENST00000421756 PLS3P13797 630 aa14.38□□□□□ -0.11
MCF2L-213ENST00000421756 ADSSP30520 456 aa14.38□□□□□ -0.11
MCF2L-213ENST00000421756 CNTN2Q02246 1040 aa14.38□□□□□ -0.11
MCF2L-213ENST00000421756 RTKN2Q8IZC4 609 aa14.38□□□□□ -0.11
MCF2L-213ENST00000421756 CCDC26Q8TAB7 109 aa14.38□□□□□ -0.11
MCF2L-213ENST00000421756 FBXO25Q8TCJ0 367 aa14.38□□□□□ -0.11
MCF2L-213ENST00000421756 BORCS6Q96GS4 357 aa14.38□□□□□ -0.11
MCF2L-213ENST00000421756 PDCD2LQ9BRP1 358 aa14.38□□□□□ -0.11
MCF2L-213ENST00000421756 GDF3Q9NR23 364 aa14.38□□□□□ -0.11
MCF2L-213ENST00000421756 CNOT7Q9UIV1 285 aaKnown RBP14.38□□□□□ -0.11
MCF2L-213ENST00000421756 PSMC4P43686 418 aa14.38□□□□□ -0.11
MCF2L-213ENST00000421756 IFT88Q13099 833 aa14.38□□□□□ -0.11
MCF2L-213ENST00000421756 ANGEL2Q5VTE6 544 aaKnown RBP14.38□□□□□ -0.11
MCF2L-213ENST00000421756 KREMEN1Q96MU8 473 aa14.38□□□□□ -0.11
MCF2L-213ENST00000421756 DAAM1Q9Y4D1 1078 aa14.38□□□□□ -0.11
MCF2L-213ENST00000421756 GOLGA8KD6RF30 607 aa14.37□□□□□ -0.11
MCF2L-213ENST00000421756 PPFIA4O75335 1185 aa14.37□□□□□ -0.11
MCF2L-213ENST00000421756 ACSL3O95573 720 aa14.37□□□□□ -0.11
MCF2L-213ENST00000421756 PYGMP11217 842 aa14.37□□□□□ -0.11
MCF2L-213ENST00000421756 PPP1R7Q15435 360 aa14.37□□□□□ -0.11
MCF2L-213ENST00000421756 ZBTB41Q5SVQ8 909 aa14.37□□□□□ -0.11
MCF2L-213ENST00000421756 PIK3R5Q8WYR1 880 aa14.37□□□□□ -0.11
MCF2L-213ENST00000421756 PICK1Q9NRD5 415 aa14.37□□□□□ -0.11
MCF2L-213ENST00000421756 O00370 1275 aa14.37□□□□□ -0.11
MCF2L-213ENST00000421756 ZNF862O60290 1169 aa14.37□□□□□ -0.11
MCF2L-213ENST00000421756 CFHP08603 1231 aa14.37□□□□□ -0.11
MCF2L-213ENST00000421756 SETQ01105 290 aaPredicted RBP14.37□□□□□ -0.11
MCF2L-213ENST00000421756 ORC1Q13415 861 aa14.37□□□□□ -0.11
MCF2L-213ENST00000421756 UAP1Q16222 522 aaPredicted RBP14.37□□□□□ -0.11
MCF2L-213ENST00000421756 SCARA5Q6ZMJ2 495 aa14.37□□□□□ -0.11
MCF2L-213ENST00000421756 INTS8Q75QN2 995 aaKnown RBP14.37□□□□□ -0.11
MCF2L-213ENST00000421756 PBKQ96KB5 322 aa14.37□□□□□ -0.11
MCF2L-213ENST00000421756 FNBP1Q96RU3 617 aa14.37□□□□□ -0.11
MCF2L-213ENST00000421756 TAOK3Q9H2K8 898 aa14.37□□□□□ -0.11
MCF2L-213ENST00000421756 TBK1Q9UHD2 729 aa14.37□□□□□ -0.11
MCF2L-213ENST00000421756 GOLGA6L10A0A0M3HER8 536 aa14.37□□□□□ -0.11
MCF2L-213ENST00000421756 EIF3DO15371 548 aaKnown RBP eCLIP14.37□□□□□ -0.113e-6■□□□□ 9
MCF2L-213ENST00000421756 MMP14P50281 582 aa14.37□□□□□ -0.11
MCF2L-213ENST00000421756 PPATQ06203 517 aa14.37□□□□□ -0.11
MCF2L-213ENST00000421756 SYCE1Q8N0S2 351 aa14.37□□□□□ -0.11
MCF2L-213ENST00000421756 ZNF526Q8TF50 670 aaPredicted RBP14.37□□□□□ -0.11
MCF2L-213ENST00000421756 FAM169AQ9Y6X4 670 aa14.37□□□□□ -0.11
MCF2L-213ENST00000421756 PI4K2BG5E9Z4 385 aa14.36□□□□□ -0.11
MCF2L-213ENST00000421756 LIG4P49917 911 aa14.36□□□□□ -0.11
MCF2L-213ENST00000421756 LRRC14Q15048 493 aa14.36□□□□□ -0.11
MCF2L-213ENST00000421756 FMO2Q99518 471 aa14.36□□□□□ -0.11
MCF2L-213ENST00000421756 C11orf70Q9BRQ4 267 aa14.36□□□□□ -0.11
MCF2L-213ENST00000421756 ANAPC7Q9UJX3 599 aa14.36□□□□□ -0.11
MCF2L-213ENST00000421756 ANKRD31Q8N7Z5 1873 aa14.36□□□□□ -0.11
MCF2L-213ENST00000421756 ADGRA3Q8IWK6 1321 aa14.36□□□□□ -0.11
MCF2L-213ENST00000421756 PHF20L1A8MW92 1017 aa14.36□□□□□ -0.11
MCF2L-213ENST00000421756 PIAS1O75925 651 aa14.36□□□□□ -0.11
MCF2L-213ENST00000421756 SRGAP2CP0DJJ0 459 aa14.36□□□□□ -0.11
MCF2L-213ENST00000421756 BMT2Q1RMZ1 405 aa14.36□□□□□ -0.11
MCF2L-213ENST00000421756 FBXW10Q5XX13 1052 aa14.36□□□□□ -0.11
MCF2L-213ENST00000421756 POTEAQ6S8J7 498 aa14.36□□□□□ -0.11
MCF2L-213ENST00000421756 SV2AQ7L0J3 742 aa14.36□□□□□ -0.11
MCF2L-213ENST00000421756 CCDC60Q8IWA6 550 aaPredicted RBP14.36□□□□□ -0.11
MCF2L-213ENST00000421756 IQCKQ8N0W5 287 aa14.36□□□□□ -0.11
MCF2L-213ENST00000421756 ANKRD35Q8N283 1001 aa14.36□□□□□ -0.11
MCF2L-213ENST00000421756 ZNF564Q8TBZ8 553 aaPredicted RBP14.36□□□□□ -0.11
MCF2L-213ENST00000421756 MRIQ9BWK5 157 aa14.36□□□□□ -0.11
MCF2L-213ENST00000421756 CNOT8Q9UFF9 292 aaKnown RBP14.36□□□□□ -0.11
MCF2L-213ENST00000421756 ASIC3Q9UHC3 531 aa14.36□□□□□ -0.11
MCF2L-213ENST00000421756 PNMA2Q9UL42 364 aa14.36□□□□□ -0.11
MCF2L-213ENST00000421756 ARFGEF1Q9Y6D6 1849 aa14.36□□□□□ -0.11
MCF2L-213ENST00000421756 GUCY2CP25092 1073 aa14.35□□□□□ -0.11
MCF2L-213ENST00000421756 PTGER2P43116 358 aa14.35□□□□□ -0.11
MCF2L-213ENST00000421756 POLGP54098 1239 aaPredicted RBP14.35□□□□□ -0.11
MCF2L-213ENST00000421756 ZNF772Q68DY9 489 aaPredicted RBP14.35□□□□□ -0.11
MCF2L-213ENST00000421756 GMLQ99445 158 aa14.35□□□□□ -0.11
MCF2L-213ENST00000421756 PSD3Q9NYI0 1048 aa14.35□□□□□ -0.11
MCF2L-213ENST00000421756 DBR1Q9UK59 544 aaKnown RBP14.35□□□□□ -0.11
MCF2L-213ENST00000421756 ODF2LQ9ULJ1 636 aa14.35□□□□□ -0.11
MCF2L-213ENST00000421756 TBX20Q9UMR3 447 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms