RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 LIFRP42702 1097 aa10.17□□□□□ -0.78
SNHG3-201ENST00000413987 VSNL1P62760 191 aa10.17□□□□□ -0.78
SNHG3-201ENST00000413987 PSMD6Q15008 389 aa10.17□□□□□ -0.78
SNHG3-201ENST00000413987 CCNG2Q16589 344 aa10.17□□□□□ -0.78
SNHG3-201ENST00000413987 ANGEL2Q5VTE6 544 aaKnown RBP10.17□□□□□ -0.78
SNHG3-201ENST00000413987 C4orf50Q6ZRC1 276 aa10.17□□□□□ -0.78
SNHG3-201ENST00000413987 CCDC84Q86UT8 332 aaPredicted RBP10.17□□□□□ -0.78
SNHG3-201ENST00000413987 MYLK4Q86YV6 388 aaPredicted RBP10.17□□□□□ -0.78
SNHG3-201ENST00000413987 GPC2Q8N158 579 aa10.17□□□□□ -0.78
SNHG3-201ENST00000413987 LRRC47Q8N1G4 583 aaKnown RBP10.17□□□□□ -0.78
SNHG3-201ENST00000413987 CCDC148Q8NFR7 591 aa10.17□□□□□ -0.78
SNHG3-201ENST00000413987 BRSK1Q8TDC3 778 aa10.17□□□□□ -0.78
SNHG3-201ENST00000413987 C8orf76Q96K31 380 aa10.17□□□□□ -0.78
SNHG3-201ENST00000413987 FANCFQ9NPI8 374 aa10.17□□□□□ -0.78
SNHG3-201ENST00000413987 MYH8P13535 1937 aa10.16□□□□□ -0.78
SNHG3-201ENST00000413987 A0A0B4J203 849 aa10.16□□□□□ -0.78
SNHG3-201ENST00000413987 C2orf72A6NCS6 295 aa10.16□□□□□ -0.78
SNHG3-201ENST00000413987 RCCD1A6NED2 376 aa10.16□□□□□ -0.78
SNHG3-201ENST00000413987 PPP6R2O75170 966 aa10.16□□□□□ -0.78
SNHG3-201ENST00000413987 PLEKHA8P1O95397 391 aa10.16□□□□□ -0.78
SNHG3-201ENST00000413987 GOLGA8HP0CJ92 632 aa10.16□□□□□ -0.78
SNHG3-201ENST00000413987 ATP6V1B1P15313 513 aa10.16□□□□□ -0.78
SNHG3-201ENST00000413987 RPS12P25398 132 aaKnown RBP10.16□□□□□ -0.78
SNHG3-201ENST00000413987 GOLGA8FQ08AF8 430 aa10.16□□□□□ -0.78
SNHG3-201ENST00000413987 GOLGA8DPQ0D2H9 430 aa10.16□□□□□ -0.78
SNHG3-201ENST00000413987 SLC39A14Q15043 492 aa10.16□□□□□ -0.78
SNHG3-201ENST00000413987 FIP1L1Q6UN15 594 aaKnown RBP10.16□□□□□ -0.78
SNHG3-201ENST00000413987 NLRP14Q86W24 1093 aa10.16□□□□□ -0.78
SNHG3-201ENST00000413987 SLC41A1Q8IVJ1 513 aa10.16□□□□□ -0.78
SNHG3-201ENST00000413987 NAPGQ99747 312 aaPredicted RBP10.16□□□□□ -0.78
SNHG3-201ENST00000413987 TARS2Q9BW92 718 aaKnown RBP10.16□□□□□ -0.78
SNHG3-201ENST00000413987 IRAK4Q9NWZ3 460 aa10.16□□□□□ -0.78
SNHG3-201ENST00000413987 PI4KBQ9UBF8 816 aa10.16□□□□□ -0.78
SNHG3-201ENST00000413987 HPSEQ9Y251 543 aa10.16□□□□□ -0.78
SNHG3-201ENST00000413987 FAM221AA4D161 298 aa10.15□□□□□ -0.78
SNHG3-201ENST00000413987 PHACTR2O75167 634 aa10.15□□□□□ -0.78
SNHG3-201ENST00000413987 RHOXF2BP0C7M4 288 aa10.15□□□□□ -0.78
SNHG3-201ENST00000413987 HNRNPH1P31943 449 aaKnown RBP10.15□□□□□ -0.78
SNHG3-201ENST00000413987 GUCY1A2P33402 732 aa10.15□□□□□ -0.78
SNHG3-201ENST00000413987 IREB2P48200 963 aaKnown RBP10.15□□□□□ -0.78
SNHG3-201ENST00000413987 ADKP55263 362 aaKnown RBP10.15□□□□□ -0.78
SNHG3-201ENST00000413987 TROAPQ12815 778 aa10.15□□□□□ -0.78
SNHG3-201ENST00000413987 ZNF569Q5MCW4 686 aa10.15□□□□□ -0.78
SNHG3-201ENST00000413987 C6orf118Q5T5N4 469 aa10.15□□□□□ -0.78
SNHG3-201ENST00000413987 CFAP58Q5T655 872 aa10.15□□□□□ -0.78
SNHG3-201ENST00000413987 GBP6Q6ZN66 633 aa10.15□□□□□ -0.78
SNHG3-201ENST00000413987 SPATS2Q86XZ4 545 aaKnown RBP10.15□□□□□ -0.78
SNHG3-201ENST00000413987 TSEN2Q8NCE0 465 aaKnown RBP10.15□□□□□ -0.78
SNHG3-201ENST00000413987 STON2Q8WXE9 905 aa10.15□□□□□ -0.78
SNHG3-201ENST00000413987 ZNF75CPQ92670 426 aaPredicted RBP10.15□□□□□ -0.78
SNHG3-201ENST00000413987 HDAC2Q92769 488 aaKnown RBP10.15□□□□□ -0.78
SNHG3-201ENST00000413987 RBM18Q96H35 190 aaKnown RBP10.15□□□□□ -0.78
SNHG3-201ENST00000413987 TMEM47Q9BQJ4 181 aa10.15□□□□□ -0.78
SNHG3-201ENST00000413987 RHOXF2Q9BQY4 288 aa10.15□□□□□ -0.78
SNHG3-201ENST00000413987 MRPL44Q9H9J2 332 aaKnown RBP10.15□□□□□ -0.78
SNHG3-201ENST00000413987 INTS13Q9NVM9 706 aa10.15□□□□□ -0.78
SNHG3-201ENST00000413987 GGA3Q9NZ52 723 aa10.15□□□□□ -0.78
SNHG3-201ENST00000413987 WDR35Q9P2L0 1181 aa10.15□□□□□ -0.78
SNHG3-201ENST00000413987 ZBTB21Q9ULJ3 1066 aa10.15□□□□□ -0.78
SNHG3-201ENST00000413987 ATXN2Q99700 1313 aaKnown RBP10.15□□□□□ -0.78
SNHG3-201ENST00000413987 LRRIQ3A6PVS8 624 aaPredicted RBP10.15□□□□□ -0.78
SNHG3-201ENST00000413987 H7C1D1 291 aa10.15□□□□□ -0.78
SNHG3-201ENST00000413987 M0R3H8 397 aa10.15□□□□□ -0.78
SNHG3-201ENST00000413987 ENTPD3O75355 529 aa10.15□□□□□ -0.78
SNHG3-201ENST00000413987 PRPF6O94906 941 aaKnown RBP10.15□□□□□ -0.78
SNHG3-201ENST00000413987 MAP3K6O95382 1288 aa10.15□□□□□ -0.78
SNHG3-201ENST00000413987 PCP11498 1178 aaKnown RBP10.15□□□□□ -0.78
SNHG3-201ENST00000413987 BTF3P20290 206 aaKnown RBP10.15□□□□□ -0.78
SNHG3-201ENST00000413987 CHKAP35790 457 aa10.15□□□□□ -0.78
SNHG3-201ENST00000413987 SKOR1P84550 965 aa10.15□□□□□ -0.78
SNHG3-201ENST00000413987 SSRP1Q08945 709 aaKnown RBP10.15□□□□□ -0.78
SNHG3-201ENST00000413987 STRN3Q13033 797 aa10.15□□□□□ -0.78
SNHG3-201ENST00000413987 GPR158Q5T848 1215 aa10.15□□□□□ -0.78
SNHG3-201ENST00000413987 ITPRIPL1Q6GPH6 555 aa10.15□□□□□ -0.78
SNHG3-201ENST00000413987 PPFIBP1Q86W92 1011 aa10.15□□□□□ -0.78
SNHG3-201ENST00000413987 MLKLQ8NB16 471 aa10.15□□□□□ -0.78
SNHG3-201ENST00000413987 FAM76AQ8TAV0 307 aa10.15□□□□□ -0.78
SNHG3-201ENST00000413987 C17orf50Q8WW18 174 aa10.15□□□□□ -0.78
SNHG3-201ENST00000413987 FAM151AQ8WW52 585 aa10.15□□□□□ -0.78
SNHG3-201ENST00000413987 TRIM63Q969Q1 353 aa10.15□□□□□ -0.78
SNHG3-201ENST00000413987 CCDC51Q96ER9 411 aa10.15□□□□□ -0.78
SNHG3-201ENST00000413987 LMAN2LQ9H0V9 348 aa10.15□□□□□ -0.78
SNHG3-201ENST00000413987 TOPORSQ9NS56 1045 aaPredicted RBP10.15□□□□□ -0.78
SNHG3-201ENST00000413987 SUFUQ9UMX1 484 aa10.15□□□□□ -0.78
SNHG3-201ENST00000413987 FAM169AQ9Y6X4 670 aa10.15□□□□□ -0.78
SNHG3-201ENST00000413987 ATRNL1Q5VV63 1379 aa10.14□□□□□ -0.79
SNHG3-201ENST00000413987 OPLAHO14841 1288 aa10.14□□□□□ -0.79
SNHG3-201ENST00000413987 SYF2O95926 243 aaKnown RBP10.14□□□□□ -0.79
SNHG3-201ENST00000413987 INPP5BP32019 993 aa10.14□□□□□ -0.79
SNHG3-201ENST00000413987 PRKG1Q13976 671 aa10.14□□□□□ -0.79
SNHG3-201ENST00000413987 NTRK3Q16288 839 aa10.14□□□□□ -0.79
SNHG3-201ENST00000413987 RTN1Q16799 776 aa10.14□□□□□ -0.79
SNHG3-201ENST00000413987 CERKLQ49MI3 558 aaPredicted RBP10.14□□□□□ -0.79
SNHG3-201ENST00000413987 LLGL2Q6P1M3 1020 aa10.14□□□□□ -0.79
SNHG3-201ENST00000413987 SLC44A2Q8IWA5 706 aaPredicted RBP10.14□□□□□ -0.79
SNHG3-201ENST00000413987 FANCBQ8NB91 859 aa10.14□□□□□ -0.79
SNHG3-201ENST00000413987 TTC13Q8NBP0 860 aa10.14□□□□□ -0.79
SNHG3-201ENST00000413987 ZSWIM2Q8NEG5 633 aa10.14□□□□□ -0.79
SNHG3-201ENST00000413987 NEDD1Q8NHV4 660 aa10.14□□□□□ -0.79
SNHG3-201ENST00000413987 MAML1Q92585 1016 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms