RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 POMCP01189 267 aa19.29■□□□□ 0.68
MSH6-203ENST00000420813 EPCAMP16422 314 aa19.29■□□□□ 0.68
MSH6-203ENST00000420813 NHLH1Q02575 133 aa19.29■□□□□ 0.68
MSH6-203ENST00000420813 SAFBQ15424 915 aaKnown RBP eCLIP19.29■□□□□ 0.68
MSH6-203ENST00000420813 AMHR2Q16671 573 aa19.29■□□□□ 0.68
MSH6-203ENST00000420813 RARS2Q5T160 578 aaKnown RBP19.29■□□□□ 0.68
MSH6-203ENST00000420813 SUGP1Q8IWZ8 645 aaKnown RBP19.29■□□□□ 0.68
MSH6-203ENST00000420813 HACE1Q8IYU2 909 aa19.29■□□□□ 0.68
MSH6-203ENST00000420813 FBXL6Q8N531 539 aa19.29■□□□□ 0.68
MSH6-203ENST00000420813 ASIC4Q96FT7 647 aa19.29■□□□□ 0.68
MSH6-203ENST00000420813 EIF2AQ9BY44 585 aaKnown RBP19.29■□□□□ 0.68
MSH6-203ENST00000420813 TSHZ2Q9NRE2 1034 aa19.29■□□□□ 0.68
MSH6-203ENST00000420813 CDH22Q9UJ99 828 aa19.29■□□□□ 0.68
MSH6-203ENST00000420813 ZMYM2Q9UBW7 1377 aa19.29■□□□□ 0.68
MSH6-203ENST00000420813 ARL5CA6NH57 179 aa19.28■□□□□ 0.68
MSH6-203ENST00000420813 POTEMA6NI47 508 aa19.28■□□□□ 0.68
MSH6-203ENST00000420813 LILRB3O75022 631 aa19.28■□□□□ 0.68
MSH6-203ENST00000420813 ARF4P18085 180 aaPredicted RBP19.28■□□□□ 0.68
MSH6-203ENST00000420813 GLRA2P23416 452 aa19.28■□□□□ 0.68
MSH6-203ENST00000420813 SP100P23497 879 aaPredicted RBP19.28■□□□□ 0.68
MSH6-203ENST00000420813 FOSBP53539 338 aa19.28■□□□□ 0.68
MSH6-203ENST00000420813 DSC1Q08554 894 aa19.28■□□□□ 0.68
MSH6-203ENST00000420813 ORC2Q13416 577 aaPredicted RBP19.28■□□□□ 0.68
MSH6-203ENST00000420813 ATAT1Q5SQI0 421 aa19.28■□□□□ 0.68
MSH6-203ENST00000420813 CABP7Q86V35 215 aa19.28■□□□□ 0.68
MSH6-203ENST00000420813 COLGALT2Q8IYK4 626 aa19.28■□□□□ 0.68
MSH6-203ENST00000420813 CPB2Q96IY4 423 aa19.28■□□□□ 0.68
MSH6-203ENST00000420813 PRRX2Q99811 253 aa19.28■□□□□ 0.68
MSH6-203ENST00000420813 TMEM60Q9H2L4 133 aa19.28■□□□□ 0.68
MSH6-203ENST00000420813 SFXN1Q9H9B4 322 aa19.28■□□□□ 0.68
MSH6-203ENST00000420813 TUFT1Q9NNX1 390 aa19.28■□□□□ 0.68
MSH6-203ENST00000420813 MRPL17Q9NRX2 175 aaKnown RBP19.28■□□□□ 0.68
MSH6-203ENST00000420813 LIMCH1Q9UPQ0 1083 aa19.28■□□□□ 0.68
MSH6-203ENST00000420813 USTQ9Y2C2 406 aa19.28■□□□□ 0.68
MSH6-203ENST00000420813 SSX2IPQ9Y2D8 614 aa19.28■□□□□ 0.68
MSH6-203ENST00000420813 GIT1Q9Y2X7 761 aa19.28■□□□□ 0.68
MSH6-203ENST00000420813 C2CD4DB7Z1M9 353 aa19.27■□□□□ 0.68
MSH6-203ENST00000420813 SOD2P04179 222 aa19.27■□□□□ 0.68
MSH6-203ENST00000420813 SPATA31C1P0DKV0 1188 aa19.27■□□□□ 0.68
MSH6-203ENST00000420813 MLH1P40692 756 aa19.27■□□□□ 0.68
MSH6-203ENST00000420813 ZBTB33Q86T24 672 aa19.27■□□□□ 0.68
MSH6-203ENST00000420813 C12orf76Q8N812 135 aaPredicted RBP19.27■□□□□ 0.68
MSH6-203ENST00000420813 MCPH1Q8NEM0 835 aa19.27■□□□□ 0.68
MSH6-203ENST00000420813 PIGOQ8TEQ8 1089 aa19.27■□□□□ 0.68
MSH6-203ENST00000420813 KLHL5Q96PQ7 755 aa19.27■□□□□ 0.68
MSH6-203ENST00000420813 GAD1Q99259 594 aa19.27■□□□□ 0.68
MSH6-203ENST00000420813 LLPHQ9BRT6 129 aaKnown RBP19.27■□□□□ 0.68
MSH6-203ENST00000420813 HERC2P3Q9BVR0 1158 aa19.27■□□□□ 0.68
MSH6-203ENST00000420813 TRIM6Q9C030 488 aaPredicted RBP19.27■□□□□ 0.68
MSH6-203ENST00000420813 POLR3FQ9H1D9 316 aaPredicted RBP19.27■□□□□ 0.68
MSH6-203ENST00000420813 MARCH5Q9NX47 278 aa19.27■□□□□ 0.68
MSH6-203ENST00000420813 DBR1Q9UK59 544 aaKnown RBP19.27■□□□□ 0.68
MSH6-203ENST00000420813 SORCS3Q9UPU3 1222 aa19.27■□□□□ 0.68
MSH6-203ENST00000420813 USO1O60763 962 aaKnown RBP19.26■□□□□ 0.67
MSH6-203ENST00000420813 EFEMP2O95967 443 aa19.26■□□□□ 0.67
MSH6-203ENST00000420813 URODP06132 367 aa19.26■□□□□ 0.67
MSH6-203ENST00000420813 CNPP09543 421 aaKnown RBP19.26■□□□□ 0.67
MSH6-203ENST00000420813 KLRC2P26717 231 aa19.26■□□□□ 0.67
MSH6-203ENST00000420813 MCM7P33993 719 aa19.26■□□□□ 0.67
MSH6-203ENST00000420813 CLCN4P51793 760 aa19.26■□□□□ 0.67
MSH6-203ENST00000420813 MTMR3Q13615 1198 aa19.26■□□□□ 0.67
MSH6-203ENST00000420813 SLC27A1Q6PCB7 646 aa19.26■□□□□ 0.67
MSH6-203ENST00000420813 UBALD2Q8IYN6 164 aa19.26■□□□□ 0.67
MSH6-203ENST00000420813 RNF168Q8IYW5 571 aaPredicted RBP19.26■□□□□ 0.67
MSH6-203ENST00000420813 ZDHHC14Q8IZN3 488 aa19.26■□□□□ 0.67
MSH6-203ENST00000420813 TDRD5Q8NAT2 981 aaKnown RBP19.26■□□□□ 0.67
MSH6-203ENST00000420813 KREMEN2Q8NCW0 462 aa19.26■□□□□ 0.67
MSH6-203ENST00000420813 C8orf76Q96K31 380 aa19.26■□□□□ 0.67
MSH6-203ENST00000420813 PRIMPOLQ96LW4 560 aa19.26■□□□□ 0.67
MSH6-203ENST00000420813 POLR3CQ9BUI4 534 aaPredicted RBP19.26■□□□□ 0.67
MSH6-203ENST00000420813 RNF39Q9H2S5 420 aa19.26■□□□□ 0.67
MSH6-203ENST00000420813 PRG3Q9Y2Y8 225 aaPredicted RBP19.26■□□□□ 0.67
MSH6-203ENST00000420813 HES2Q9Y543 173 aa19.26■□□□□ 0.67
MSH6-203ENST00000420813 A0A1B0GUA9 196 aa19.25■□□□□ 0.67
MSH6-203ENST00000420813 NR1I2O75469 434 aa19.25■□□□□ 0.67
MSH6-203ENST00000420813 SEC24BO95487 1268 aa19.25■□□□□ 0.67
MSH6-203ENST00000420813 SSBP05455 408 aaKnown RBP eCLIP19.25■□□□□ 0.67
MSH6-203ENST00000420813 WEE2P0C1S8 567 aa19.25■□□□□ 0.67
MSH6-203ENST00000420813 OR1G1P47890 313 aa19.25■□□□□ 0.67
MSH6-203ENST00000420813 SCNN1GP51170 649 aa19.25■□□□□ 0.67
MSH6-203ENST00000420813 GUCY1B3Q02153 619 aa19.25■□□□□ 0.67
MSH6-203ENST00000420813 PPP4R3CPQ6ZMV5 832 aa19.25■□□□□ 0.67
MSH6-203ENST00000420813 GPR149Q86SP6 731 aa19.25■□□□□ 0.67
MSH6-203ENST00000420813 CATSPER3Q86XQ3 398 aa19.25■□□□□ 0.67
MSH6-203ENST00000420813 PLCD3Q8N3E9 789 aa19.25■□□□□ 0.67
MSH6-203ENST00000420813 ZFP42Q96MM3 310 aa19.25■□□□□ 0.67
MSH6-203ENST00000420813 NACC1Q96RE7 527 aa19.25■□□□□ 0.67
MSH6-203ENST00000420813 RPS6KC1Q96S38 1066 aa19.25■□□□□ 0.67
MSH6-203ENST00000420813 FOXP1Q9H334 677 aaPredicted RBP19.25■□□□□ 0.67
MSH6-203ENST00000420813 NXF3Q9H4D5 531 aaKnown RBP19.25■□□□□ 0.67
MSH6-203ENST00000420813 PRMT7Q9NVM4 692 aaPredicted RBP19.25■□□□□ 0.67
MSH6-203ENST00000420813 MIOSQ9NXC5 875 aa19.25■□□□□ 0.67
MSH6-203ENST00000420813 B4GALT5O43286 388 aa19.24■□□□□ 0.67
MSH6-203ENST00000420813 MED24O75448 989 aa19.24■□□□□ 0.67
MSH6-203ENST00000420813 ADH1AP07327 375 aa19.24■□□□□ 0.67
MSH6-203ENST00000420813 OR52Z1P0C646 297 aa19.24■□□□□ 0.67
MSH6-203ENST00000420813 ATP2B1P20020 1258 aa19.24■□□□□ 0.67
MSH6-203ENST00000420813 RPA1P27694 616 aa19.24■□□□□ 0.67
MSH6-203ENST00000420813 CDCA2Q69YH5 1023 aaPredicted RBP19.24■□□□□ 0.67
MSH6-203ENST00000420813 KANK3Q6NY19 840 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms