RNA–Protein interactions for RNA: ENST00000409483.5

PTPRN2-205, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN2, Length 4,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-205ENST00000409483 SNX25Q9H3E2 840 aa17.61■□□□□ 0.41
PTPRN2-205ENST00000409483 SLC38A10Q9HBR0 1119 aa17.61■□□□□ 0.41
PTPRN2-205ENST00000409483 HPCAL4Q9UM19 191 aa17.61■□□□□ 0.41
PTPRN2-205ENST00000409483 POLRMTO00411 1230 aaKnown RBP17.61■□□□□ 0.41
PTPRN2-205ENST00000409483 AKAP3O75969 853 aa17.61■□□□□ 0.41
PTPRN2-205ENST00000409483 PLS3P13797 630 aa17.61■□□□□ 0.41
PTPRN2-205ENST00000409483 EIF3BP55884 814 aaKnown RBP17.61■□□□□ 0.41
PTPRN2-205ENST00000409483 TBC1D1Q86TI0 1168 aaPredicted RBP17.61■□□□□ 0.41
PTPRN2-205ENST00000409483 ZKSCAN4Q969J2 545 aaPredicted RBP17.61■□□□□ 0.41
PTPRN2-205ENST00000409483 MYCP01106 439 aaPredicted RBP17.61■□□□□ 0.41
PTPRN2-205ENST00000409483 KCTD19Q17RG1 926 aaPredicted RBP17.61■□□□□ 0.41
PTPRN2-205ENST00000409483 C6orf118Q5T5N4 469 aa17.61■□□□□ 0.41
PTPRN2-205ENST00000409483 GGT7Q9UJ14 662 aa17.61■□□□□ 0.41
PTPRN2-205ENST00000409483 SCINQ9Y6U3 715 aa17.61■□□□□ 0.41
PTPRN2-205ENST00000409483 SLC12A2P55011 1212 aa17.6■□□□□ 0.41
PTPRN2-205ENST00000409483 COG2Q14746 738 aa17.6■□□□□ 0.41
PTPRN2-205ENST00000409483 AGPAT3Q9NRZ7 376 aa17.6■□□□□ 0.41
PTPRN2-205ENST00000409483 ODF2LQ9ULJ1 636 aa17.6■□□□□ 0.41
PTPRN2-205ENST00000409483 GRID2IPA4D2P6 1211 aa17.6■□□□□ 0.41
PTPRN2-205ENST00000409483 DDR1Q08345 913 aa17.6■□□□□ 0.41
PTPRN2-205ENST00000409483 GIT2Q14161 759 aa17.6■□□□□ 0.41
PTPRN2-205ENST00000409483 NT5DC1Q5TFE4 455 aa17.6■□□□□ 0.41
PTPRN2-205ENST00000409483 ARHGEF18Q6ZSZ5 1173 aa17.6■□□□□ 0.41
PTPRN2-205ENST00000409483 SPATS2Q86XZ4 545 aaKnown RBP17.6■□□□□ 0.41
PTPRN2-205ENST00000409483 ATP6V1G3Q96LB4 118 aa17.6■□□□□ 0.41
PTPRN2-205ENST00000409483 CFAP57Q96MR6 1250 aa17.6■□□□□ 0.41
PTPRN2-205ENST00000409483 NAGPAQ9UK23 515 aa17.6■□□□□ 0.41
PTPRN2-205ENST00000409483 RASA4BC9J798 803 aa17.6■□□□□ 0.41
PTPRN2-205ENST00000409483 TXNDC9O14530 226 aa17.6■□□□□ 0.41
PTPRN2-205ENST00000409483 RASA4O43374 803 aa17.6■□□□□ 0.41
PTPRN2-205ENST00000409483 MED7O43513 233 aa17.6■□□□□ 0.41
PTPRN2-205ENST00000409483 PDIK1LQ8N165 341 aa17.6■□□□□ 0.41
PTPRN2-205ENST00000409483 DCLK2Q8N568 766 aa17.6■□□□□ 0.41
PTPRN2-205ENST00000409483 FAM81BQ96LP2 452 aa17.6■□□□□ 0.41
PTPRN2-205ENST00000409483 CBWD1Q9BRT8 395 aa17.6■□□□□ 0.41
PTPRN2-205ENST00000409483 MIS12Q9H081 205 aa17.6■□□□□ 0.41
PTPRN2-205ENST00000409483 SLC5A4Q9NY91 659 aa17.6■□□□□ 0.41
PTPRN2-205ENST00000409483 A0A1W2PQJ5 194 aa17.6■□□□□ 0.41
PTPRN2-205ENST00000409483 MT-ND3P03897 115 aa17.6■□□□□ 0.41
PTPRN2-205ENST00000409483 IL17AQ16552 155 aa17.6■□□□□ 0.41
PTPRN2-205ENST00000409483 NXNQ6DKJ4 435 aa17.6■□□□□ 0.41
PTPRN2-205ENST00000409483 DEFB132Q7Z7B7 95 aa17.6■□□□□ 0.41
PTPRN2-205ENST00000409483 DNAAF3Q8N9W5 541 aa17.6■□□□□ 0.41
PTPRN2-205ENST00000409483 BTBD6Q96KE9 485 aa17.6■□□□□ 0.41
PTPRN2-205ENST00000409483 DEFB129Q9H1M3 183 aa17.6■□□□□ 0.41
PTPRN2-205ENST00000409483 PITPNM2Q9BZ72 1349 aa17.59■□□□□ 0.41
PTPRN2-205ENST00000409483 A0A1B0GUA9 196 aa17.59■□□□□ 0.41
PTPRN2-205ENST00000409483 FOXN3O00409 490 aaPredicted RBP17.59■□□□□ 0.41
PTPRN2-205ENST00000409483 TRIM66O15016 1216 aa17.59■□□□□ 0.41
PTPRN2-205ENST00000409483 SLC16A3O15427 465 aaKnown RBP17.59■□□□□ 0.41
PTPRN2-205ENST00000409483 CPP00450 1065 aa17.59■□□□□ 0.41
PTPRN2-205ENST00000409483 IL1R1P14778 569 aa17.59■□□□□ 0.41
PTPRN2-205ENST00000409483 PON1P27169 355 aa17.59■□□□□ 0.41
PTPRN2-205ENST00000409483 GABPAQ06546 454 aa17.59■□□□□ 0.41
PTPRN2-205ENST00000409483 ADCY2Q08462 1091 aa17.59■□□□□ 0.41
PTPRN2-205ENST00000409483 MICAL1Q8TDZ2 1067 aa17.59■□□□□ 0.41
PTPRN2-205ENST00000409483 ZDHHC15Q96MV8 337 aa17.59■□□□□ 0.41
PTPRN2-205ENST00000409483 NFIBO00712 420 aa17.59■□□□□ 0.41
PTPRN2-205ENST00000409483 BAG2O95816 211 aa17.59■□□□□ 0.41
PTPRN2-205ENST00000409483 PSMC1P62191 440 aaKnown RBP17.59■□□□□ 0.41
PTPRN2-205ENST00000409483 NBPF9Q3BBW0 867 aa17.59■□□□□ 0.41
PTPRN2-205ENST00000409483 TRAPPC11Q7Z392 1133 aa17.59■□□□□ 0.41
PTPRN2-205ENST00000409483 SCYL3Q8IZE3 742 aa17.59■□□□□ 0.41
PTPRN2-205ENST00000409483 SPATA33Q96N06 139 aa17.59■□□□□ 0.41
PTPRN2-205ENST00000409483 SPC25Q9HBM1 224 aa17.59■□□□□ 0.41
PTPRN2-205ENST00000409483 ALG6Q9Y672 507 aa17.59■□□□□ 0.41
PTPRN2-205ENST00000409483 TMEM150BA6NC51 233 aa17.59■□□□□ 0.41
PTPRN2-205ENST00000409483 WDR46O15213 610 aaKnown RBP17.59■□□□□ 0.41
PTPRN2-205ENST00000409483 GGPS1O95749 300 aa17.59■□□□□ 0.41
PTPRN2-205ENST00000409483 ZBED1O96006 694 aa17.59■□□□□ 0.41
PTPRN2-205ENST00000409483 CYP2C19P33261 490 aa17.59■□□□□ 0.41
PTPRN2-205ENST00000409483 GPS1Q13098 491 aa17.59■□□□□ 0.41
PTPRN2-205ENST00000409483 WDR72Q3MJ13 1102 aa17.59■□□□□ 0.41
PTPRN2-205ENST00000409483 HACE1Q8IYU2 909 aa17.59■□□□□ 0.41
PTPRN2-205ENST00000409483 THAP2Q9H0W7 228 aa17.59■□□□□ 0.41
PTPRN2-205ENST00000409483 CNOT10Q9H9A5 744 aaKnown RBP17.59■□□□□ 0.41
PTPRN2-205ENST00000409483 UBE4BO95155 1302 aa17.59■□□□□ 0.41
PTPRN2-205ENST00000409483 LRRIQ3A6PVS8 624 aaPredicted RBP17.59■□□□□ 0.41
PTPRN2-205ENST00000409483 CRCPO75575 148 aa17.59■□□□□ 0.41
PTPRN2-205ENST00000409483 STAT5BP51692 787 aa17.59■□□□□ 0.41
PTPRN2-205ENST00000409483 SOX10P56693 466 aa17.59■□□□□ 0.41
PTPRN2-205ENST00000409483 ZIM3Q96PE6 472 aa17.59■□□□□ 0.41
PTPRN2-205ENST00000409483 POP1Q99575 1024 aaKnown RBP17.59■□□□□ 0.41
PTPRN2-205ENST00000409483 TEX13BQ9BXU2 312 aa17.59■□□□□ 0.41
PTPRN2-205ENST00000409483 BLOC1S4Q9NUP1 217 aa17.59■□□□□ 0.41
PTPRN2-205ENST00000409483 TJP3O95049 919 aa17.58■□□□□ 0.41
PTPRN2-205ENST00000409483 COMTP21964 271 aa17.58■□□□□ 0.41
PTPRN2-205ENST00000409483 RSRC2Q7L4I2 434 aaKnown RBP17.58■□□□□ 0.41
PTPRN2-205ENST00000409483 SCYL1Q96KG9 808 aa17.58■□□□□ 0.41
PTPRN2-205ENST00000409483 TMEM117Q9H0C3 514 aa17.58■□□□□ 0.41
PTPRN2-205ENST00000409483 ELP3Q9H9T3 547 aa17.58■□□□□ 0.41
PTPRN2-205ENST00000409483 LRRC4Q9HBW1 653 aa17.58■□□□□ 0.41
PTPRN2-205ENST00000409483 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.58■□□□□ 0.41
PTPRN2-205ENST00000409483 SPATA31A6Q5VVP1 1343 aa17.58■□□□□ 0.41
PTPRN2-205ENST00000409483 CHRNA3P32297 505 aa17.58■□□□□ 0.4
PTPRN2-205ENST00000409483 PPP2R2AP63151 447 aa17.58■□□□□ 0.4
PTPRN2-205ENST00000409483 MYO1EQ12965 1108 aa17.58■□□□□ 0.4
PTPRN2-205ENST00000409483 TBX2Q13207 712 aaPredicted RBP17.58■□□□□ 0.4
PTPRN2-205ENST00000409483 CBWD2Q8IUF1 395 aa17.58■□□□□ 0.4
PTPRN2-205ENST00000409483 LRRC71Q8N4P6 559 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms