RNA–Protein interactions for RNA: ENST00000417389.1

TM9SF4-203, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-203ENST00000417389 ATF7IP2Q5U623 682 aa12.17□□□□□ -0.46
TM9SF4-203ENST00000417389 ATL3Q6DD88 541 aa12.17□□□□□ -0.46
TM9SF4-203ENST00000417389 KCNT2Q6UVM3 1135 aa12.17□□□□□ -0.46
TM9SF4-203ENST00000417389 PPP4R3CPQ6ZMV5 832 aa12.17□□□□□ -0.46
TM9SF4-203ENST00000417389 SV2BQ7L1I2 683 aa12.17□□□□□ -0.46
TM9SF4-203ENST00000417389 DYMQ7RTS9 669 aa12.17□□□□□ -0.46
TM9SF4-203ENST00000417389 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.17□□□□□ -0.46
TM9SF4-203ENST00000417389 DAW1Q8N136 415 aa12.17□□□□□ -0.46
TM9SF4-203ENST00000417389 RPS6KC1Q96S38 1066 aa12.17□□□□□ -0.46
TM9SF4-203ENST00000417389 REEP2Q9BRK0 252 aa12.17□□□□□ -0.46
TM9SF4-203ENST00000417389 MRPL4Q9BYD3 311 aaKnown RBP12.17□□□□□ -0.46
TM9SF4-203ENST00000417389 NXF3Q9H4D5 531 aaKnown RBP12.17□□□□□ -0.46
TM9SF4-203ENST00000417389 RNF19AQ9NV58 838 aa12.17□□□□□ -0.46
TM9SF4-203ENST00000417389 LARSQ9P2J5 1176 aaKnown RBP12.17□□□□□ -0.46
TM9SF4-203ENST00000417389 STK17AQ9UEE5 414 aa12.17□□□□□ -0.46
TM9SF4-203ENST00000417389 PUF60Q9UHX1 559 aaKnown RBP12.17□□□□□ -0.46
TM9SF4-203ENST00000417389 PLAGL2Q9UPG8 496 aa12.17□□□□□ -0.46
TM9SF4-203ENST00000417389 ATP6V1DQ9Y5K8 247 aa12.17□□□□□ -0.46
TM9SF4-203ENST00000417389 COL4A4P53420 1690 aaPredicted RBP12.16□□□□□ -0.46
TM9SF4-203ENST00000417389 COL4A6Q14031 1691 aa12.16□□□□□ -0.46
TM9SF4-203ENST00000417389 PHLPP2Q6ZVD8 1323 aa12.16□□□□□ -0.46
TM9SF4-203ENST00000417389 A0A1B0GUA9 196 aa12.16□□□□□ -0.46
TM9SF4-203ENST00000417389 NT5C1B-RDH14C9J2C7 533 aa12.16□□□□□ -0.46
TM9SF4-203ENST00000417389 C5orf67F2Z3F1 127 aa12.16□□□□□ -0.46
TM9SF4-203ENST00000417389 H0YCG3 227 aa12.16□□□□□ -0.46
TM9SF4-203ENST00000417389 K7ENM7 598 aa12.16□□□□□ -0.46
TM9SF4-203ENST00000417389 CUTAO60888 179 aa12.16□□□□□ -0.46
TM9SF4-203ENST00000417389 OFD1O75665 1012 aa12.16□□□□□ -0.46
TM9SF4-203ENST00000417389 FGF18O76093 207 aa12.16□□□□□ -0.46
TM9SF4-203ENST00000417389 ITGB1P05556 798 aa12.16□□□□□ -0.46
TM9SF4-203ENST00000417389 HARSP12081 509 aaKnown RBP12.16□□□□□ -0.46
TM9SF4-203ENST00000417389 PPM1AP35813 382 aa12.16□□□□□ -0.46
TM9SF4-203ENST00000417389 MLH1P40692 756 aa12.16□□□□□ -0.46
TM9SF4-203ENST00000417389 KRT85P78386 507 aa12.16□□□□□ -0.46
TM9SF4-203ENST00000417389 MAPK7Q13164 816 aa12.16□□□□□ -0.46
TM9SF4-203ENST00000417389 FAM187BQ17R55 369 aa12.16□□□□□ -0.46
TM9SF4-203ENST00000417389 AGMOQ6ZNB7 445 aa12.16□□□□□ -0.46
TM9SF4-203ENST00000417389 LRRC55Q6ZSA7 311 aa12.16□□□□□ -0.46
TM9SF4-203ENST00000417389 MRPL10Q7Z7H8 261 aaKnown RBP12.16□□□□□ -0.46
TM9SF4-203ENST00000417389 ZBTB33Q86T24 672 aa12.16□□□□□ -0.46
TM9SF4-203ENST00000417389 TMEM87AQ8NBN3 555 aa12.16□□□□□ -0.46
TM9SF4-203ENST00000417389 SMG8Q8ND04 991 aaKnown RBP12.16□□□□□ -0.46
TM9SF4-203ENST00000417389 POF1BQ8WVV4 589 aa12.16□□□□□ -0.46
TM9SF4-203ENST00000417389 RSPH1Q8WYR4 309 aa12.16□□□□□ -0.46
TM9SF4-203ENST00000417389 P2RX5Q93086 422 aa12.16□□□□□ -0.46
TM9SF4-203ENST00000417389 PPP2R3CQ969Q6 453 aa12.16□□□□□ -0.46
TM9SF4-203ENST00000417389 GAD1Q99259 594 aa12.16□□□□□ -0.46
TM9SF4-203ENST00000417389 LMAN2LQ9H0V9 348 aa12.16□□□□□ -0.46
TM9SF4-203ENST00000417389 RNF39Q9H2S5 420 aa12.16□□□□□ -0.46
TM9SF4-203ENST00000417389 PDZD7Q9H5P4 517 aa12.16□□□□□ -0.46
TM9SF4-203ENST00000417389 NSUN3Q9H649 340 aaKnown RBP12.16□□□□□ -0.46
TM9SF4-203ENST00000417389 IGFLR1Q9H665 355 aa12.16□□□□□ -0.46
TM9SF4-203ENST00000417389 CWH43Q9H720 699 aa12.16□□□□□ -0.46
TM9SF4-203ENST00000417389 PARVGQ9HBI0 331 aa12.16□□□□□ -0.46
TM9SF4-203ENST00000417389 PRDM6Q9NQX0 595 aa12.16□□□□□ -0.46
TM9SF4-203ENST00000417389 ENTPD7Q9NQZ7 604 aa12.16□□□□□ -0.46
TM9SF4-203ENST00000417389 BLOC1S4Q9NUP1 217 aa12.16□□□□□ -0.46
TM9SF4-203ENST00000417389 TBC1D13Q9NVG8 400 aa12.16□□□□□ -0.46
TM9SF4-203ENST00000417389 FAM13BQ9NYF5 915 aa12.16□□□□□ -0.46
TM9SF4-203ENST00000417389 SPG21Q9NZD8 308 aa12.16□□□□□ -0.46
TM9SF4-203ENST00000417389 KLK14Q9P0G3 267 aa12.16□□□□□ -0.46
TM9SF4-203ENST00000417389 KANSL3Q9P2N6 904 aa12.16□□□□□ -0.46
TM9SF4-203ENST00000417389 ANKFY1Q9P2R3 1169 aa12.16□□□□□ -0.46
TM9SF4-203ENST00000417389 ODF2LQ9ULJ1 636 aa12.16□□□□□ -0.46
TM9SF4-203ENST00000417389 GDAQ9Y2T3 454 aa12.16□□□□□ -0.46
TM9SF4-203ENST00000417389 PRRC2BQ5JSZ5 2229 aaKnown RBP12.16□□□□□ -0.46
TM9SF4-203ENST00000417389 CHD7Q9P2D1 2997 aa12.16□□□□□ -0.46
TM9SF4-203ENST00000417389 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.15□□□□□ -0.46
TM9SF4-203ENST00000417389 ARL5CA6NH57 179 aa12.15□□□□□ -0.46
TM9SF4-203ENST00000417389 TTLL13PA6NNM8 815 aa12.15□□□□□ -0.46
TM9SF4-203ENST00000417389 TULP1O00294 542 aaPredicted RBP12.15□□□□□ -0.46
TM9SF4-203ENST00000417389 NR1I2O75469 434 aa12.15□□□□□ -0.46
TM9SF4-203ENST00000417389 BRD1O95696 1058 aa12.15□□□□□ -0.46
TM9SF4-203ENST00000417389 IDEP14735 1019 aa12.15□□□□□ -0.46
TM9SF4-203ENST00000417389 POU3F3P20264 500 aaPredicted RBP12.15□□□□□ -0.46
TM9SF4-203ENST00000417389 SCNN1GP51170 649 aa12.15□□□□□ -0.46
TM9SF4-203ENST00000417389 BCAR1P56945 870 aa12.15□□□□□ -0.46
TM9SF4-203ENST00000417389 DCAF4L1Q3SXM0 396 aa12.15□□□□□ -0.46
TM9SF4-203ENST00000417389 ZNF568Q3ZCX4 644 aa12.15□□□□□ -0.46
TM9SF4-203ENST00000417389 ARSHQ5FYA8 562 aa12.15□□□□□ -0.46
TM9SF4-203ENST00000417389 FAM178BQ8IXR5 827 aa12.15□□□□□ -0.46
TM9SF4-203ENST00000417389 LRRC15Q8TF66 581 aa12.15□□□□□ -0.46
TM9SF4-203ENST00000417389 SPIRE2Q8WWL2 714 aa12.15□□□□□ -0.46
TM9SF4-203ENST00000417389 DHX58Q96C10 678 aa12.15□□□□□ -0.46
TM9SF4-203ENST00000417389 TMEM169Q96HH4 297 aa12.15□□□□□ -0.46
TM9SF4-203ENST00000417389 SPATA32Q96LK8 384 aa12.15□□□□□ -0.46
TM9SF4-203ENST00000417389 CCDC113Q9H0I3 377 aa12.15□□□□□ -0.46
TM9SF4-203ENST00000417389 SNTG2Q9NY99 539 aa12.15□□□□□ -0.46
TM9SF4-203ENST00000417389 THEGQ9P2T0 379 aa12.15□□□□□ -0.46
TM9SF4-203ENST00000417389 GIT1Q9Y2X7 761 aa12.15□□□□□ -0.46
TM9SF4-203ENST00000417389 NLRC5Q86WI3 1866 aa12.14□□□□□ -0.47
TM9SF4-203ENST00000417389 TRAK2O60296 914 aa12.14□□□□□ -0.47
TM9SF4-203ENST00000417389 LINC00271P0C7V0 271 aa12.14□□□□□ -0.47
TM9SF4-203ENST00000417389 OR1G1P47890 313 aa12.14□□□□□ -0.47
TM9SF4-203ENST00000417389 YARSP54577 528 aaKnown RBP12.14□□□□□ -0.47
TM9SF4-203ENST00000417389 OSTNP61366 133 aa12.14□□□□□ -0.47
TM9SF4-203ENST00000417389 GIT2Q14161 759 aa12.14□□□□□ -0.47
TM9SF4-203ENST00000417389 BMS1Q14692 1282 aaKnown RBP12.14□□□□□ -0.47
TM9SF4-203ENST00000417389 TCEAL5Q5H9L2 206 aa12.14□□□□□ -0.47
TM9SF4-203ENST00000417389 NT5DC1Q5TFE4 455 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms