RNA–Protein interactions for RNA: ENST00000411553.3

HCG11-201, Transcript of HLA complex group 11, humanhuman

BASIC

Gene HCG11, Length 5,696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG11-201ENST00000411553 ZNF746Q6NUN9 644 aaPredicted RBP19.49■□□□□ 0.71
HCG11-201ENST00000411553 SUFUQ9UMX1 484 aa19.49■□□□□ 0.71
HCG11-201ENST00000411553 RFX7Q2KHR2 1363 aa19.49■□□□□ 0.71
HCG11-201ENST00000411553 GPS1Q13098 491 aa19.49■□□□□ 0.71
HCG11-201ENST00000411553 EPHA7Q15375 998 aa19.49■□□□□ 0.71
HCG11-201ENST00000411553 TDP2O95551 362 aa19.49■□□□□ 0.71
HCG11-201ENST00000411553 KITP10721 976 aa19.49■□□□□ 0.71
HCG11-201ENST00000411553 PMS2P54278 862 aa19.49■□□□□ 0.71
HCG11-201ENST00000411553 ZNF211Q13398 564 aaPredicted RBP19.49■□□□□ 0.71
HCG11-201ENST00000411553 LDHDQ86WU2 507 aa19.49■□□□□ 0.71
HCG11-201ENST00000411553 SH3TC2Q8TF17 1288 aa19.49■□□□□ 0.71
HCG11-201ENST00000411553 BTBD6Q96KE9 485 aa19.49■□□□□ 0.71
HCG11-201ENST00000411553 WNT8AQ9H1J5 351 aa19.49■□□□□ 0.71
HCG11-201ENST00000411553 NDFIP2Q9NV92 336 aa19.49■□□□□ 0.71
HCG11-201ENST00000411553 MYO1DO94832 1006 aa19.49■□□□□ 0.71
HCG11-201ENST00000411553 TAP1Q03518 808 aa19.49■□□□□ 0.71
HCG11-201ENST00000411553 ZNF235Q14590 738 aa19.49■□□□□ 0.71
HCG11-201ENST00000411553 TNIP3Q96KP6 325 aa19.49■□□□□ 0.71
HCG11-201ENST00000411553 ZNF521Q96K83 1311 aa19.49■□□□□ 0.71
HCG11-201ENST00000411553 CDC27P30260 824 aa19.48■□□□□ 0.71
HCG11-201ENST00000411553 CHRNA3P32297 505 aa19.48■□□□□ 0.71
HCG11-201ENST00000411553 YAF2Q8IY57 180 aa19.48■□□□□ 0.71
HCG11-201ENST00000411553 DDX50Q9BQ39 737 aaKnown RBP19.48■□□□□ 0.71
HCG11-201ENST00000411553 AFF4Q9UHB7 1163 aaKnown RBP19.48■□□□□ 0.71
HCG11-201ENST00000411553 UBA6A0AVT1 1052 aaPredicted RBP19.48■□□□□ 0.71
HCG11-201ENST00000411553 TNPO2O14787 897 aaKnown RBP19.48■□□□□ 0.71
HCG11-201ENST00000411553 FAM47EQ6ZV65 393 aa19.48■□□□□ 0.71
HCG11-201ENST00000411553 NUDT18Q6ZVK8 323 aa19.48■□□□□ 0.71
HCG11-201ENST00000411553 GUF1Q8N442 669 aaKnown RBP19.48■□□□□ 0.71
HCG11-201ENST00000411553 OR6P1Q8NGX9 317 aa19.48■□□□□ 0.71
HCG11-201ENST00000411553 SLC26A7Q8TE54 656 aa19.48■□□□□ 0.71
HCG11-201ENST00000411553 RAPGEF5Q92565 580 aa19.48■□□□□ 0.71
HCG11-201ENST00000411553 BPIFA3Q9BQP9 254 aa19.48■□□□□ 0.71
HCG11-201ENST00000411553 TRPV6Q9H1D0 765 aa19.48■□□□□ 0.71
HCG11-201ENST00000411553 LMNAP02545 664 aaKnown RBP19.48■□□□□ 0.71
HCG11-201ENST00000411553 ARHGAP31Q2M1Z3 1444 aa19.48■□□□□ 0.71
HCG11-201ENST00000411553 CC2D1AQ6P1N0 951 aaPredicted RBP19.48■□□□□ 0.71
HCG11-201ENST00000411553 NEDD1Q8NHV4 660 aa19.48■□□□□ 0.71
HCG11-201ENST00000411553 PBXIP1Q96AQ6 731 aa19.48■□□□□ 0.71
HCG11-201ENST00000411553 PRR29P0C7W0 189 aa19.48■□□□□ 0.71
HCG11-201ENST00000411553 CDK17Q00537 523 aa19.48■□□□□ 0.71
HCG11-201ENST00000411553 HAUS6Q7Z4H7 955 aa19.48■□□□□ 0.71
HCG11-201ENST00000411553 TBC1D1Q86TI0 1168 aaPredicted RBP19.48■□□□□ 0.71
HCG11-201ENST00000411553 OR6J1Q8NGC5 347 aa19.48■□□□□ 0.71
HCG11-201ENST00000411553 PARVAQ9NVD7 372 aa19.48■□□□□ 0.71
HCG11-201ENST00000411553 EMSYQ7Z589 1322 aa19.47■□□□□ 0.71
HCG11-201ENST00000411553 ORC4O43929 436 aa19.47■□□□□ 0.71
HCG11-201ENST00000411553 KRT14P02533 472 aa19.47■□□□□ 0.71
HCG11-201ENST00000411553 HMGCS2P54868 508 aa19.47■□□□□ 0.71
HCG11-201ENST00000411553 JPH1Q9HDC5 661 aaPredicted RBP19.47■□□□□ 0.71
HCG11-201ENST00000411553 CCDC195A0A1B0GUA6 201 aa19.47■□□□□ 0.71
HCG11-201ENST00000411553 GSG1L2A8MUP6 293 aa19.47■□□□□ 0.71
HCG11-201ENST00000411553 PDIA2Q13087 525 aaKnown RBP19.47■□□□□ 0.71
HCG11-201ENST00000411553 GOLPH3LQ9H4A5 285 aa19.47■□□□□ 0.71
HCG11-201ENST00000411553 TJP2Q9UDY2 1190 aa19.47■□□□□ 0.71
HCG11-201ENST00000411553 ZFP69BQ9UJL9 534 aa19.47■□□□□ 0.71
HCG11-201ENST00000411553 ZNF189O75820 626 aaPredicted RBP19.47■□□□□ 0.71
HCG11-201ENST00000411553 TXNP10599 105 aaKnown RBP19.47■□□□□ 0.71
HCG11-201ENST00000411553 LCP1P13796 627 aa19.47■□□□□ 0.71
HCG11-201ENST00000411553 AKR1B1P15121 316 aa19.47■□□□□ 0.71
HCG11-201ENST00000411553 SKIV2LQ15477 1246 aaKnown RBP19.47■□□□□ 0.71
HCG11-201ENST00000411553 RAET1EQ8TD07 263 aa19.47■□□□□ 0.71
HCG11-201ENST00000411553 SAMD9LQ8IVG5 1584 aa19.47■□□□□ 0.71
HCG11-201ENST00000411553 FAM95CA0A1B0GW59 222 aa19.47■□□□□ 0.71
HCG11-201ENST00000411553 GRID2IPA4D2P6 1211 aa19.47■□□□□ 0.71
HCG11-201ENST00000411553 DFFAO00273 331 aa19.47■□□□□ 0.71
HCG11-201ENST00000411553 DNAJC6O75061 913 aa19.47■□□□□ 0.71
HCG11-201ENST00000411553 TEDDM1Q5T9Z0 273 aa19.47■□□□□ 0.71
HCG11-201ENST00000411553 RNF149Q8NC42 400 aa19.47■□□□□ 0.71
HCG11-201ENST00000411553 RMDN1Q96DB5 314 aa19.47■□□□□ 0.71
HCG11-201ENST00000411553 KIF1BO60333 1816 aa19.47■□□□□ 0.71
HCG11-201ENST00000411553 STAT5BP51692 787 aa19.47■□□□□ 0.71
HCG11-201ENST00000411553 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.47■□□□□ 0.71
HCG11-201ENST00000411553 THEMIS2Q5TEJ8 643 aa19.46■□□□□ 0.71
HCG11-201ENST00000411553 TRAPPC3O43617 180 aa19.46■□□□□ 0.71
HCG11-201ENST00000411553 ST13P4Q8IZP2 240 aaPredicted RBP19.46■□□□□ 0.71
HCG11-201ENST00000411553 NEUROG2Q9H2A3 272 aa19.46■□□□□ 0.71
HCG11-201ENST00000411553 TUFT1Q9NNX1 390 aa19.46■□□□□ 0.71
HCG11-201ENST00000411553 PIN4Q9Y237 131 aaKnown RBP19.46■□□□□ 0.71
HCG11-201ENST00000411553 ATP5HO75947 161 aa19.46■□□□□ 0.71
HCG11-201ENST00000411553 PRKCBP05771 671 aa19.46■□□□□ 0.71
HCG11-201ENST00000411553 TRIM49P0CI25 452 aa19.46■□□□□ 0.71
HCG11-201ENST00000411553 TRIM49CP0CI26 452 aa19.46■□□□□ 0.71
HCG11-201ENST00000411553 YWHABP31946 246 aaKnown RBP19.46■□□□□ 0.71
HCG11-201ENST00000411553 CDH6P55285 790 aa19.46■□□□□ 0.71
HCG11-201ENST00000411553 EFTUD2Q15029 972 aaKnown RBP eCLIP19.46■□□□□ 0.71
HCG11-201ENST00000411553 ZBED8Q8IZ13 594 aa19.46■□□□□ 0.71
HCG11-201ENST00000411553 SNF8Q96H20 258 aa19.46■□□□□ 0.71
HCG11-201ENST00000411553 FAM84BQ96KN1 310 aaPredicted RBP19.46■□□□□ 0.71
HCG11-201ENST00000411553 ISCA1Q9BUE6 129 aa19.46■□□□□ 0.71
HCG11-201ENST00000411553 COG4Q9H9E3 785 aa19.46■□□□□ 0.71
HCG11-201ENST00000411553 PP2D1A8MPX8 630 aa19.46■□□□□ 0.71
HCG11-201ENST00000411553 EYA4O95677 639 aa19.46■□□□□ 0.71
HCG11-201ENST00000411553 RBBP7Q16576 425 aa19.46■□□□□ 0.71
HCG11-201ENST00000411553 FMR1NBQ8N0W7 255 aaPredicted RBP19.46■□□□□ 0.71
HCG11-201ENST00000411553 TEKT4Q8WW24 435 aa19.46■□□□□ 0.71
HCG11-201ENST00000411553 ZNF197O14709 1029 aa19.45■□□□□ 0.7
HCG11-201ENST00000411553 APOL1O14791 398 aa19.45■□□□□ 0.7
HCG11-201ENST00000411553 SPATA2LQ8IUW3 424 aaPredicted RBP19.45■□□□□ 0.7
HCG11-201ENST00000411553 MTBPQ96DY7 904 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms