RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 HAPLN2Q9GZV7 340 aa-0.77□□□□□ -2.53
RNU4-88P-201ENST00000411220 ZNF446Q9NWS9 450 aa-0.77□□□□□ -2.53
RNU4-88P-201ENST00000411220 ADAM21Q9UKJ8 722 aa-0.77□□□□□ -2.53
RNU4-88P-201ENST00000411220 TBC1D2BQ9UPU7 963 aa-0.77□□□□□ -2.53
RNU4-88P-201ENST00000411220 ZNF652Q9Y2D9 606 aa-0.77□□□□□ -2.53
RNU4-88P-201ENST00000411220 FPGT-TNNI3KV9GXZ4 949 aa-0.77□□□□□ -2.53
RNU4-88P-201ENST00000411220 COL1A2P08123 1366 aa-0.78□□□□□ -2.53
RNU4-88P-201ENST00000411220 SOS1Q07889 1333 aaPredicted RBP-0.78□□□□□ -2.53
RNU4-88P-201ENST00000411220 KIR2DL5BA0A0G2JN68 375 aa-0.78□□□□□ -2.53
RNU4-88P-201ENST00000411220 KIR2DL5BA0A0G2JPC4 375 aa-0.78□□□□□ -2.53
RNU4-88P-201ENST00000411220 MYO1FO00160 1098 aa-0.78□□□□□ -2.53
RNU4-88P-201ENST00000411220 FOSP01100 380 aaPredicted RBP-0.78□□□□□ -2.53
RNU4-88P-201ENST00000411220 IGLV2-11P01706 119 aa-0.78□□□□□ -2.53
RNU4-88P-201ENST00000411220 HOXD3P31249 432 aaPredicted RBP-0.78□□□□□ -2.53
RNU4-88P-201ENST00000411220 APOBEC3AP31941 199 aaPredicted RBP-0.78□□□□□ -2.53
RNU4-88P-201ENST00000411220 NOP2P46087 812 aaKnown RBP-0.78□□□□□ -2.53
RNU4-88P-201ENST00000411220 ENTPD1P49961 510 aa-0.78□□□□□ -2.53
RNU4-88P-201ENST00000411220 TAF1CQ15572 869 aaPredicted RBP-0.78□□□□□ -2.53
RNU4-88P-201ENST00000411220 KIZQ2M2Z5 673 aa-0.78□□□□□ -2.53
RNU4-88P-201ENST00000411220 NBPF12Q5TAG4 269 aaPredicted RBP-0.78□□□□□ -2.53
RNU4-88P-201ENST00000411220 KIR2DL5AQ8N109 375 aa-0.78□□□□□ -2.53
RNU4-88P-201ENST00000411220 GALNT16Q8N428 558 aa-0.78□□□□□ -2.53
RNU4-88P-201ENST00000411220 AMER3Q8N944 861 aa-0.78□□□□□ -2.53
RNU4-88P-201ENST00000411220 CDX2Q99626 313 aaPredicted RBP-0.78□□□□□ -2.53
RNU4-88P-201ENST00000411220 SPAG8Q99932 426 aaPredicted RBP-0.78□□□□□ -2.53
RNU4-88P-201ENST00000411220 TCF25Q9BQ70 676 aa-0.78□□□□□ -2.53
RNU4-88P-201ENST00000411220 SMURF1Q9HCE7 757 aa-0.78□□□□□ -2.53
RNU4-88P-201ENST00000411220 FAM184BQ9ULE4 1060 aa-0.78□□□□□ -2.53
RNU4-88P-201ENST00000411220 PADI4Q9UM07 663 aa-0.78□□□□□ -2.53
RNU4-88P-201ENST00000411220 CELA1Q9UNI1 258 aa-0.78□□□□□ -2.53
RNU4-88P-201ENST00000411220 CHST2Q9Y4C5 530 aa-0.78□□□□□ -2.53
RNU4-88P-201ENST00000411220 TPRP12270 2363 aaKnown RBP-0.78□□□□□ -2.53
RNU4-88P-201ENST00000411220 DSPP15924 2871 aaKnown RBP-0.78□□□□□ -2.54
RNU4-88P-201ENST00000411220 DNHD1Q96M86 4753 aa-0.79□□□□□ -2.54
RNU4-88P-201ENST00000411220 LAMA2P24043 3122 aaKnown RBP-0.79□□□□□ -2.54
RNU4-88P-201ENST00000411220 TCRBV5S2A0A599 114 aa-0.79□□□□□ -2.54
RNU4-88P-201ENST00000411220 PCDH17O14917 1159 aa-0.79□□□□□ -2.54
RNU4-88P-201ENST00000411220 PAGE1O75459 146 aa-0.79□□□□□ -2.54
RNU4-88P-201ENST00000411220 ALDH2P05091 517 aa-0.79□□□□□ -2.54
RNU4-88P-201ENST00000411220 XRCC5P13010 732 aaKnown RBP-0.79□□□□□ -2.54
RNU4-88P-201ENST00000411220 CD99P14209 185 aa-0.79□□□□□ -2.54
RNU4-88P-201ENST00000411220 IL2RBP14784 551 aa-0.79□□□□□ -2.54
RNU4-88P-201ENST00000411220 ARSAP15289 507 aa-0.79□□□□□ -2.54
RNU4-88P-201ENST00000411220 GNAT2P19087 354 aa-0.79□□□□□ -2.54
RNU4-88P-201ENST00000411220 CDC25AP30304 524 aa-0.79□□□□□ -2.54
RNU4-88P-201ENST00000411220 FCGRTP55899 365 aa-0.79□□□□□ -2.54
RNU4-88P-201ENST00000411220 MXRA7P84157 204 aa-0.79□□□□□ -2.54
RNU4-88P-201ENST00000411220 SF1Q15637 639 aaKnown RBP-0.79□□□□□ -2.54
RNU4-88P-201ENST00000411220 WASHC4Q2M389 1173 aa-0.79□□□□□ -2.54
RNU4-88P-201ENST00000411220 TRIM68Q6AZZ1 485 aa-0.79□□□□□ -2.54
RNU4-88P-201ENST00000411220 ARMC6Q6NXE6 501 aa-0.79□□□□□ -2.54
RNU4-88P-201ENST00000411220 LBX2Q6XYB7 198 aa-0.79□□□□□ -2.54
RNU4-88P-201ENST00000411220 TMC7Q7Z402 723 aa-0.79□□□□□ -2.54
RNU4-88P-201ENST00000411220 ADIPOR2Q86V24 386 aa-0.79□□□□□ -2.54
RNU4-88P-201ENST00000411220 RTKN2Q8IZC4 609 aa-0.79□□□□□ -2.54
RNU4-88P-201ENST00000411220 BCL6BQ8N143 479 aaPredicted RBP-0.79□□□□□ -2.54
RNU4-88P-201ENST00000411220 GAL3ST3Q96A11 431 aa-0.79□□□□□ -2.54
RNU4-88P-201ENST00000411220 AIFM2Q9BRQ8 373 aa-0.79□□□□□ -2.54
RNU4-88P-201ENST00000411220 NDC1Q9BTX1 674 aa-0.79□□□□□ -2.54
RNU4-88P-201ENST00000411220 ARHGAP39Q9C0H5 1083 aa-0.79□□□□□ -2.54
RNU4-88P-201ENST00000411220 TNMDQ9H2S6 317 aa-0.79□□□□□ -2.54
RNU4-88P-201ENST00000411220 SDF2L1Q9HCN8 221 aa-0.79□□□□□ -2.54
RNU4-88P-201ENST00000411220 NPHS2Q9NP85 383 aa-0.79□□□□□ -2.54
RNU4-88P-201ENST00000411220 CASS4Q9NQ75 786 aa-0.79□□□□□ -2.54
RNU4-88P-201ENST00000411220 PDGFCQ9NRA1 345 aa-0.79□□□□□ -2.54
RNU4-88P-201ENST00000411220 DIAPH3Q9NSV4 1193 aa-0.79□□□□□ -2.54
RNU4-88P-201ENST00000411220 ZNF292O60281 2723 aa-0.79□□□□□ -2.54
RNU4-88P-201ENST00000411220 FLNAP21333 2647 aaKnown RBP-0.79□□□□□ -2.54
RNU4-88P-201ENST00000411220 LPAP08519 4548 aa-0.79□□□□□ -2.54
RNU4-88P-201ENST00000411220 BIRC6Q9NR09 4857 aa-0.8□□□□□ -2.54
RNU4-88P-201ENST00000411220 UBE2QL1A1L167 161 aa-0.8□□□□□ -2.54
RNU4-88P-201ENST00000411220 CCDC151A5D8V7 595 aa-0.8□□□□□ -2.54
RNU4-88P-201ENST00000411220 BCAR3O75815 825 aa-0.8□□□□□ -2.54
RNU4-88P-201ENST00000411220 PAPSS2O95340 614 aaPredicted RBP-0.8□□□□□ -2.54
RNU4-88P-201ENST00000411220 KRT3P12035 628 aa-0.8□□□□□ -2.54
RNU4-88P-201ENST00000411220 CEBPBP17676 345 aa-0.8□□□□□ -2.54
RNU4-88P-201ENST00000411220 GBP1P32455 592 aa-0.8□□□□□ -2.54
RNU4-88P-201ENST00000411220 STAT3P40763 770 aa-0.8□□□□□ -2.54
RNU4-88P-201ENST00000411220 DLX5P56178 289 aa-0.8□□□□□ -2.54
RNU4-88P-201ENST00000411220 EIF4HQ15056 248 aaKnown RBP-0.8□□□□□ -2.54
RNU4-88P-201ENST00000411220 ZYXQ15942 572 aaKnown RBP-0.8□□□□□ -2.54
RNU4-88P-201ENST00000411220 IZUMO4Q1ZYL8 232 aa-0.8□□□□□ -2.54
RNU4-88P-201ENST00000411220 INF2Q27J81 1249 aa-0.8□□□□□ -2.54
RNU4-88P-201ENST00000411220 DSTYKQ6XUX3 929 aa-0.8□□□□□ -2.54
RNU4-88P-201ENST00000411220 COLCA1Q6ZS62 124 aa-0.8□□□□□ -2.54
RNU4-88P-201ENST00000411220 KRTAP19-3Q7Z4W3 81 aa-0.8□□□□□ -2.54
RNU4-88P-201ENST00000411220 ARHGAP22Q7Z5H3 698 aa-0.8□□□□□ -2.54
RNU4-88P-201ENST00000411220 PARP8Q8N3A8 854 aa-0.8□□□□□ -2.54
RNU4-88P-201ENST00000411220 MSL3Q8N5Y2 521 aaKnown RBP-0.8□□□□□ -2.54
RNU4-88P-201ENST00000411220 IQCF1Q8N6M8 205 aa-0.8□□□□□ -2.54
RNU4-88P-201ENST00000411220 ADAMTS14Q8WXS8 1223 aa-0.8□□□□□ -2.54
RNU4-88P-201ENST00000411220 NEUROG1Q92886 237 aa-0.8□□□□□ -2.54
RNU4-88P-201ENST00000411220 DSCC1Q9BVC3 393 aa-0.8□□□□□ -2.54
RNU4-88P-201ENST00000411220 FZD8Q9H461 694 aa-0.8□□□□□ -2.54
RNU4-88P-201ENST00000411220 MARCH2Q9P0N8 246 aa-0.8□□□□□ -2.54
RNU4-88P-201ENST00000411220 MAGED2Q9UNF1 606 aaPredicted RBP-0.8□□□□□ -2.54
RNU4-88P-201ENST00000411220 GAB2Q9UQC2 676 aa-0.8□□□□□ -2.54
RNU4-88P-201ENST00000411220 PCDHGB1Q9Y5G3 927 aa-0.8□□□□□ -2.54
RNU4-88P-201ENST00000411220 ABCA2Q9BZC7 2435 aa-0.8□□□□□ -2.54
RNU4-88P-201ENST00000411220 PRAMEF22A3QJZ6 481 aa-0.81□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms