RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 MED4Q9NPJ6 270 aa9.02□□□□□ -0.97
UBR4-206ENST00000419533 SPTLC3Q9NUV7 552 aa9.02□□□□□ -0.97
UBR4-206ENST00000419533 ZNF609O15014 1411 aa9.02□□□□□ -0.97
UBR4-206ENST00000419533 WNT10BO00744 389 aa9.02□□□□□ -0.97
UBR4-206ENST00000419533 ZNF189O75820 626 aaPredicted RBP9.02□□□□□ -0.97
UBR4-206ENST00000419533 GNGT1P63211 74 aa9.02□□□□□ -0.97
UBR4-206ENST00000419533 KCNH2Q12809 1159 aa9.02□□□□□ -0.97
UBR4-206ENST00000419533 XRRA1Q6P2D8 792 aa9.02□□□□□ -0.97
UBR4-206ENST00000419533 TRIM72Q6ZMU5 477 aa9.02□□□□□ -0.97
UBR4-206ENST00000419533 HAUS6Q7Z4H7 955 aa9.02□□□□□ -0.97
UBR4-206ENST00000419533 IFT43Q96FT9 208 aa9.02□□□□□ -0.97
UBR4-206ENST00000419533 LGALS16A8MUM7 142 aa9.01□□□□□ -0.97
UBR4-206ENST00000419533 SART1O43290 800 aaKnown RBP9.01□□□□□ -0.97
UBR4-206ENST00000419533 MT-ND3P03897 115 aa9.01□□□□□ -0.97
UBR4-206ENST00000419533 CYP27A1Q02318 531 aa9.01□□□□□ -0.97
UBR4-206ENST00000419533 PCGF5Q86SE9 256 aa9.01□□□□□ -0.97
UBR4-206ENST00000419533 TEX2Q8IWB9 1127 aa9.01□□□□□ -0.97
UBR4-206ENST00000419533 ACRBPQ8NEB7 543 aa9.01□□□□□ -0.97
UBR4-206ENST00000419533 INTS2Q9H0H0 1204 aaKnown RBP9.01□□□□□ -0.97
UBR4-206ENST00000419533 ANAPC7Q9UJX3 599 aa9.01□□□□□ -0.97
UBR4-206ENST00000419533 SOWAHDA6NJG2 315 aa9.01□□□□□ -0.97
UBR4-206ENST00000419533 ADM5C9JUS6 153 aa9.01□□□□□ -0.97
UBR4-206ENST00000419533 MAFGO15525 162 aa9.01□□□□□ -0.97
UBR4-206ENST00000419533 NR3C2P08235 984 aa9.01□□□□□ -0.97
UBR4-206ENST00000419533 GNA15P30679 374 aa9.01□□□□□ -0.97
UBR4-206ENST00000419533 RFC5P40937 340 aa9.01□□□□□ -0.97
UBR4-206ENST00000419533 DBN1Q16643 649 aa9.01□□□□□ -0.97
UBR4-206ENST00000419533 CYP4F22Q6NT55 531 aa9.01□□□□□ -0.97
UBR4-206ENST00000419533 CC2D1AQ6P1N0 951 aaPredicted RBP9.01□□□□□ -0.97
UBR4-206ENST00000419533 CENPUQ71F23 418 aa9.01□□□□□ -0.97
UBR4-206ENST00000419533 DCLK2Q8N568 766 aa9.01□□□□□ -0.97
UBR4-206ENST00000419533 HVCN1Q96D96 273 aa9.01□□□□□ -0.97
UBR4-206ENST00000419533 CFAP36Q96G28 342 aa9.01□□□□□ -0.97
UBR4-206ENST00000419533 RABEP2Q9H5N1 569 aa9.01□□□□□ -0.97
UBR4-206ENST00000419533 EPB41L5Q9HCM4 733 aa9.01□□□□□ -0.97
UBR4-206ENST00000419533 GJB4Q9NTQ9 266 aa9.01□□□□□ -0.97
UBR4-206ENST00000419533 KLHL8Q9P2G9 620 aaPredicted RBP9.01□□□□□ -0.97
UBR4-206ENST00000419533 ADAMTS1Q9UHI8 967 aa9.01□□□□□ -0.97
UBR4-206ENST00000419533 NEMP1O14524 444 aa9.01□□□□□ -0.97
UBR4-206ENST00000419533 ASAP2O43150 1006 aa9.01□□□□□ -0.97
UBR4-206ENST00000419533 PAPOLAP51003 745 aaKnown RBP9.01□□□□□ -0.97
UBR4-206ENST00000419533 ATP2C1P98194 919 aaPredicted RBP9.01□□□□□ -0.97
UBR4-206ENST00000419533 DR1Q01658 176 aa9.01□□□□□ -0.97
UBR4-206ENST00000419533 GUF1Q8N442 669 aaKnown RBP9.01□□□□□ -0.97
UBR4-206ENST00000419533 SRBD1Q8N5C6 995 aaKnown RBP9.01□□□□□ -0.97
UBR4-206ENST00000419533 TRPV6Q9H1D0 765 aa9.01□□□□□ -0.97
UBR4-206ENST00000419533 PRR12Q9ULL5 1215 aa9.01□□□□□ -0.97
UBR4-206ENST00000419533 PITPNM2Q9BZ72 1349 aa9.01□□□□□ -0.97
UBR4-206ENST00000419533 CA12O43570 354 aa9.01□□□□□ -0.97
UBR4-206ENST00000419533 MFAP3LO75121 409 aa9.01□□□□□ -0.97
UBR4-206ENST00000419533 HSPA8P11142 646 aaKnown RBP9.01□□□□□ -0.97
UBR4-206ENST00000419533 MAP2K2P36507 400 aa9.01□□□□□ -0.97
UBR4-206ENST00000419533 CPT1AP50416 773 aa9.01□□□□□ -0.97
UBR4-206ENST00000419533 RAD51Q06609 339 aa9.01□□□□□ -0.97
UBR4-206ENST00000419533 EFHC2Q5JST6 749 aa9.01□□□□□ -0.97
UBR4-206ENST00000419533 SPATS2Q86XZ4 545 aaKnown RBP9.01□□□□□ -0.97
UBR4-206ENST00000419533 SDCCAG3Q96C92 435 aa9.01□□□□□ -0.97
UBR4-206ENST00000419533 FAF2Q96CS3 445 aa9.01□□□□□ -0.97
UBR4-206ENST00000419533 FSD1LQ9BXM9 530 aa9.01□□□□□ -0.97
UBR4-206ENST00000419533 MAGEB5Q9BZ81 275 aa9.01□□□□□ -0.97
UBR4-206ENST00000419533 PDGFDQ9GZP0 370 aaPredicted RBP9.01□□□□□ -0.97
UBR4-206ENST00000419533 FGFR2P21802 821 aa9□□□□□ -0.97
UBR4-206ENST00000419533 KLRK1P26718 216 aa9□□□□□ -0.97
UBR4-206ENST00000419533 ADORA2BP29275 332 aa9□□□□□ -0.97
UBR4-206ENST00000419533 BTBD8Q5XKL5 378 aa9□□□□□ -0.97
UBR4-206ENST00000419533 SPOPLQ6IQ16 392 aa9□□□□□ -0.97
UBR4-206ENST00000419533 OPTNQ96CV9 577 aa9□□□□□ -0.97
UBR4-206ENST00000419533 ZNF668Q96K58 619 aaPredicted RBP9□□□□□ -0.97
UBR4-206ENST00000419533 KCND2Q9NZV8 630 aa9□□□□□ -0.97
UBR4-206ENST00000419533 PRCPP42785 496 aa9□□□□□ -0.97
UBR4-206ENST00000419533 BBS9Q3SYG4 887 aa9□□□□□ -0.97
UBR4-206ENST00000419533 SH3TC2Q8TF17 1288 aa9□□□□□ -0.97
UBR4-206ENST00000419533 SAAL1Q96ER3 474 aa9□□□□□ -0.97
UBR4-206ENST00000419533 MMTAG2Q9BU76 263 aaKnown RBP9□□□□□ -0.97
UBR4-206ENST00000419533 CYP26B1Q9NR63 512 aa9□□□□□ -0.97
UBR4-206ENST00000419533 IP6K2Q9UHH9 426 aa9□□□□□ -0.97
UBR4-206ENST00000419533 MOSPD1Q9UJG1 213 aa9□□□□□ -0.97
UBR4-206ENST00000419533 ATP8B1O43520 1251 aa9□□□□□ -0.97
UBR4-206ENST00000419533 TTC4O95801 387 aa9□□□□□ -0.97
UBR4-206ENST00000419533 CHEK2O96017 543 aa9□□□□□ -0.97
UBR4-206ENST00000419533 CASP7P55210 303 aa9□□□□□ -0.97
UBR4-206ENST00000419533 TMED2Q15363 201 aa9□□□□□ -0.97
UBR4-206ENST00000419533 SPATA2LQ8IUW3 424 aaPredicted RBP9□□□□□ -0.97
UBR4-206ENST00000419533 RNF10Q8N5U6 811 aaKnown RBP9□□□□□ -0.97
UBR4-206ENST00000419533 SCFD2Q8WU76 684 aa9□□□□□ -0.97
UBR4-206ENST00000419533 LRGUKQ96M69 825 aa9□□□□□ -0.97
UBR4-206ENST00000419533 MYCBPQ99417 103 aaPredicted RBP9□□□□□ -0.97
UBR4-206ENST00000419533 CAPS2Q9BXY5 557 aa9□□□□□ -0.97
UBR4-206ENST00000419533 VCX3AQ9NNX9 186 aa9□□□□□ -0.97
UBR4-206ENST00000419533 SYNGAP1Q96PV0 1343 aa9□□□□□ -0.97
UBR4-206ENST00000419533 A0A087WWV3 80 aa9□□□□□ -0.97
UBR4-206ENST00000419533 IQANK1A0A1B0GTG1 560 aa9□□□□□ -0.97
UBR4-206ENST00000419533 ZRANB2O95218 330 aaKnown RBP eCLIP9□□□□□ -0.97
UBR4-206ENST00000419533 PSMC1P62191 440 aaKnown RBP9□□□□□ -0.97
UBR4-206ENST00000419533 PASD1Q8IV76 773 aa9□□□□□ -0.97
UBR4-206ENST00000419533 SMARCA1P28370 1054 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 RGS2P41220 211 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 TAP1Q03518 808 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 PPATQ06203 517 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 DGKDQ16760 1214 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms