RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 A0A1B0GUA9 196 aa13.67□□□□□ -0.22
TMEM53-206ENST00000420706 TRIM43BA6NCK2 446 aa13.67□□□□□ -0.22
TMEM53-206ENST00000420706 SMTNL1A8MU46 457 aa13.67□□□□□ -0.22
TMEM53-206ENST00000420706 ABLIM1O14639 778 aa13.67□□□□□ -0.22
TMEM53-206ENST00000420706 IKBKBO14920 756 aa13.67□□□□□ -0.22
TMEM53-206ENST00000420706 HNRNPDLO14979 420 aaKnown RBP13.67□□□□□ -0.22
TMEM53-206ENST00000420706 KIAA0355O15063 1070 aa13.67□□□□□ -0.22
TMEM53-206ENST00000420706 GPR182O15218 404 aa13.67□□□□□ -0.22
TMEM53-206ENST00000420706 TOM1L1O75674 476 aa13.67□□□□□ -0.22
TMEM53-206ENST00000420706 GHRP10912 638 aa13.67□□□□□ -0.22
TMEM53-206ENST00000420706 GARTP22102 1010 aa13.67□□□□□ -0.22
TMEM53-206ENST00000420706 PROZP22891 400 aa13.67□□□□□ -0.22
TMEM53-206ENST00000420706 HOXA11P31270 313 aaPredicted RBP13.67□□□□□ -0.22
TMEM53-206ENST00000420706 CD52P31358 61 aa13.67□□□□□ -0.22
TMEM53-206ENST00000420706 CYP2C18P33260 490 aa13.67□□□□□ -0.22
TMEM53-206ENST00000420706 NCBP1Q09161 790 aaKnown RBP13.67□□□□□ -0.22
TMEM53-206ENST00000420706 ADAM9Q13443 819 aa13.67□□□□□ -0.22
TMEM53-206ENST00000420706 ATF7IP2Q5U623 682 aa13.67□□□□□ -0.22
TMEM53-206ENST00000420706 SPATA1Q5VX52 437 aa13.67□□□□□ -0.22
TMEM53-206ENST00000420706 EEF1DP3Q658K8 133 aa13.67□□□□□ -0.22
TMEM53-206ENST00000420706 SLFN12LQ6IEE8 588 aa13.67□□□□□ -0.22
TMEM53-206ENST00000420706 C12orf56Q8IXR9 622 aa13.67□□□□□ -0.22
TMEM53-206ENST00000420706 ZC3H3Q8IXZ2 948 aaKnown RBP13.67□□□□□ -0.22
TMEM53-206ENST00000420706 AOPEPQ8N6M6 819 aa13.67□□□□□ -0.22
TMEM53-206ENST00000420706 GOLGA5Q8TBA6 731 aa13.67□□□□□ -0.22
TMEM53-206ENST00000420706 TMEM174Q8WUU8 243 aa13.67□□□□□ -0.22
TMEM53-206ENST00000420706 TRIM43Q96BQ3 446 aaPredicted RBP13.67□□□□□ -0.22
TMEM53-206ENST00000420706 HAPLN2Q9GZV7 340 aa13.67□□□□□ -0.22
TMEM53-206ENST00000420706 ERVK-5Q9HDB9 667 aa13.67□□□□□ -0.22
TMEM53-206ENST00000420706 DMAC2Q9NW81 257 aa13.67□□□□□ -0.22
TMEM53-206ENST00000420706 PADI3Q9ULW8 664 aa13.67□□□□□ -0.22
TMEM53-206ENST00000420706 NBNO60934 754 aa13.66□□□□□ -0.22
TMEM53-206ENST00000420706 PARNO95453 639 aaKnown RBP13.66□□□□□ -0.22
TMEM53-206ENST00000420706 TIMP1P01033 207 aa13.66□□□□□ -0.22
TMEM53-206ENST00000420706 NR3C1P04150 777 aa13.66□□□□□ -0.22
TMEM53-206ENST00000420706 RPL13P26373 211 aaKnown RBP13.66□□□□□ -0.22
TMEM53-206ENST00000420706 CCL23P55773 120 aa13.66□□□□□ -0.22
TMEM53-206ENST00000420706 FKBP3Q00688 224 aaKnown RBP13.66□□□□□ -0.22
TMEM53-206ENST00000420706 MYL5Q02045 173 aa13.66□□□□□ -0.22
TMEM53-206ENST00000420706 MLLT1Q03111 559 aaPredicted RBP13.66□□□□□ -0.22
TMEM53-206ENST00000420706 NFX1Q12986 1120 aaKnown RBP13.66□□□□□ -0.22
TMEM53-206ENST00000420706 MYBPC2Q14324 1141 aa13.66□□□□□ -0.22
TMEM53-206ENST00000420706 CDR2LQ86X02 465 aaPredicted RBP13.66□□□□□ -0.22
TMEM53-206ENST00000420706 SLC9A9Q8IVB4 645 aa13.66□□□□□ -0.22
TMEM53-206ENST00000420706 SCLYQ96I15 445 aa13.66□□□□□ -0.22
TMEM53-206ENST00000420706 CBWD1Q9BRT8 395 aa13.66□□□□□ -0.22
TMEM53-206ENST00000420706 SRRTQ9BXP5 876 aaKnown RBP13.66□□□□□ -0.22
TMEM53-206ENST00000420706 WNT8AQ9H1J5 351 aa13.66□□□□□ -0.22
TMEM53-206ENST00000420706 RBSNQ9H1K0 784 aa13.66□□□□□ -0.22
TMEM53-206ENST00000420706 PCIF1Q9H4Z3 704 aa13.66□□□□□ -0.22
TMEM53-206ENST00000420706 PDZD7Q9H5P4 517 aa13.66□□□□□ -0.22
TMEM53-206ENST00000420706 CHST12Q9NRB3 414 aa13.66□□□□□ -0.22
TMEM53-206ENST00000420706 AGPAT5Q9NUQ2 364 aa13.66□□□□□ -0.22
TMEM53-206ENST00000420706 ALPK3Q96L96 1907 aa13.66□□□□□ -0.22
TMEM53-206ENST00000420706 A0A0B4J269 797 aa13.65□□□□□ -0.22
TMEM53-206ENST00000420706 BECN2A8MW95 431 aa13.65□□□□□ -0.22
TMEM53-206ENST00000420706 N4BP3O15049 544 aa13.65□□□□□ -0.22
TMEM53-206ENST00000420706 CETN3O15182 167 aa13.65□□□□□ -0.22
TMEM53-206ENST00000420706 CLDN3O15551 220 aa13.65□□□□□ -0.22
TMEM53-206ENST00000420706 NR2F2P24468 414 aa13.65□□□□□ -0.22
TMEM53-206ENST00000420706 ITGB8P26012 769 aa13.65□□□□□ -0.22
TMEM53-206ENST00000420706 RGS19P49795 217 aa13.65□□□□□ -0.22
TMEM53-206ENST00000420706 MCL1Q07820 350 aa13.65□□□□□ -0.22
TMEM53-206ENST00000420706 PAK2Q13177 524 aa13.65□□□□□ -0.22
TMEM53-206ENST00000420706 TPD52L1Q16890 204 aaPredicted RBP13.65□□□□□ -0.22
TMEM53-206ENST00000420706 TMEM132AQ24JP5 1023 aa13.65□□□□□ -0.22
TMEM53-206ENST00000420706 ARMCX5Q6P1M9 558 aa13.65□□□□□ -0.22
TMEM53-206ENST00000420706 NOTUMQ6P988 496 aa13.65□□□□□ -0.22
TMEM53-206ENST00000420706 MPZL3Q6UWV2 235 aa13.65□□□□□ -0.22
TMEM53-206ENST00000420706 LRRC55Q6ZSA7 311 aa13.65□□□□□ -0.22
TMEM53-206ENST00000420706 FILIP1Q7Z7B0 1213 aa13.65□□□□□ -0.22
TMEM53-206ENST00000420706 ZBTB33Q86T24 672 aa13.65□□□□□ -0.22
TMEM53-206ENST00000420706 LUZP1Q86V48 1076 aa13.65□□□□□ -0.22
TMEM53-206ENST00000420706 CSGALNACT2Q8N6G5 542 aa13.65□□□□□ -0.22
TMEM53-206ENST00000420706 RNF214Q8ND24 703 aa13.65□□□□□ -0.22
TMEM53-206ENST00000420706 POMGNT1Q8WZA1 660 aa13.65□□□□□ -0.22
TMEM53-206ENST00000420706 TCHPQ9BT92 498 aa13.65□□□□□ -0.22
TMEM53-206ENST00000420706 HTATIP2Q9BUP3 242 aa13.65□□□□□ -0.22
TMEM53-206ENST00000420706 TMX1Q9H3N1 280 aa13.65□□□□□ -0.22
TMEM53-206ENST00000420706 PRDM5Q9NQX1 630 aaPredicted RBP13.65□□□□□ -0.22
TMEM53-206ENST00000420706 SAMSN1Q9NSI8 373 aaKnown RBP13.65□□□□□ -0.22
TMEM53-206ENST00000420706 FANCLQ9NW38 375 aa13.65□□□□□ -0.22
TMEM53-206ENST00000420706 HSPBP1Q9NZL4 362 aa13.65□□□□□ -0.22
TMEM53-206ENST00000420706 PIN4Q9Y237 131 aaKnown RBP13.65□□□□□ -0.22
TMEM53-206ENST00000420706 NFE2L3Q9Y4A8 694 aa13.65□□□□□ -0.22
TMEM53-206ENST00000420706 KIAA0391O15091 583 aaKnown RBP13.64□□□□□ -0.23
TMEM53-206ENST00000420706 FGFR1OPO95684 399 aaKnown RBP13.64□□□□□ -0.23
TMEM53-206ENST00000420706 CXCL10P02778 98 aa13.64□□□□□ -0.23
TMEM53-206ENST00000420706 RAG1P15918 1043 aa13.64□□□□□ -0.23
TMEM53-206ENST00000420706 MATR3P43243 847 aaKnown RBP eCLIP13.64□□□□□ -0.23
TMEM53-206ENST00000420706 CYP2J2P51589 502 aa13.64□□□□□ -0.23
TMEM53-206ENST00000420706 DSC3Q14574 896 aa13.64□□□□□ -0.23
TMEM53-206ENST00000420706 UBXN11Q5T124 520 aa13.64□□□□□ -0.23
TMEM53-206ENST00000420706 XXYLT1Q8NBI6 393 aa13.64□□□□□ -0.23
TMEM53-206ENST00000420706 ZSWIM2Q8NEG5 633 aa13.64□□□□□ -0.23
TMEM53-206ENST00000420706 NOC3LQ8WTT2 800 aaKnown RBP13.64□□□□□ -0.23
TMEM53-206ENST00000420706 EEF2KMTQ96G04 330 aa13.64□□□□□ -0.23
TMEM53-206ENST00000420706 CEP63Q96MT8 703 aa13.64□□□□□ -0.23
TMEM53-206ENST00000420706 CDT1Q9H211 546 aa13.64□□□□□ -0.23
TMEM53-206ENST00000420706 HSD3B7Q9H2F3 369 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms