RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 RPS6KA3P51812 740 aa4.33□□□□□ -1.72
LINC01048-201ENST00000414480 GSCP56915 257 aaPredicted RBP4.33□□□□□ -1.72
LINC01048-201ENST00000414480 ICA1Q05084 483 aa4.33□□□□□ -1.72
LINC01048-201ENST00000414480 PPP2R3AQ06190 1150 aa4.33□□□□□ -1.72
LINC01048-201ENST00000414480 BECN1Q14457 450 aa4.33□□□□□ -1.72
LINC01048-201ENST00000414480 IQCB1Q15051 598 aa4.33□□□□□ -1.72
LINC01048-201ENST00000414480 RABEP1Q15276 862 aa4.33□□□□□ -1.72
LINC01048-201ENST00000414480 NFKBIBQ15653 356 aa4.33□□□□□ -1.72
LINC01048-201ENST00000414480 CCNG2Q16589 344 aa4.33□□□□□ -1.72
LINC01048-201ENST00000414480 C21orf62-AS1Q17RA5 79 aa4.33□□□□□ -1.72
LINC01048-201ENST00000414480 LRRFIP1Q32MZ4 808 aaKnown RBP4.33□□□□□ -1.72
LINC01048-201ENST00000414480 GFOD2Q3B7J2 385 aa4.33□□□□□ -1.72
LINC01048-201ENST00000414480 BOLA3Q53S33 107 aa4.33□□□□□ -1.72
LINC01048-201ENST00000414480 SPATA1Q5VX52 437 aa4.33□□□□□ -1.72
LINC01048-201ENST00000414480 NUGGCQ68CJ6 796 aa4.33□□□□□ -1.72
LINC01048-201ENST00000414480 NAIF1Q69YI7 327 aaPredicted RBP4.33□□□□□ -1.72
LINC01048-201ENST00000414480 ITPRIPL1Q6GPH6 555 aa4.33□□□□□ -1.72
LINC01048-201ENST00000414480 PDE12Q6L8Q7 609 aaKnown RBP4.33□□□□□ -1.72
LINC01048-201ENST00000414480 KDELC1Q6UW63 502 aa4.33□□□□□ -1.72
LINC01048-201ENST00000414480 PPP1R21Q6ZMI0 780 aa4.33□□□□□ -1.72
LINC01048-201ENST00000414480 HOOK3Q86VS8 718 aa4.33□□□□□ -1.72
LINC01048-201ENST00000414480 ZNF654Q8IZM8 581 aa4.33□□□□□ -1.72
LINC01048-201ENST00000414480 SLC7A5P1Q8MH63 180 aa4.33□□□□□ -1.72
LINC01048-201ENST00000414480 TMCO5AQ8N6Q1 288 aa4.33□□□□□ -1.72
LINC01048-201ENST00000414480 C12orf50Q8NA57 414 aaPredicted RBP4.33□□□□□ -1.72
LINC01048-201ENST00000414480 BBOF1Q8ND07 529 aa4.33□□□□□ -1.72
LINC01048-201ENST00000414480 PI4K2BQ8TCG2 481 aa4.33□□□□□ -1.72
LINC01048-201ENST00000414480 KIF1BPQ96EK5 621 aa4.33□□□□□ -1.72
LINC01048-201ENST00000414480 CDCA5Q96FF9 252 aa4.33□□□□□ -1.72
LINC01048-201ENST00000414480 SNX27Q96L92 541 aa4.33□□□□□ -1.72
LINC01048-201ENST00000414480 PRIMPOLQ96LW4 560 aa4.33□□□□□ -1.72
LINC01048-201ENST00000414480 DEPDC7Q96QD5 511 aa4.33□□□□□ -1.72
LINC01048-201ENST00000414480 BARD1Q99728 777 aaKnown RBP4.33□□□□□ -1.72
LINC01048-201ENST00000414480 HAUS7Q99871 368 aa4.33□□□□□ -1.72
LINC01048-201ENST00000414480 UQCC2Q9BRT2 126 aa4.33□□□□□ -1.72
LINC01048-201ENST00000414480 TMPRSS13Q9BYE2 586 aa4.33□□□□□ -1.72
LINC01048-201ENST00000414480 NRDE2Q9H7Z3 1164 aa4.33□□□□□ -1.72
LINC01048-201ENST00000414480 KANSL2Q9H9L4 492 aa4.33□□□□□ -1.72
LINC01048-201ENST00000414480 ZCCHC17Q9NP64 241 aaKnown RBP4.33□□□□□ -1.72
LINC01048-201ENST00000414480 PLCB1Q9NQ66 1216 aa4.33□□□□□ -1.72
LINC01048-201ENST00000414480 PAK6Q9NQU5 681 aaPredicted RBP4.33□□□□□ -1.72
LINC01048-201ENST00000414480 HERC5Q9UII4 1024 aaKnown RBP4.33□□□□□ -1.72
LINC01048-201ENST00000414480 SH3BGRL2Q9UJC5 107 aa4.33□□□□□ -1.72
LINC01048-201ENST00000414480 PNMA8BQ9ULN7 279 aaPredicted RBP4.33□□□□□ -1.72
LINC01048-201ENST00000414480 MRPL11Q9Y3B7 192 aaKnown RBP4.33□□□□□ -1.72
LINC01048-201ENST00000414480 TTLL3Q9Y4R7 772 aa4.33□□□□□ -1.72
LINC01048-201ENST00000414480 RIC1Q4ADV7 1423 aa4.32□□□□□ -1.72
LINC01048-201ENST00000414480 ABCC12Q96J65 1359 aa4.32□□□□□ -1.72
LINC01048-201ENST00000414480 KIF7Q2M1P5 1343 aa4.32□□□□□ -1.72
LINC01048-201ENST00000414480 SYNGAP1Q96PV0 1343 aa4.32□□□□□ -1.72
LINC01048-201ENST00000414480 DBX1A6NMT0 343 aa4.32□□□□□ -1.72
LINC01048-201ENST00000414480 HNRNPCL2B2RXH8 293 aa4.32□□□□□ -1.72
LINC01048-201ENST00000414480 F8W031 263 aaPredicted RBP4.32□□□□□ -1.72
LINC01048-201ENST00000414480 EIF3FO00303 357 aaPredicted RBP4.32□□□□□ -1.72
LINC01048-201ENST00000414480 BIN1O00499 593 aa4.32□□□□□ -1.72
LINC01048-201ENST00000414480 ZBTB43O43298 467 aa4.32□□□□□ -1.72
LINC01048-201ENST00000414480 HNRNPCL1O60812 293 aaKnown RBP4.32□□□□□ -1.72
LINC01048-201ENST00000414480 ZNF189O75820 626 aaPredicted RBP4.32□□□□□ -1.72
LINC01048-201ENST00000414480 RAD17O75943 681 aa4.32□□□□□ -1.72
LINC01048-201ENST00000414480 MBD4O95243 580 aa4.32□□□□□ -1.72
LINC01048-201ENST00000414480 PAPLNO95428 1278 aa4.32□□□□□ -1.72
LINC01048-201ENST00000414480 A1BGP04217 495 aa4.32□□□□□ -1.72
LINC01048-201ENST00000414480 CYP1A2P05177 515 aa4.32□□□□□ -1.72
LINC01048-201ENST00000414480 PCP11498 1178 aaKnown RBP4.32□□□□□ -1.72
LINC01048-201ENST00000414480 EEF2P13639 858 aaKnown RBP4.32□□□□□ -1.72
LINC01048-201ENST00000414480 STMN1P16949 149 aa4.32□□□□□ -1.72
LINC01048-201ENST00000414480 ZFXP17010 805 aaPredicted RBP4.32□□□□□ -1.72
LINC01048-201ENST00000414480 SKIV2L2P42285 1042 aaKnown RBP4.32□□□□□ -1.72
LINC01048-201ENST00000414480 LIMK1P53667 647 aa4.32□□□□□ -1.72
LINC01048-201ENST00000414480 ARPC4P59998 168 aa4.32□□□□□ -1.72
LINC01048-201ENST00000414480 FKBP1BP68106 108 aa4.32□□□□□ -1.72
LINC01048-201ENST00000414480 GABREP78334 506 aa4.32□□□□□ -1.72
LINC01048-201ENST00000414480 NFKB2Q00653 900 aa4.32□□□□□ -1.72
LINC01048-201ENST00000414480 PFKPQ01813 784 aa4.32□□□□□ -1.72
LINC01048-201ENST00000414480 ZBTB16Q05516 673 aa4.32□□□□□ -1.72
LINC01048-201ENST00000414480 LRRC74AQ0VAA2 488 aa4.32□□□□□ -1.72
LINC01048-201ENST00000414480 TBX2Q13207 712 aaPredicted RBP4.32□□□□□ -1.72
LINC01048-201ENST00000414480 SEMA3AQ14563 771 aa4.32□□□□□ -1.72
LINC01048-201ENST00000414480 FBLN7Q53RD9 439 aa4.32□□□□□ -1.72
LINC01048-201ENST00000414480 FAM26DQ5JW98 314 aa4.32□□□□□ -1.72
LINC01048-201ENST00000414480 LDLRAD1Q5T700 205 aa4.32□□□□□ -1.72
LINC01048-201ENST00000414480 CCDC30Q5VVM6 783 aa4.32□□□□□ -1.72
LINC01048-201ENST00000414480 NXNQ6DKJ4 435 aa4.32□□□□□ -1.72
LINC01048-201ENST00000414480 ARHGEF18Q6ZSZ5 1173 aa4.32□□□□□ -1.72
LINC01048-201ENST00000414480 FAM47EQ6ZV65 393 aa4.32□□□□□ -1.72
LINC01048-201ENST00000414480 RAPH1Q70E73 1250 aa4.32□□□□□ -1.72
LINC01048-201ENST00000414480 MILR1Q7Z6M3 343 aa4.32□□□□□ -1.72
LINC01048-201ENST00000414480 ZAR1Q86SH2 424 aa4.32□□□□□ -1.72
LINC01048-201ENST00000414480 CCDC84Q86UT8 332 aaPredicted RBP4.32□□□□□ -1.72
LINC01048-201ENST00000414480 C7orf61Q8IZ16 206 aa4.32□□□□□ -1.72
LINC01048-201ENST00000414480 VPS52Q8N1B4 723 aa4.32□□□□□ -1.72
LINC01048-201ENST00000414480 CARNMT1Q8N4J0 409 aa4.32□□□□□ -1.72
LINC01048-201ENST00000414480 TRIML2Q8N7C3 387 aa4.32□□□□□ -1.72
LINC01048-201ENST00000414480 CCDC110Q8TBZ0 833 aa4.32□□□□□ -1.72
LINC01048-201ENST00000414480 GPR152Q8TDT2 470 aa4.32□□□□□ -1.72
LINC01048-201ENST00000414480 EPS8L3Q8TE67 593 aaKnown RBP4.32□□□□□ -1.72
LINC01048-201ENST00000414480 PARD3BQ8TEW8 1205 aa4.32□□□□□ -1.72
LINC01048-201ENST00000414480 NOC3LQ8WTT2 800 aaKnown RBP4.32□□□□□ -1.72
LINC01048-201ENST00000414480 RUFY2Q8WXA3 655 aa4.32□□□□□ -1.72
LINC01048-201ENST00000414480 CCT6BQ92526 530 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms