RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 BCL6BQ8N143 479 aaPredicted RBP3.59□□□□□ -1.83
LINC00428-201ENST00000415620 CELF2-AS1Q8N7Q2 184 aa3.59□□□□□ -1.83
LINC00428-201ENST00000415620 OR14K1Q8NGZ2 314 aa3.59□□□□□ -1.83
LINC00428-201ENST00000415620 WDR48Q8TAF3 677 aa3.59□□□□□ -1.83
LINC00428-201ENST00000415620 PMFBP1Q8TBY8 1022 aa3.59□□□□□ -1.83
LINC00428-201ENST00000415620 NTN5Q8WTR8 489 aaPredicted RBP3.59□□□□□ -1.83
LINC00428-201ENST00000415620 RABGGTAQ92696 567 aa3.59□□□□□ -1.83
LINC00428-201ENST00000415620 MIEF2Q96C03 454 aa3.59□□□□□ -1.83
LINC00428-201ENST00000415620 ALG1Q9BT22 464 aa3.59□□□□□ -1.83
LINC00428-201ENST00000415620 OR10A5Q9H207 317 aa3.59□□□□□ -1.83
LINC00428-201ENST00000415620 ZNF408Q9H9D4 720 aa3.59□□□□□ -1.83
LINC00428-201ENST00000415620 USP35Q9P2H5 1018 aa3.59□□□□□ -1.83
LINC00428-201ENST00000415620 FAM184BQ9ULE4 1060 aa3.59□□□□□ -1.83
LINC00428-201ENST00000415620 SH3BP1Q9Y3L3 701 aa3.59□□□□□ -1.83
LINC00428-201ENST00000415620 CTDP1Q9Y5B0 961 aaPredicted RBP3.59□□□□□ -1.83
LINC00428-201ENST00000415620 METP08581 1390 aa3.59□□□□□ -1.83
LINC00428-201ENST00000415620 OVOS2A0A0G2JMS6 1433 aa3.59□□□□□ -1.84
LINC00428-201ENST00000415620 OVOS2A0A0J9YW53 1432 aa3.59□□□□□ -1.84
LINC00428-201ENST00000415620 OVOS2Q6IE36 1432 aa3.59□□□□□ -1.84
LINC00428-201ENST00000415620 CCDC141Q6ZP82 1450 aa3.59□□□□□ -1.84
LINC00428-201ENST00000415620 NHSQ6T4R5 1651 aa3.59□□□□□ -1.84
LINC00428-201ENST00000415620 ALS2Q96Q42 1657 aa3.59□□□□□ -1.84
LINC00428-201ENST00000415620 TRPM3Q9HCF6 1732 aaPredicted RBP3.58□□□□□ -1.84
LINC00428-201ENST00000415620 BRCA1P38398 1863 aaKnown RBP3.58□□□□□ -1.84
LINC00428-201ENST00000415620 MUC3AQ02505 3323 aa3.58□□□□□ -1.84
LINC00428-201ENST00000415620 INO80B-WBP1J3KQ70 363 aa3.58□□□□□ -1.84
LINC00428-201ENST00000415620 CLASP2O75122 1294 aaKnown RBP3.58□□□□□ -1.84
LINC00428-201ENST00000415620 FGRP09769 529 aa3.58□□□□□ -1.84
LINC00428-201ENST00000415620 ZNF37AP17032 561 aaPredicted RBP3.58□□□□□ -1.84
LINC00428-201ENST00000415620 MAN2A2P49641 1150 aa3.58□□□□□ -1.84
LINC00428-201ENST00000415620 SCNN1GP51170 649 aa3.58□□□□□ -1.84
LINC00428-201ENST00000415620 ST5P78524 1137 aa3.58□□□□□ -1.84
LINC00428-201ENST00000415620 PAK1Q13153 545 aa3.58□□□□□ -1.84
LINC00428-201ENST00000415620 TOB2Q14106 344 aaPredicted RBP3.58□□□□□ -1.84
LINC00428-201ENST00000415620 SAFB2Q14151 953 aaKnown RBP eCLIP3.58□□□□□ -1.84
LINC00428-201ENST00000415620 COLEC12Q5KU26 742 aa3.58□□□□□ -1.84
LINC00428-201ENST00000415620 TMCO4Q5TGY1 634 aa3.58□□□□□ -1.84
LINC00428-201ENST00000415620 LRSAM1Q6UWE0 723 aa3.58□□□□□ -1.84
LINC00428-201ENST00000415620 Q6ZRM9 215 aa3.58□□□□□ -1.84
LINC00428-201ENST00000415620 GAREM2Q75VX8 874 aa3.58□□□□□ -1.84
LINC00428-201ENST00000415620 SYNE4Q8N205 404 aa3.58□□□□□ -1.84
LINC00428-201ENST00000415620 SLC25A43Q8WUT9 341 aaPredicted RBP3.58□□□□□ -1.84
LINC00428-201ENST00000415620 MRRFQ96E11 262 aaKnown RBP3.58□□□□□ -1.84
LINC00428-201ENST00000415620 BBC3Q96PG8 261 aaPredicted RBP3.58□□□□□ -1.84
LINC00428-201ENST00000415620 INO80BQ9C086 356 aaPredicted RBP3.58□□□□□ -1.84
LINC00428-201ENST00000415620 CAPN10Q9HC96 672 aa3.58□□□□□ -1.84
LINC00428-201ENST00000415620 KIAA1522Q9P206 1035 aaPredicted RBP3.58□□□□□ -1.84
LINC00428-201ENST00000415620 CFDP1Q9UEE9 299 aaPredicted RBP3.58□□□□□ -1.84
LINC00428-201ENST00000415620 TIAM2Q8IVF5 1701 aa3.58□□□□□ -1.84
LINC00428-201ENST00000415620 A0A1W2PRX2 142 aa3.57□□□□□ -1.84
LINC00428-201ENST00000415620 CCDC144AA2RUR9 1427 aa3.57□□□□□ -1.84
LINC00428-201ENST00000415620 IQCA1LA6NCM1 817 aa3.57□□□□□ -1.84
LINC00428-201ENST00000415620 ZNF561-AS1K7EIQ3 104 aa3.57□□□□□ -1.84
LINC00428-201ENST00000415620 ARVCFO00192 962 aa3.57□□□□□ -1.84
LINC00428-201ENST00000415620 ADAM8P78325 824 aa3.57□□□□□ -1.84
LINC00428-201ENST00000415620 IFRD2Q12894 506 aaPredicted RBP3.57□□□□□ -1.84
LINC00428-201ENST00000415620 PTPAQ15257 358 aa3.57□□□□□ -1.84
LINC00428-201ENST00000415620 SEC23AQ15436 765 aa3.57□□□□□ -1.84
LINC00428-201ENST00000415620 ITSN1Q15811 1721 aa3.57□□□□□ -1.84
LINC00428-201ENST00000415620 DDR2Q16832 855 aa3.57□□□□□ -1.84
LINC00428-201ENST00000415620 LY6G5CQ5SRR4 150 aa3.57□□□□□ -1.84
LINC00428-201ENST00000415620 YOD1Q5VVQ6 348 aaPredicted RBP3.57□□□□□ -1.84
LINC00428-201ENST00000415620 GRAMD4Q6IC98 578 aa3.57□□□□□ -1.84
LINC00428-201ENST00000415620 HTR3DQ70Z44 454 aa3.57□□□□□ -1.84
LINC00428-201ENST00000415620 C16orf59Q7L2K0 433 aa3.57□□□□□ -1.84
LINC00428-201ENST00000415620 DPH6Q7L8W6 267 aa3.57□□□□□ -1.84
LINC00428-201ENST00000415620 IQGAP3Q86VI3 1631 aa3.57□□□□□ -1.84
LINC00428-201ENST00000415620 PTRH1Q86Y79 214 aaKnown RBP3.57□□□□□ -1.84
LINC00428-201ENST00000415620 VRK3Q8IV63 474 aa3.57□□□□□ -1.84
LINC00428-201ENST00000415620 IGSF1Q8N6C5 1336 aa3.57□□□□□ -1.84
LINC00428-201ENST00000415620 ST13P5Q8NFI4 369 aaPredicted RBP3.57□□□□□ -1.84
LINC00428-201ENST00000415620 PCDH19Q8TAB3 1148 aa3.57□□□□□ -1.84
LINC00428-201ENST00000415620 LENG9Q96B70 501 aa3.57□□□□□ -1.84
LINC00428-201ENST00000415620 CBLCQ9ULV8 474 aa3.57□□□□□ -1.84
LINC00428-201ENST00000415620 TRAF6Q9Y4K3 522 aa3.57□□□□□ -1.84
LINC00428-201ENST00000415620 ARFGEF1Q9Y6D6 1849 aa3.56□□□□□ -1.84
LINC00428-201ENST00000415620 IFT172Q9UG01 1749 aa3.56□□□□□ -1.84
LINC00428-201ENST00000415620 CCDC18Q5T9S5 1454 aa3.56□□□□□ -1.84
LINC00428-201ENST00000415620 PNPLA7Q6ZV29 1317 aa3.56□□□□□ -1.84
LINC00428-201ENST00000415620 TRAV20A0A0B4J274 112 aa3.56□□□□□ -1.84
LINC00428-201ENST00000415620 AQP7O14520 342 aa3.56□□□□□ -1.84
LINC00428-201ENST00000415620 PPFIA4O75335 1185 aa3.56□□□□□ -1.84
LINC00428-201ENST00000415620 PYGMP11217 842 aa3.56□□□□□ -1.84
LINC00428-201ENST00000415620 PLA2G5P39877 138 aa3.56□□□□□ -1.84
LINC00428-201ENST00000415620 STAT5BP51692 787 aa3.56□□□□□ -1.84
LINC00428-201ENST00000415620 ADCY7P51828 1080 aa3.56□□□□□ -1.84
LINC00428-201ENST00000415620 MFAP1P55081 439 aaKnown RBP3.56□□□□□ -1.84
LINC00428-201ENST00000415620 JAM2P57087 298 aa3.56□□□□□ -1.84
LINC00428-201ENST00000415620 LACTBP83111 547 aaPredicted RBP3.56□□□□□ -1.84
LINC00428-201ENST00000415620 OSTM1Q86WC4 334 aa3.56□□□□□ -1.84
LINC00428-201ENST00000415620 VPS37DQ86XT2 251 aa3.56□□□□□ -1.84
LINC00428-201ENST00000415620 LPPQ93052 612 aa3.56□□□□□ -1.84
LINC00428-201ENST00000415620 FBXW5Q969U6 566 aa3.56□□□□□ -1.84
LINC00428-201ENST00000415620 SMURF1Q9HCE7 757 aa3.56□□□□□ -1.84
LINC00428-201ENST00000415620 UCKL1Q9NWZ5 548 aa3.56□□□□□ -1.84
LINC00428-201ENST00000415620 VWA7Q9Y334 891 aa3.56□□□□□ -1.84
LINC00428-201ENST00000415620 CCDC88AQ3V6T2 1871 aa3.56□□□□□ -1.84
LINC00428-201ENST00000415620 USP54Q70EL1 1684 aa3.55□□□□□ -1.84
LINC00428-201ENST00000415620 TRPM1Q7Z4N2 1603 aa3.55□□□□□ -1.84
LINC00428-201ENST00000415620 HFM1A2PYH4 1435 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms