RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 C12orf65Q9H3J6 166 aaKnown RBP5.08□□□□□ -1.6
HMGB1P11-201ENST00000413899 METTL14Q9HCE5 456 aaKnown RBP5.08□□□□□ -1.6
HMGB1P11-201ENST00000413899 AASDHPPTQ9NRN7 309 aa5.08□□□□□ -1.6
HMGB1P11-201ENST00000413899 GPRC5DQ9NZD1 345 aa5.08□□□□□ -1.6
HMGB1P11-201ENST00000413899 ZBTB21Q9ULJ3 1066 aa5.08□□□□□ -1.6
HMGB1P11-201ENST00000413899 GIT1Q9Y2X7 761 aa5.08□□□□□ -1.6
HMGB1P11-201ENST00000413899 LUC7L2Q9Y383 392 aaKnown RBP5.08□□□□□ -1.6
HMGB1P11-201ENST00000413899 FAM171A2A8MVW0 826 aa5.07□□□□□ -1.6
HMGB1P11-201ENST00000413899 PATE3B3GLJ2 98 aa5.07□□□□□ -1.6
HMGB1P11-201ENST00000413899 AKAP10O43572 662 aa5.07□□□□□ -1.6
HMGB1P11-201ENST00000413899 PRAMEF4O60810 478 aa5.07□□□□□ -1.6
HMGB1P11-201ENST00000413899 GSPT1P15170 499 aaKnown RBP5.07□□□□□ -1.6
HMGB1P11-201ENST00000413899 RAB27AP51159 221 aa5.07□□□□□ -1.6
HMGB1P11-201ENST00000413899 GLB1LQ6UWU2 654 aa5.07□□□□□ -1.6
HMGB1P11-201ENST00000413899 LIMS2Q7Z4I7 341 aa5.07□□□□□ -1.6
HMGB1P11-201ENST00000413899 LILRA3Q8N6C8 439 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P11-201ENST00000413899 GNRHR2Q96P88 292 aa5.07□□□□□ -1.6
HMGB1P11-201ENST00000413899 NUP88Q99567 741 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P11-201ENST00000413899 CDH19Q9H159 772 aa5.07□□□□□ -1.6
HMGB1P11-201ENST00000413899 BCO1Q9HAY6 547 aa5.07□□□□□ -1.6
HMGB1P11-201ENST00000413899 DMRT3Q9NQL9 472 aa5.07□□□□□ -1.6
HMGB1P11-201ENST00000413899 TLR9Q9NR96 1032 aa5.07□□□□□ -1.6
HMGB1P11-201ENST00000413899 SAP30BPQ9UHR5 308 aaKnown RBP5.07□□□□□ -1.6
HMGB1P11-201ENST00000413899 A0A1W2PRX2 142 aa5.06□□□□□ -1.6
HMGB1P11-201ENST00000413899 UBE2QL1A1L167 161 aa5.06□□□□□ -1.6
HMGB1P11-201ENST00000413899 AKR1B10O60218 316 aa5.06□□□□□ -1.6
HMGB1P11-201ENST00000413899 VCAM1P19320 739 aa5.06□□□□□ -1.6
HMGB1P11-201ENST00000413899 SLC16A1P53985 500 aa5.06□□□□□ -1.6
HMGB1P11-201ENST00000413899 NPEPPSP55786 919 aa5.06□□□□□ -1.6
HMGB1P11-201ENST00000413899 CTSWP56202 376 aa5.06□□□□□ -1.6
HMGB1P11-201ENST00000413899 DUSP2Q05923 314 aa5.06□□□□□ -1.6
HMGB1P11-201ENST00000413899 NFE2Q16621 373 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P11-201ENST00000413899 Q6ZVL8 140 aa5.06□□□□□ -1.6
HMGB1P11-201ENST00000413899 OR7D4Q8NG98 312 aa5.06□□□□□ -1.6
HMGB1P11-201ENST00000413899 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.06□□□□□ -1.6
HMGB1P11-201ENST00000413899 NRG4Q8WWG1 115 aa5.06□□□□□ -1.6
HMGB1P11-201ENST00000413899 JDP2Q8WYK2 163 aa5.06□□□□□ -1.6
HMGB1P11-201ENST00000413899 COA7Q96BR5 231 aa5.06□□□□□ -1.6
HMGB1P11-201ENST00000413899 RTFDC1Q9BY42 306 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P11-201ENST00000413899 RHOBTB2Q9BYZ6 727 aa5.06□□□□□ -1.6
HMGB1P11-201ENST00000413899 TRPS1Q9UHF7 1281 aa5.06□□□□□ -1.6
HMGB1P11-201ENST00000413899 ANKRD6Q9Y2G4 727 aa5.06□□□□□ -1.6
HMGB1P11-201ENST00000413899 IPPQ9Y573 584 aa5.06□□□□□ -1.6
HMGB1P11-201ENST00000413899 FOXS1O43638 330 aa5.05□□□□□ -1.6
HMGB1P11-201ENST00000413899 ITGA10O75578 1167 aa5.05□□□□□ -1.6
HMGB1P11-201ENST00000413899 RFPL1O75677 317 aa5.05□□□□□ -1.6
HMGB1P11-201ENST00000413899 ENDOD1O94919 500 aa5.05□□□□□ -1.6
HMGB1P11-201ENST00000413899 ECHS1P30084 290 aa5.05□□□□□ -1.6
HMGB1P11-201ENST00000413899 MRPL49Q13405 166 aaKnown RBP5.05□□□□□ -1.6
HMGB1P11-201ENST00000413899 SEPT2Q15019 361 aa5.05□□□□□ -1.6
HMGB1P11-201ENST00000413899 ERICH6BQ5W0A0 696 aa5.05□□□□□ -1.6
HMGB1P11-201ENST00000413899 FAM111BQ6SJ93 734 aa5.05□□□□□ -1.6
HMGB1P11-201ENST00000413899 POLNQ7Z5Q5 900 aa5.05□□□□□ -1.6
HMGB1P11-201ENST00000413899 RAVER1Q8IY67 606 aaKnown RBP5.05□□□□□ -1.6
HMGB1P11-201ENST00000413899 FUKQ8N0W3 1084 aa5.05□□□□□ -1.6
HMGB1P11-201ENST00000413899 TTC9BQ8N6N2 239 aa5.05□□□□□ -1.6
HMGB1P11-201ENST00000413899 PPM1NQ8N819 430 aa5.05□□□□□ -1.6
HMGB1P11-201ENST00000413899 GIMAP8Q8ND71 665 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P11-201ENST00000413899 OR2I1PQ8NGU4 316 aa5.05□□□□□ -1.6
HMGB1P11-201ENST00000413899 HSPBAP1Q96EW2 488 aa5.05□□□□□ -1.6
HMGB1P11-201ENST00000413899 SAMD11Q96NU1 681 aa5.05□□□□□ -1.6
HMGB1P11-201ENST00000413899 MPHOSPH9Q99550 1183 aa5.05□□□□□ -1.6
HMGB1P11-201ENST00000413899 TCF25Q9BQ70 676 aa5.05□□□□□ -1.6
HMGB1P11-201ENST00000413899 CSRNP2Q9H175 543 aa5.05□□□□□ -1.6
HMGB1P11-201ENST00000413899 PLA2G3Q9NZ20 509 aa5.05□□□□□ -1.6
HMGB1P11-201ENST00000413899 IP6K2Q9UHH9 426 aa5.05□□□□□ -1.6
HMGB1P11-201ENST00000413899 RCAN3Q9UKA8 241 aa5.05□□□□□ -1.6
HMGB1P11-201ENST00000413899 PNMA8BQ9ULN7 279 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P11-201ENST00000413899 ZFR2Q9UPR6 939 aaKnown RBP5.05□□□□□ -1.6
HMGB1P11-201ENST00000413899 DNM3Q9UQ16 869 aa5.05□□□□□ -1.6
HMGB1P11-201ENST00000413899 EID1Q9Y6B2 187 aa5.05□□□□□ -1.6
HMGB1P11-201ENST00000413899 HTRA2O43464 458 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P11-201ENST00000413899 HSP90B1P14625 803 aaKnown RBP5.04□□□□□ -1.6
HMGB1P11-201ENST00000413899 EDNRBP24530 442 aa5.04□□□□□ -1.6
HMGB1P11-201ENST00000413899 AKAP5P24588 427 aa5.04□□□□□ -1.6
HMGB1P11-201ENST00000413899 ADSLP30566 484 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P11-201ENST00000413899 SREBF1P36956 1147 aa5.04□□□□□ -1.6
HMGB1P11-201ENST00000413899 CASRP41180 1078 aa5.04□□□□□ -1.6
HMGB1P11-201ENST00000413899 GZMKP49863 264 aa5.04□□□□□ -1.6
HMGB1P11-201ENST00000413899 KIF23Q02241 960 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P11-201ENST00000413899 GRM7Q14831 915 aa5.04□□□□□ -1.6
HMGB1P11-201ENST00000413899 NOMO1Q15155 1222 aa5.04□□□□□ -1.6
HMGB1P11-201ENST00000413899 MFSD5Q6N075 450 aa5.04□□□□□ -1.6
HMGB1P11-201ENST00000413899 HDAC10Q969S8 669 aa5.04□□□□□ -1.6
HMGB1P11-201ENST00000413899 RELTQ969Z4 430 aa5.04□□□□□ -1.6
HMGB1P11-201ENST00000413899 CYFIP2Q96F07 1278 aa5.04□□□□□ -1.6
HMGB1P11-201ENST00000413899 IL17RAQ96F46 866 aa5.04□□□□□ -1.6
HMGB1P11-201ENST00000413899 OR14A2Q96R54 314 aa5.04□□□□□ -1.6
HMGB1P11-201ENST00000413899 BDH2Q9BUT1 245 aa5.04□□□□□ -1.6
HMGB1P11-201ENST00000413899 CD248Q9HCU0 757 aa5.04□□□□□ -1.6
HMGB1P11-201ENST00000413899 ZIM2Q9NZV7 527 aa5.04□□□□□ -1.6
HMGB1P11-201ENST00000413899 SERPINB13Q9UIV8 391 aa5.04□□□□□ -1.6
HMGB1P11-201ENST00000413899 ZNF180Q9UJW8 692 aa5.04□□□□□ -1.6
HMGB1P11-201ENST00000413899 LIMCH1Q9UPQ0 1083 aa5.04□□□□□ -1.6
HMGB1P11-201ENST00000413899 SIK3Q9Y2K2 1263 aa5.04□□□□□ -1.6
HMGB1P11-201ENST00000413899 K7ESM1 405 aa5.03□□□□□ -1.6
HMGB1P11-201ENST00000413899 ZSCAN20P17040 1043 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P11-201ENST00000413899 GUCY1A2P33402 732 aa5.03□□□□□ -1.6
HMGB1P11-201ENST00000413899 SLC6A9P48067 706 aa5.03□□□□□ -1.6
HMGB1P11-201ENST00000413899 FOXL1Q12952 345 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms