RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 COASYQ13057 564 aa11.91□□□□□ -0.5
PTCH1-205ENST00000418258 FSCBQ5H9T9 825 aa11.91□□□□□ -0.5
PTCH1-205ENST00000418258 LRRC37BQ96QE4 947 aa11.91□□□□□ -0.5
PTCH1-205ENST00000418258 DIS3Q9Y2L1 958 aaKnown RBP11.91□□□□□ -0.5
PTCH1-205ENST00000418258 BAZ2BQ9UIF8 2168 aaKnown RBP11.91□□□□□ -0.5
PTCH1-205ENST00000418258 CCDC151A5D8V7 595 aa11.9□□□□□ -0.5
PTCH1-205ENST00000418258 KRT38O76015 456 aa11.9□□□□□ -0.5
PTCH1-205ENST00000418258 YWHABP31946 246 aaKnown RBP11.9□□□□□ -0.5
PTCH1-205ENST00000418258 NT5C2P49902 561 aa11.9□□□□□ -0.5
PTCH1-205ENST00000418258 GPS1Q13098 491 aa11.9□□□□□ -0.5
PTCH1-205ENST00000418258 ITPRIPL1Q6GPH6 555 aa11.9□□□□□ -0.5
PTCH1-205ENST00000418258 RNF149Q8NC42 400 aa11.9□□□□□ -0.5
PTCH1-205ENST00000418258 GJD4Q96KN9 370 aaPredicted RBP11.9□□□□□ -0.5
PTCH1-205ENST00000418258 SLC13A1Q9BZW2 595 aa11.9□□□□□ -0.5
PTCH1-205ENST00000418258 PREX2Q70Z35 1606 aa11.9□□□□□ -0.5
PTCH1-205ENST00000418258 SYTL3Q4VX76 610 aa11.9□□□□□ -0.5
PTCH1-205ENST00000418258 RESP18Q5W5W9 173 aa11.9□□□□□ -0.5
PTCH1-205ENST00000418258 CCNYL1Q8N7R7 359 aa11.9□□□□□ -0.5
PTCH1-205ENST00000418258 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.9□□□□□ -0.5
PTCH1-205ENST00000418258 MUC3BQ9H195 1237 aa11.9□□□□□ -0.5
PTCH1-205ENST00000418258 SEL1LQ9UBV2 794 aa11.9□□□□□ -0.5
PTCH1-205ENST00000418258 RASA4BC9J798 803 aa11.9□□□□□ -0.5
PTCH1-205ENST00000418258 RASA4O43374 803 aa11.9□□□□□ -0.5
PTCH1-205ENST00000418258 DDX5P17844 614 aaKnown RBP11.9□□□□□ -0.5
PTCH1-205ENST00000418258 HLA-DPA1P20036 260 aa11.9□□□□□ -0.5
PTCH1-205ENST00000418258 PEX19P40855 299 aa11.9□□□□□ -0.5
PTCH1-205ENST00000418258 TMEM62Q0P6H9 643 aa11.9□□□□□ -0.5
PTCH1-205ENST00000418258 GRAMD1BQ3KR37 738 aa11.9□□□□□ -0.5
PTCH1-205ENST00000418258 ENOX1Q8TC92 643 aaKnown RBP11.9□□□□□ -0.5
PTCH1-205ENST00000418258 PANX2Q96RD6 677 aa11.9□□□□□ -0.5
PTCH1-205ENST00000418258 C11orf70Q9BRQ4 267 aa11.9□□□□□ -0.5
PTCH1-205ENST00000418258 HACL1Q9UJ83 578 aa11.9□□□□□ -0.5
PTCH1-205ENST00000418258 FBXL5Q9UKA1 691 aa11.9□□□□□ -0.5
PTCH1-205ENST00000418258 SEC31AO94979 1220 aaKnown RBP11.9□□□□□ -0.5
PTCH1-205ENST00000418258 ARIH2O95376 493 aa11.9□□□□□ -0.5
PTCH1-205ENST00000418258 PPP1R18Q6NYC8 613 aa11.9□□□□□ -0.5
PTCH1-205ENST00000418258 TTC39CQ8N584 583 aa11.9□□□□□ -0.5
PTCH1-205ENST00000418258 TBC1D19Q8N5T2 526 aa11.9□□□□□ -0.5
PTCH1-205ENST00000418258 TNIP3Q96KP6 325 aa11.9□□□□□ -0.5
PTCH1-205ENST00000418258 ING2Q9H160 280 aa11.9□□□□□ -0.5
PTCH1-205ENST00000418258 HSD17B4P51659 736 aa11.9□□□□□ -0.5
PTCH1-205ENST00000418258 BLVRAP53004 296 aa11.9□□□□□ -0.5
PTCH1-205ENST00000418258 NNTQ13423 1086 aa11.9□□□□□ -0.5
PTCH1-205ENST00000418258 DDIASQ8IXT1 998 aa11.9□□□□□ -0.5
PTCH1-205ENST00000418258 CELF1Q92879 486 aaKnown RBP11.9□□□□□ -0.5
PTCH1-205ENST00000418258 RNF25Q96BH1 459 aaPredicted RBP11.9□□□□□ -0.5
PTCH1-205ENST00000418258 CHCHD3Q9NX63 227 aaKnown RBP11.9□□□□□ -0.5
PTCH1-205ENST00000418258 ADGRL3Q9HAR2 1447 aa11.9□□□□□ -0.5
PTCH1-205ENST00000418258 DIAPH2O60879 1101 aa11.9□□□□□ -0.51
PTCH1-205ENST00000418258 IER5Q5VY09 327 aa11.9□□□□□ -0.51
PTCH1-205ENST00000418258 ZNF564Q8TBZ8 553 aaPredicted RBP11.9□□□□□ -0.51
PTCH1-205ENST00000418258 SEPT8Q92599 483 aa11.9□□□□□ -0.51
PTCH1-205ENST00000418258 ATXN7L3BQ96GX2 97 aa11.9□□□□□ -0.51
PTCH1-205ENST00000418258 MXD3Q9BW11 206 aa11.9□□□□□ -0.51
PTCH1-205ENST00000418258 CEP72Q9P209 647 aa11.9□□□□□ -0.51
PTCH1-205ENST00000418258 PPARGC1AQ9UBK2 798 aaKnown RBP11.9□□□□□ -0.51
PTCH1-205ENST00000418258 PCDHGB4Q9UN71 923 aa11.9□□□□□ -0.51
PTCH1-205ENST00000418258 EFCAB14O75071 495 aa11.89□□□□□ -0.51
PTCH1-205ENST00000418258 TFRCP02786 760 aaKnown RBP11.89□□□□□ -0.51
PTCH1-205ENST00000418258 AARSP49588 968 aaKnown RBP eCLIP11.89□□□□□ -0.51
PTCH1-205ENST00000418258 GLYCTKQ8IVS8 523 aa11.89□□□□□ -0.51
PTCH1-205ENST00000418258 MICALL2Q8IY33 904 aa11.89□□□□□ -0.51
PTCH1-205ENST00000418258 OTUB1Q96FW1 271 aaPredicted RBP11.89□□□□□ -0.51
PTCH1-205ENST00000418258 NFU1Q9UMS0 254 aa11.89□□□□□ -0.51
PTCH1-205ENST00000418258 EFTUD2Q15029 972 aaKnown RBP eCLIP11.89□□□□□ -0.51
PTCH1-205ENST00000418258 ADCK2Q7Z695 626 aa11.89□□□□□ -0.51
PTCH1-205ENST00000418258 GPD1LQ8N335 351 aa11.89□□□□□ -0.51
PTCH1-205ENST00000418258 ENAHQ8N8S7 591 aaPredicted RBP11.89□□□□□ -0.51
PTCH1-205ENST00000418258 CALR3Q96L12 384 aaKnown RBP11.89□□□□□ -0.51
PTCH1-205ENST00000418258 RRAGDQ9NQL2 400 aaPredicted RBP11.89□□□□□ -0.51
PTCH1-205ENST00000418258 RARBP10826 455 aa11.89□□□□□ -0.51
PTCH1-205ENST00000418258 ZFXP17010 805 aaPredicted RBP11.89□□□□□ -0.51
PTCH1-205ENST00000418258 FLOT2Q14254 428 aa11.89□□□□□ -0.51
PTCH1-205ENST00000418258 PGBD4Q96DM1 585 aa11.89□□□□□ -0.51
PTCH1-205ENST00000418258 MTBPQ96DY7 904 aa11.89□□□□□ -0.51
PTCH1-205ENST00000418258 CEP152O94986 1710 aa11.89□□□□□ -0.51
PTCH1-205ENST00000418258 NAF1Q96HR8 494 aaKnown RBP11.89□□□□□ -0.51
PTCH1-205ENST00000418258 STX18Q9P2W9 335 aaKnown RBP11.89□□□□□ -0.51
PTCH1-205ENST00000418258 CDK12Q9NYV4 1490 aaPredicted RBP11.89□□□□□ -0.51
PTCH1-205ENST00000418258 E9PMD0 336 aa11.89□□□□□ -0.51
PTCH1-205ENST00000418258 APOL1O14791 398 aa11.89□□□□□ -0.51
PTCH1-205ENST00000418258 GFPT1Q06210 699 aaPredicted RBP11.89□□□□□ -0.51
PTCH1-205ENST00000418258 R3HDM1Q15032 1099 aaKnown RBP11.89□□□□□ -0.51
PTCH1-205ENST00000418258 APPL2Q8NEU8 664 aa11.89□□□□□ -0.51
PTCH1-205ENST00000418258 FOPNLQ96NB1 174 aa11.89□□□□□ -0.51
PTCH1-205ENST00000418258 SEPT5Q99719 369 aaPredicted RBP11.89□□□□□ -0.51
PTCH1-205ENST00000418258 PITPNM3Q9BZ71 974 aa11.89□□□□□ -0.51
PTCH1-205ENST00000418258 SH3BP1Q9Y3L3 701 aa11.89□□□□□ -0.51
PTCH1-205ENST00000418258 TPI1P60174 286 aa11.89□□□□□ -0.51
PTCH1-205ENST00000418258 SLFNL1Q499Z3 407 aa11.89□□□□□ -0.51
PTCH1-205ENST00000418258 FASTKD1Q53R41 847 aaKnown RBP11.89□□□□□ -0.51
PTCH1-205ENST00000418258 PATL1Q86TB9 770 aaKnown RBP11.89□□□□□ -0.51
PTCH1-205ENST00000418258 KIFC3Q9BVG8 833 aa11.89□□□□□ -0.51
PTCH1-205ENST00000418258 PARVAQ9NVD7 372 aa11.89□□□□□ -0.51
PTCH1-205ENST00000418258 SPATA31A3Q5VYP0 1347 aa11.89□□□□□ -0.51
PTCH1-205ENST00000418258 HMBSP08397 361 aa11.88□□□□□ -0.51
PTCH1-205ENST00000418258 AKT1P31749 480 aa11.88□□□□□ -0.51
PTCH1-205ENST00000418258 SPDYAQ5MJ70 313 aa11.88□□□□□ -0.51
PTCH1-205ENST00000418258 ALS2CLQ60I27 953 aa11.88□□□□□ -0.51
PTCH1-205ENST00000418258 TBC1D1Q86TI0 1168 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms