RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 KCNQ1P51787 676 aa10.66□□□□□ -0.7
LINC01090-201ENST00000415357 PTPROQ16827 1216 aa10.66□□□□□ -0.7
LINC01090-201ENST00000415357 TIGD5Q53EQ6 642 aa10.66□□□□□ -0.7
LINC01090-201ENST00000415357 RILPL1Q5EBL4 403 aa10.66□□□□□ -0.7
LINC01090-201ENST00000415357 TCEAL5Q5H9L2 206 aa10.66□□□□□ -0.7
LINC01090-201ENST00000415357 HAUS3Q68CZ6 603 aa10.66□□□□□ -0.7
LINC01090-201ENST00000415357 LRRC55Q6ZSA7 311 aa10.66□□□□□ -0.7
LINC01090-201ENST00000415357 IGSF22Q8N9C0 903 aa10.66□□□□□ -0.7
LINC01090-201ENST00000415357 KLHL23Q8NBE8 558 aa10.66□□□□□ -0.7
LINC01090-201ENST00000415357 SNX29Q8TEQ0 813 aa10.66□□□□□ -0.7
LINC01090-201ENST00000415357 NACC1Q96RE7 527 aa10.66□□□□□ -0.7
LINC01090-201ENST00000415357 TMEM117Q9H0C3 514 aa10.66□□□□□ -0.7
LINC01090-201ENST00000415357 CWH43Q9H720 699 aa10.66□□□□□ -0.7
LINC01090-201ENST00000415357 POLD4Q9HCU8 107 aa10.66□□□□□ -0.7
LINC01090-201ENST00000415357 FAM105AQ9NUU6 356 aa10.66□□□□□ -0.7
LINC01090-201ENST00000415357 DACT1Q9NYF0 836 aa10.66□□□□□ -0.7
LINC01090-201ENST00000415357 PLAGL2Q9UPG8 496 aa10.66□□□□□ -0.7
LINC01090-201ENST00000415357 FCF1Q9Y324 198 aaKnown RBP10.66□□□□□ -0.7
LINC01090-201ENST00000415357 PCDHGC5Q9Y5F6 944 aa10.66□□□□□ -0.7
LINC01090-201ENST00000415357 PLXNA4Q9HCM2 1894 aa10.66□□□□□ -0.7
LINC01090-201ENST00000415357 INO80B-WBP1J3KQ70 363 aa10.65□□□□□ -0.7
LINC01090-201ENST00000415357 ASAP2O43150 1006 aa10.65□□□□□ -0.7
LINC01090-201ENST00000415357 DXOO77932 396 aaKnown RBP10.65□□□□□ -0.7
LINC01090-201ENST00000415357 XRCC6P12956 609 aaKnown RBP eCLIP10.65□□□□□ -0.7
LINC01090-201ENST00000415357 HOXA11P31270 313 aaPredicted RBP10.65□□□□□ -0.7
LINC01090-201ENST00000415357 IRS1P35568 1242 aa10.65□□□□□ -0.7
LINC01090-201ENST00000415357 MMP16P51512 607 aa10.65□□□□□ -0.7
LINC01090-201ENST00000415357 PTENP60484 403 aa10.65□□□□□ -0.7
LINC01090-201ENST00000415357 MRPS5P82675 430 aaKnown RBP10.65□□□□□ -0.7
LINC01090-201ENST00000415357 ATP2C1P98194 919 aaPredicted RBP10.65□□□□□ -0.7
LINC01090-201ENST00000415357 MBTD1Q05BQ5 628 aa10.65□□□□□ -0.7
LINC01090-201ENST00000415357 CAMK1Q14012 370 aa10.65□□□□□ -0.7
LINC01090-201ENST00000415357 MXD4Q14582 209 aaPredicted RBP10.65□□□□□ -0.7
LINC01090-201ENST00000415357 UBXN11Q5T124 520 aa10.65□□□□□ -0.7
LINC01090-201ENST00000415357 DTHD1Q6ZMT9 781 aa10.65□□□□□ -0.7
LINC01090-201ENST00000415357 FAM43BQ6ZT52 329 aaPredicted RBP10.65□□□□□ -0.7
LINC01090-201ENST00000415357 SRGAP1Q7Z6B7 1085 aa10.65□□□□□ -0.7
LINC01090-201ENST00000415357 ABI1Q8IZP0 508 aa10.65□□□□□ -0.7
LINC01090-201ENST00000415357 COLGALT1Q8NBJ5 622 aa10.65□□□□□ -0.7
LINC01090-201ENST00000415357 SPPL3Q8TCT6 385 aa10.65□□□□□ -0.7
LINC01090-201ENST00000415357 POF1BQ8WVV4 589 aa10.65□□□□□ -0.7
LINC01090-201ENST00000415357 ATXN2LQ8WWM7 1075 aaKnown RBP10.65□□□□□ -0.7
LINC01090-201ENST00000415357 BSNDQ8WZ55 320 aa10.65□□□□□ -0.7
LINC01090-201ENST00000415357 CPB2Q96IY4 423 aa10.65□□□□□ -0.7
LINC01090-201ENST00000415357 ASB2Q96Q27 587 aa10.65□□□□□ -0.7
LINC01090-201ENST00000415357 MMTAG2Q9BU76 263 aaKnown RBP10.65□□□□□ -0.7
LINC01090-201ENST00000415357 PLVAPQ9BX97 442 aa10.65□□□□□ -0.7
LINC01090-201ENST00000415357 NSUN3Q9H649 340 aaKnown RBP10.65□□□□□ -0.7
LINC01090-201ENST00000415357 CHST12Q9NRB3 414 aa10.65□□□□□ -0.7
LINC01090-201ENST00000415357 DDX19AQ9NUU7 478 aaKnown RBP10.65□□□□□ -0.7
LINC01090-201ENST00000415357 DBR1Q9UK59 544 aaKnown RBP10.65□□□□□ -0.7
LINC01090-201ENST00000415357 KIAA1024Q9UPX6 916 aa10.65□□□□□ -0.7
LINC01090-201ENST00000415357 VWA3AA6NCI4 1184 aa10.64□□□□□ -0.71
LINC01090-201ENST00000415357 LRRIQ4A6NIV6 560 aa10.64□□□□□ -0.71
LINC01090-201ENST00000415357 E9PMD0 336 aa10.64□□□□□ -0.71
LINC01090-201ENST00000415357 B4GALT5O43286 388 aa10.64□□□□□ -0.71
LINC01090-201ENST00000415357 TSPAN1O60635 241 aa10.64□□□□□ -0.71
LINC01090-201ENST00000415357 ERLIN2O94905 339 aa10.64□□□□□ -0.71
LINC01090-201ENST00000415357 EOMESO95936 686 aa10.64□□□□□ -0.71
LINC01090-201ENST00000415357 GTF2F1P35269 517 aaKnown RBP eCLIP10.64□□□□□ -0.71
LINC01090-201ENST00000415357 PRPHP41219 470 aa10.64□□□□□ -0.71
LINC01090-201ENST00000415357 TFDP1Q14186 410 aa10.64□□□□□ -0.71
LINC01090-201ENST00000415357 ZRSR1Q15695 479 aaKnown RBP10.64□□□□□ -0.71
LINC01090-201ENST00000415357 KCNK18Q7Z418 384 aa10.64□□□□□ -0.71
LINC01090-201ENST00000415357 CDR2LQ86X02 465 aaPredicted RBP10.64□□□□□ -0.71
LINC01090-201ENST00000415357 LRRC43Q8N309 656 aa10.64□□□□□ -0.71
LINC01090-201ENST00000415357 MCPH1Q8NEM0 835 aa10.64□□□□□ -0.71
LINC01090-201ENST00000415357 P2RX5Q93086 422 aa10.64□□□□□ -0.71
LINC01090-201ENST00000415357 TRAIPQ9BWF2 469 aa10.64□□□□□ -0.71
LINC01090-201ENST00000415357 EIF2AQ9BY44 585 aaKnown RBP10.64□□□□□ -0.71
LINC01090-201ENST00000415357 RAB34Q9BZG1 259 aa10.64□□□□□ -0.71
LINC01090-201ENST00000415357 LMAN2LQ9H0V9 348 aa10.64□□□□□ -0.71
LINC01090-201ENST00000415357 BHMT2Q9H2M3 363 aa10.64□□□□□ -0.71
LINC01090-201ENST00000415357 UBE2ZQ9H832 354 aaPredicted RBP10.64□□□□□ -0.71
LINC01090-201ENST00000415357 INPP5FQ9Y2H2 1132 aa10.64□□□□□ -0.71
LINC01090-201ENST00000415357 PCDHB2Q9Y5E7 798 aa10.64□□□□□ -0.71
LINC01090-201ENST00000415357 PCDHB12Q9Y5F1 795 aa10.64□□□□□ -0.71
LINC01090-201ENST00000415357 MUC3AQ02505 3323 aa10.64□□□□□ -0.71
LINC01090-201ENST00000415357 K7ELQ4 463 aaPredicted RBP10.63□□□□□ -0.71
LINC01090-201ENST00000415357 LAD1O00515 517 aa10.63□□□□□ -0.71
LINC01090-201ENST00000415357 FGF18O76093 207 aa10.63□□□□□ -0.71
LINC01090-201ENST00000415357 LAG3P18627 525 aa10.63□□□□□ -0.71
LINC01090-201ENST00000415357 CYP11B2P19099 503 aa10.63□□□□□ -0.71
LINC01090-201ENST00000415357 KCNA5P22460 613 aa10.63□□□□□ -0.71
LINC01090-201ENST00000415357 HYAL1Q12794 435 aa10.63□□□□□ -0.71
LINC01090-201ENST00000415357 PDIA5Q14554 519 aa10.63□□□□□ -0.71
LINC01090-201ENST00000415357 KRT79Q5XKE5 535 aa10.63□□□□□ -0.71
LINC01090-201ENST00000415357 FAM173BQ6P4H8 233 aa10.63□□□□□ -0.71
LINC01090-201ENST00000415357 AGMOQ6ZNB7 445 aa10.63□□□□□ -0.71
LINC01090-201ENST00000415357 EP400NLQ6ZTU2 488 aa10.63□□□□□ -0.71
LINC01090-201ENST00000415357 ADGRD2Q7Z7M1 963 aa10.63□□□□□ -0.71
LINC01090-201ENST00000415357 THNSL1Q8IYQ7 743 aa10.63□□□□□ -0.71
LINC01090-201ENST00000415357 NECAB3Q96P71 396 aaPredicted RBP10.63□□□□□ -0.71
LINC01090-201ENST00000415357 PNMA5Q96PV4 448 aa10.63□□□□□ -0.71
LINC01090-201ENST00000415357 PLIN2Q99541 437 aa10.63□□□□□ -0.71
LINC01090-201ENST00000415357 KIFC3Q9BVG8 833 aa10.63□□□□□ -0.71
LINC01090-201ENST00000415357 IGFLR1Q9H665 355 aa10.63□□□□□ -0.71
LINC01090-201ENST00000415357 AAASQ9NRG9 546 aa10.63□□□□□ -0.71
LINC01090-201ENST00000415357 COG5Q9UP83 839 aa10.63□□□□□ -0.71
LINC01090-201ENST00000415357 USP20Q9Y2K6 914 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms