RNA–Protein interactions for RNA: ENST00000413023.1

HMGN1P34-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 34, humanhuman

BASIC

Gene HMGN1P34, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P34-201ENST00000413023 GARTP22102 1010 aa9.39□□□□□ -0.91
HMGN1P34-201ENST00000413023 ACOT2P49753 483 aa9.39□□□□□ -0.91
HMGN1P34-201ENST00000413023 CLCN3P51790 818 aa9.39□□□□□ -0.91
HMGN1P34-201ENST00000413023 KIF11P52732 1056 aa9.39□□□□□ -0.91
HMGN1P34-201ENST00000413023 INHBEP58166 350 aa9.39□□□□□ -0.91
HMGN1P34-201ENST00000413023 NLRP11P59045 1033 aaKnown RBP9.39□□□□□ -0.91
HMGN1P34-201ENST00000413023 IGBP1P78318 339 aa9.39□□□□□ -0.91
HMGN1P34-201ENST00000413023 TNFAIP2Q03169 654 aa9.39□□□□□ -0.91
HMGN1P34-201ENST00000413023 ARID5AQ03989 594 aa9.39□□□□□ -0.91
HMGN1P34-201ENST00000413023 RAPGEF1Q13905 1077 aa9.39□□□□□ -0.91
HMGN1P34-201ENST00000413023 DRAP1Q14919 205 aaPredicted RBP9.39□□□□□ -0.91
HMGN1P34-201ENST00000413023 ENOX2Q16206 610 aaKnown RBP9.39□□□□□ -0.91
HMGN1P34-201ENST00000413023 ZNF569Q5MCW4 686 aa9.39□□□□□ -0.91
HMGN1P34-201ENST00000413023 EEF1DP3Q658K8 133 aa9.39□□□□□ -0.91
HMGN1P34-201ENST00000413023 ZNF662Q6ZS27 426 aa9.39□□□□□ -0.91
HMGN1P34-201ENST00000413023 INTS8Q75QN2 995 aaKnown RBP9.39□□□□□ -0.91
HMGN1P34-201ENST00000413023 ZNF571Q7Z3V5 609 aaPredicted RBP9.39□□□□□ -0.91
HMGN1P34-201ENST00000413023 DNAAF5Q86Y56 855 aa9.39□□□□□ -0.91
HMGN1P34-201ENST00000413023 GPD1LQ8N335 351 aa9.39□□□□□ -0.91
HMGN1P34-201ENST00000413023 SLC35F6Q8N357 371 aa9.39□□□□□ -0.91
HMGN1P34-201ENST00000413023 KIF18AQ8NI77 898 aa9.39□□□□□ -0.91
HMGN1P34-201ENST00000413023 DEPTORQ8TB45 409 aa9.39□□□□□ -0.91
HMGN1P34-201ENST00000413023 POMGNT1Q8WZA1 660 aa9.39□□□□□ -0.91
HMGN1P34-201ENST00000413023 KAT2BQ92831 832 aa9.39□□□□□ -0.91
HMGN1P34-201ENST00000413023 TATDN2Q93075 761 aa9.39□□□□□ -0.91
HMGN1P34-201ENST00000413023 FAM167AQ96KS9 214 aa9.39□□□□□ -0.91
HMGN1P34-201ENST00000413023 FAM213AQ9BRX8 229 aa9.39□□□□□ -0.91
HMGN1P34-201ENST00000413023 SYT11Q9BT88 431 aa9.39□□□□□ -0.91
HMGN1P34-201ENST00000413023 HAUS4Q9H6D7 363 aa9.39□□□□□ -0.91
HMGN1P34-201ENST00000413023 MINDY3Q9H8M7 445 aa9.39□□□□□ -0.91
HMGN1P34-201ENST00000413023 L2HGDHQ9H9P8 463 aa9.39□□□□□ -0.91
HMGN1P34-201ENST00000413023 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.39□□□□□ -0.91
HMGN1P34-201ENST00000413023 ZNHIT6Q9NWK9 470 aaKnown RBP9.39□□□□□ -0.91
HMGN1P34-201ENST00000413023 GCNT4Q9P109 453 aa9.39□□□□□ -0.91
HMGN1P34-201ENST00000413023 ZHX1Q9UKY1 873 aaPredicted RBP9.39□□□□□ -0.91
HMGN1P34-201ENST00000413023 TRPC6Q9Y210 931 aa9.39□□□□□ -0.91
HMGN1P34-201ENST00000413023 PPME1Q9Y570 386 aa9.39□□□□□ -0.91
HMGN1P34-201ENST00000413023 PTPRJQ12913 1337 aa9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 PHLPP2Q6ZVD8 1323 aa9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 MCM3APO60318 1980 aa9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 UQCRHLA0A096LP55 91 aa9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 SSU72P8A0A1W2PR75 194 aa9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 KIF2AO00139 706 aaPredicted RBP9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 PMM2O15305 246 aa9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 B4GALT5O43286 388 aa9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 EXTL3O43909 919 aa9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 FAM189A1O60320 539 aa9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 AOC2O75106 756 aa9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 TFRCP02786 760 aaKnown RBP9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 UQCRHP07919 91 aa9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 MMP3P08254 477 aa9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 KRT13P13646 458 aa9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 CYLC1P35663 651 aaPredicted RBP9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 TNFSF9P41273 254 aa9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 LIG4P49917 911 aa9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 SLC26A2P50443 739 aa9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 PTENP60484 403 aa9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 CLDN10P78369 228 aa9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 MYL7Q01449 175 aa9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 MAP2K1Q02750 393 aaPredicted RBP9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 PTK2Q05397 1052 aa9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 ASIC2Q16515 512 aa9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 ZNF484Q5JVG2 852 aa9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 LMBRD2Q68DH5 695 aaPredicted RBP9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 CDCA2Q69YH5 1023 aaPredicted RBP9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 CYP4F22Q6NT55 531 aa9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 RHPN2Q8IUC4 686 aa9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 KIAA0319LQ8IZA0 1049 aa9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 TMEM130Q8N3G9 435 aa9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 RNF149Q8NC42 400 aa9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 OR6J1Q8NGC5 347 aa9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 SLC30A5Q8TAD4 765 aa9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 TAS1R2Q8TE23 839 aa9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 CCDC102AQ96A19 550 aa9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 CCDC42Q96M95 316 aa9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 KREMEN1Q96MU8 473 aa9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 ACO2Q99798 780 aaKnown RBP9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 PACSIN1Q9BY11 444 aa9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 STK33Q9BYT3 514 aa9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 FZD8Q9H461 694 aa9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 IFT122Q9HBG6 1241 aa9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 ZFYVE28Q9HCC9 887 aa9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 PDE11AQ9HCR9 933 aa9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 PTPRHQ9HD43 1115 aa9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 ERAP1Q9NZ08 941 aa9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 GUCA1BQ9UMX6 200 aa9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 GABRQQ9UN88 632 aa9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 COQ4Q9Y3A0 265 aa9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 ARID2Q68CP9 1835 aa9.38□□□□□ -0.91
HMGN1P34-201ENST00000413023 CNTNAP2Q9UHC6 1331 aa9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 GOLGA6L9A6NEM1 432 aa9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 A6NJR5 290 aa9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 TMEM88BA6NKF7 163 aa9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 H0YCG3 227 aa9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 H3BRB1 525 aa9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 GPR25O00155 361 aa9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 DDX3XO00571 662 aaKnown RBP eCLIP9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 HNRNPDLO14979 420 aaKnown RBP9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 P4HA2O15460 535 aa9.37□□□□□ -0.91
HMGN1P34-201ENST00000413023 PJA2O43164 708 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms