RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 SPZ1Q9BXG8 430 aa5.6□□□□□ -1.51
VPS41-205ENST00000414632 COL25A1Q9BXS0 654 aaPredicted RBP5.6□□□□□ -1.51
VPS41-205ENST00000414632 SENP6Q9GZR1 1112 aaPredicted RBP5.6□□□□□ -1.51
VPS41-205ENST00000414632 KATNBL1Q9H079 304 aa5.6□□□□□ -1.51
VPS41-205ENST00000414632 TMX1Q9H3N1 280 aa5.6□□□□□ -1.51
VPS41-205ENST00000414632 C11orf49Q9H6J7 331 aa5.6□□□□□ -1.51
VPS41-205ENST00000414632 NCOA5Q9HCD5 579 aaKnown RBP5.6□□□□□ -1.51
VPS41-205ENST00000414632 XPNPEP3Q9NQH7 507 aa5.6□□□□□ -1.51
VPS41-205ENST00000414632 NXF1Q9UBU9 619 aaKnown RBP5.6□□□□□ -1.51
VPS41-205ENST00000414632 SEC63Q9UGP8 760 aaKnown RBP5.6□□□□□ -1.51
VPS41-205ENST00000414632 KLHL3Q9UH77 587 aa5.6□□□□□ -1.51
VPS41-205ENST00000414632 MRPL11Q9Y3B7 192 aaKnown RBP5.6□□□□□ -1.51
VPS41-205ENST00000414632 CYP46A1Q9Y6A2 500 aa5.6□□□□□ -1.51
VPS41-205ENST00000414632 LOC100289279A0A1B0GTE1 492 aa5.59□□□□□ -1.51
VPS41-205ENST00000414632 PRAMEF27A3QJZ7 478 aa5.59□□□□□ -1.51
VPS41-205ENST00000414632 ASB14A6NK59 587 aa5.59□□□□□ -1.51
VPS41-205ENST00000414632 DLGAP3O95886 979 aa5.59□□□□□ -1.51
VPS41-205ENST00000414632 C6orf222P0C671 652 aaPredicted RBP5.59□□□□□ -1.51
VPS41-205ENST00000414632 FAM153BP0C7A2 387 aa5.59□□□□□ -1.51
VPS41-205ENST00000414632 MYCLP12524 364 aaPredicted RBP5.59□□□□□ -1.51
VPS41-205ENST00000414632 MASP1P48740 699 aa5.59□□□□□ -1.51
VPS41-205ENST00000414632 GNAQP50148 359 aa5.59□□□□□ -1.51
VPS41-205ENST00000414632 ETF1P62495 437 aaKnown RBP5.59□□□□□ -1.51
VPS41-205ENST00000414632 TNFAIP2Q03169 654 aa5.59□□□□□ -1.51
VPS41-205ENST00000414632 LRRC41Q15345 812 aa5.59□□□□□ -1.51
VPS41-205ENST00000414632 UBE2SQ16763 222 aa5.59□□□□□ -1.51
VPS41-205ENST00000414632 ARHGEF16Q5VV41 709 aa5.59□□□□□ -1.51
VPS41-205ENST00000414632 WWC2Q6AWC2 1192 aa5.59□□□□□ -1.51
VPS41-205ENST00000414632 KIAA1211LQ6NV74 962 aa5.59□□□□□ -1.51
VPS41-205ENST00000414632 TAPT1Q6NXT6 567 aa5.59□□□□□ -1.51
VPS41-205ENST00000414632 USP17L6PQ6QN14 398 aa5.59□□□□□ -1.51
VPS41-205ENST00000414632 C1orf229Q6ZS94 237 aaPredicted RBP5.59□□□□□ -1.51
VPS41-205ENST00000414632 SEPT14Q6ZU15 432 aa5.59□□□□□ -1.51
VPS41-205ENST00000414632 NECAB2Q7Z6G3 386 aa5.59□□□□□ -1.51
VPS41-205ENST00000414632 UBE2Q1Q7Z7E8 422 aa5.59□□□□□ -1.51
VPS41-205ENST00000414632 C7orf61Q8IZ16 206 aa5.59□□□□□ -1.51
VPS41-205ENST00000414632 IL31RAQ8NI17 732 aa5.59□□□□□ -1.51
VPS41-205ENST00000414632 PPP1R13LQ8WUF5 828 aa5.59□□□□□ -1.51
VPS41-205ENST00000414632 COPS5Q92905 334 aa5.59□□□□□ -1.51
VPS41-205ENST00000414632 ACDQ96AP0 544 aa5.59□□□□□ -1.51
VPS41-205ENST00000414632 PGBD1Q96JS3 809 aa5.59□□□□□ -1.51
VPS41-205ENST00000414632 RMDN3Q96TC7 470 aa5.59□□□□□ -1.51
VPS41-205ENST00000414632 MAP3K14Q99558 947 aa5.59□□□□□ -1.51
VPS41-205ENST00000414632 LZTS2Q9BRK4 669 aa5.59□□□□□ -1.51
VPS41-205ENST00000414632 WNT10AQ9GZT5 417 aa5.59□□□□□ -1.51
VPS41-205ENST00000414632 ABHD16BQ9H3Z7 469 aa5.59□□□□□ -1.51
VPS41-205ENST00000414632 PDRG1Q9NUG6 133 aa5.59□□□□□ -1.51
VPS41-205ENST00000414632 RBM28Q9NW13 759 aaKnown RBP5.59□□□□□ -1.51
VPS41-205ENST00000414632 ADD3Q9UEY8 706 aaKnown RBP5.59□□□□□ -1.51
VPS41-205ENST00000414632 ADAM30Q9UKF2 790 aa5.59□□□□□ -1.51
VPS41-205ENST00000414632 FAM184BQ9ULE4 1060 aa5.59□□□□□ -1.51
VPS41-205ENST00000414632 HIF3AQ9Y2N7 669 aa5.59□□□□□ -1.51
VPS41-205ENST00000414632 WDR81Q562E7 1941 aa5.58□□□□□ -1.52
VPS41-205ENST00000414632 KBTBD13C9JR72 458 aa5.58□□□□□ -1.52
VPS41-205ENST00000414632 H3BM21 787 aa5.58□□□□□ -1.52
VPS41-205ENST00000414632 GCOM1H8Y6P7 765 aaPredicted RBP5.58□□□□□ -1.52
VPS41-205ENST00000414632 DNM1LO00429 736 aa5.58□□□□□ -1.52
VPS41-205ENST00000414632 TNFRSF10CO14798 259 aa5.58□□□□□ -1.52
VPS41-205ENST00000414632 ADAMTS3O15072 1205 aa5.58□□□□□ -1.52
VPS41-205ENST00000414632 DYNC1LI2O43237 492 aaPredicted RBP5.58□□□□□ -1.52
VPS41-205ENST00000414632 MSCO60682 206 aa5.58□□□□□ -1.52
VPS41-205ENST00000414632 ADAMTS4O75173 837 aa5.58□□□□□ -1.52
VPS41-205ENST00000414632 ARIH2O95376 493 aa5.58□□□□□ -1.52
VPS41-205ENST00000414632 ASMTLO95671 621 aa5.58□□□□□ -1.52
VPS41-205ENST00000414632 POLR2MP0CAP2 368 aa5.58□□□□□ -1.52
VPS41-205ENST00000414632 SYN1P17600 705 aa5.58□□□□□ -1.52
VPS41-205ENST00000414632 PDIA3P30101 505 aaKnown RBP5.58□□□□□ -1.52
VPS41-205ENST00000414632 HSD17B4P51659 736 aa5.58□□□□□ -1.52
VPS41-205ENST00000414632 AK2P54819 239 aa5.58□□□□□ -1.52
VPS41-205ENST00000414632 NAPAP54920 295 aa5.58□□□□□ -1.52
VPS41-205ENST00000414632 RING1Q06587 406 aa5.58□□□□□ -1.52
VPS41-205ENST00000414632 TCEA2Q15560 299 aa5.58□□□□□ -1.52
VPS41-205ENST00000414632 LRRC26Q2I0M4 334 aa5.58□□□□□ -1.52
VPS41-205ENST00000414632 GNPTABQ3T906 1256 aa5.58□□□□□ -1.52
VPS41-205ENST00000414632 PPM1JQ5JR12 505 aa5.58□□□□□ -1.52
VPS41-205ENST00000414632 HP1BP3Q5SSJ5 553 aaPredicted RBP5.58□□□□□ -1.52
VPS41-205ENST00000414632 CHSY3Q70JA7 882 aa5.58□□□□□ -1.52
VPS41-205ENST00000414632 TLK2Q86UE8 772 aa5.58□□□□□ -1.52
VPS41-205ENST00000414632 DMRTC2Q8IXT2 367 aaPredicted RBP5.58□□□□□ -1.52
VPS41-205ENST00000414632 MSL3Q8N5Y2 521 aaKnown RBP5.58□□□□□ -1.52
VPS41-205ENST00000414632 SMARCC2Q8TAQ2 1214 aa5.58□□□□□ -1.52
VPS41-205ENST00000414632 EDARADDQ8WWZ3 215 aa5.58□□□□□ -1.52
VPS41-205ENST00000414632 BTBD6Q96KE9 485 aa5.58□□□□□ -1.52
VPS41-205ENST00000414632 SPATA9Q9BWV2 254 aa5.58□□□□□ -1.52
VPS41-205ENST00000414632 SLC26A6Q9BXS9 759 aa5.58□□□□□ -1.52
VPS41-205ENST00000414632 WDR11Q9BZH6 1224 aa5.58□□□□□ -1.52
VPS41-205ENST00000414632 VTA1Q9NP79 307 aa5.58□□□□□ -1.52
VPS41-205ENST00000414632 PXMP2Q9NR77 195 aa5.58□□□□□ -1.52
VPS41-205ENST00000414632 RAD18Q9NS91 495 aa5.58□□□□□ -1.52
VPS41-205ENST00000414632 NRBP1Q9UHY1 535 aa5.58□□□□□ -1.52
VPS41-205ENST00000414632 PNMA2Q9UL42 364 aa5.58□□□□□ -1.52
VPS41-205ENST00000414632 ZMYND8Q9ULU4 1186 aaPredicted RBP5.58□□□□□ -1.52
VPS41-205ENST00000414632 ATP11BQ9Y2G3 1177 aa5.58□□□□□ -1.52
VPS41-205ENST00000414632 PCDHGC5Q9Y5F6 944 aa5.58□□□□□ -1.52
VPS41-205ENST00000414632 TRIP12Q14669 1992 aaPredicted RBP5.58□□□□□ -1.52
VPS41-205ENST00000414632 NID2Q14112 1375 aa5.57□□□□□ -1.52
VPS41-205ENST00000414632 SCN5AQ14524 2016 aa5.57□□□□□ -1.52
VPS41-205ENST00000414632 LOC100996750A0A140TA64 210 aa5.57□□□□□ -1.52
VPS41-205ENST00000414632 A0A1W2PQ45 241 aaPredicted RBP5.57□□□□□ -1.52
VPS41-205ENST00000414632 A0A1W2PQY0 241 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms