RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 OSBPL10Q9BXB5 764 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 LATS2Q9NRM7 1088 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 CFAP43Q8NDM7 1665 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 TRIM49BA6NDI0 452 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 PDAP1Q13442 181 aaKnown RBP8.92□□□□□ -0.98
SCN9A-203ENST00000409672 EFHC2Q5JST6 749 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 ERAP2Q6P179 960 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 TOGARAM2Q6ZUX3 1019 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 SFR1Q86XK3 245 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 ANKMY2Q8IV38 441 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 KAT2BQ92831 832 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 LXNQ9BS40 222 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 ZFYVE1Q9HBF4 777 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 WARS2Q9UGM6 360 aaKnown RBP8.92□□□□□ -0.98
SCN9A-203ENST00000409672 DTNAQ9Y4J8 743 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 TPI1P60174 286 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 SREBF2Q12772 1141 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 KLHL29Q96CT2 875 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 PDE11AQ9HCR9 933 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 LDHAP00338 332 aaKnown RBP8.92□□□□□ -0.98
SCN9A-203ENST00000409672 RGS9BPQ6ZS82 235 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 CENPUQ71F23 418 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 DCTN4Q9UJW0 460 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 PACSIN2Q9UNF0 486 aaPredicted RBP8.92□□□□□ -0.98
SCN9A-203ENST00000409672 ORC4O43929 436 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 GRIN3BO60391 1043 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 GPS1Q13098 491 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 BZW1Q7L1Q6 419 aaKnown RBP8.91□□□□□ -0.98
SCN9A-203ENST00000409672 WDR75Q8IWA0 830 aaKnown RBP8.91□□□□□ -0.98
SCN9A-203ENST00000409672 FOPNLQ96NB1 174 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 TRIM45Q9H8W5 580 aaPredicted RBP8.91□□□□□ -0.98
SCN9A-203ENST00000409672 CYP27B1O15528 508 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 HMOX2P30519 316 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 PATL1Q86TB9 770 aaKnown RBP8.91□□□□□ -0.98
SCN9A-203ENST00000409672 MB21D1Q8N884 522 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 SLC30A5Q8TAD4 765 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 CLMNQ96JQ2 1002 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 FAM49BQ9NUQ9 324 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 DNAJC12Q9UKB3 198 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 AGAP1Q9UPQ3 857 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 SUN1O94901 812 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 ITGA4P13612 1032 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 RALGDSQ12967 914 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 ZRANB3Q5FWF4 1079 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 APPL2Q8NEU8 664 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 CCHCR1Q8TD31 782 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 HES6Q96HZ4 224 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 NUP85Q9BW27 656 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 BSDC1Q9NW68 430 aaPredicted RBP8.91□□□□□ -0.98
SCN9A-203ENST00000409672 KCNN4O15554 427 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 PCDH8O95206 1070 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 EGFRP00533 1210 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 FKBP3Q00688 224 aaKnown RBP8.91□□□□□ -0.98
SCN9A-203ENST00000409672 RNF180Q86T96 592 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 UBA3Q8TBC4 463 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 SPATA18Q8TC71 538 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 PPARGC1AQ9UBK2 798 aaKnown RBP8.91□□□□□ -0.98
SCN9A-203ENST00000409672 F5H6K3 240 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 HSPA1AP0DMV8 641 aaKnown RBP8.91□□□□□ -0.98
SCN9A-203ENST00000409672 HSPA1BP0DMV9 641 aaKnown RBP8.91□□□□□ -0.98
SCN9A-203ENST00000409672 SESN2P58004 480 aaPredicted RBP8.91□□□□□ -0.98
SCN9A-203ENST00000409672 NCALDP61601 193 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 DR1Q01658 176 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 KLRC3Q07444 240 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 ORC1Q13415 861 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 MAN2A1Q16706 1144 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 MIER2Q8N344 545 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 EFHD1Q9BUP0 239 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 FBXO10Q9UK96 956 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 UNC13AQ9UPW8 1703 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 MYO1GB0I1T2 1018 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 IPO5O00410 1097 aaKnown RBP8.91□□□□□ -0.98
SCN9A-203ENST00000409672 PFKFB2O60825 505 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 ARHGAP25P42331 645 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 MCAMP43121 646 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 VAMP7P51809 220 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 GFPT1Q06210 699 aaPredicted RBP8.91□□□□□ -0.98
SCN9A-203ENST00000409672 KRT72Q14CN4 511 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 EXO5Q9H790 373 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 MAD2L2Q9UI95 211 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 ABCC10Q5T3U5 1492 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 GOLGA8KD6RF30 607 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 FGFR1P11362 822 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 ESRRAP11474 423 aaPredicted RBP8.91□□□□□ -0.98
SCN9A-203ENST00000409672 EFTUD2Q15029 972 aaKnown RBP eCLIP8.91□□□□□ -0.98
SCN9A-203ENST00000409672 ARHGAP15Q53QZ3 475 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 IER5Q5VY09 327 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 LRRC8AQ8IWT6 810 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 RASEFQ8IZ41 740 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 KDM4CQ9H3R0 1056 aa8.91□□□□□ -0.98
SCN9A-203ENST00000409672 PBRM1Q86U86 1689 aa8.9□□□□□ -0.98
SCN9A-203ENST00000409672 AARSP49588 968 aaKnown RBP eCLIP8.9□□□□□ -0.98
SCN9A-203ENST00000409672 LRRC8EQ6NSJ5 796 aa8.9□□□□□ -0.98
SCN9A-203ENST00000409672 STKLD1Q8NE28 680 aa8.9□□□□□ -0.98
SCN9A-203ENST00000409672 DDX50Q9BQ39 737 aaKnown RBP8.9□□□□□ -0.98
SCN9A-203ENST00000409672 SPZ1Q9BXG8 430 aa8.9□□□□□ -0.98
SCN9A-203ENST00000409672 GPR63Q9BZJ6 419 aa8.9□□□□□ -0.98
SCN9A-203ENST00000409672 STX18Q9P2W9 335 aaKnown RBP8.9□□□□□ -0.98
SCN9A-203ENST00000409672 COPEO14579 308 aa8.9□□□□□ -0.98
SCN9A-203ENST00000409672 MMP1P03956 469 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms