RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 NRDE2Q9H7Z3 1164 aa10.05□□□□□ -0.8
SNORD88A-201ENST00000408314 BARX2Q9UMQ3 279 aaPredicted RBP10.05□□□□□ -0.8
SNORD88A-201ENST00000408314 DNM3Q9UQ16 869 aa10.05□□□□□ -0.8
SNORD88A-201ENST00000408314 FAN1Q9Y2M0 1017 aa10.05□□□□□ -0.8
SNORD88A-201ENST00000408314 IPPQ9Y573 584 aa10.05□□□□□ -0.8
SNORD88A-201ENST00000408314 IRAK3Q9Y616 596 aa10.05□□□□□ -0.8
SNORD88A-201ENST00000408314 A0A1B0GUA9 196 aa10.04□□□□□ -0.8
SNORD88A-201ENST00000408314 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.04□□□□□ -0.8
SNORD88A-201ENST00000408314 C19orf67A6NJJ6 358 aa10.04□□□□□ -0.8
SNORD88A-201ENST00000408314 PI4K2BG5E9Z4 385 aa10.04□□□□□ -0.8
SNORD88A-201ENST00000408314 SLC26A4O43511 780 aa10.04□□□□□ -0.8
SNORD88A-201ENST00000408314 URODP06132 367 aa10.04□□□□□ -0.8
SNORD88A-201ENST00000408314 GALTP07902 379 aa10.04□□□□□ -0.8
SNORD88A-201ENST00000408314 CTSAP10619 480 aa10.04□□□□□ -0.8
SNORD88A-201ENST00000408314 ARF4P18085 180 aaPredicted RBP10.04□□□□□ -0.8
SNORD88A-201ENST00000408314 PDCP20941 246 aa10.04□□□□□ -0.8
SNORD88A-201ENST00000408314 GJB2P29033 226 aa10.04□□□□□ -0.8
SNORD88A-201ENST00000408314 GTF2F1P35269 517 aaKnown RBP eCLIP10.04□□□□□ -0.8
SNORD88A-201ENST00000408314 PBX3P40426 434 aa10.04□□□□□ -0.8
SNORD88A-201ENST00000408314 CREMQ03060 361 aa10.04□□□□□ -0.8
SNORD88A-201ENST00000408314 ITIH3Q06033 890 aa10.04□□□□□ -0.8
SNORD88A-201ENST00000408314 DLX2Q07687 328 aaPredicted RBP10.04□□□□□ -0.8
SNORD88A-201ENST00000408314 PRPF4BQ13523 1007 aaKnown RBP10.04□□□□□ -0.8
SNORD88A-201ENST00000408314 DCAF4L1Q3SXM0 396 aa10.04□□□□□ -0.8
SNORD88A-201ENST00000408314 UBXN11Q5T124 520 aa10.04□□□□□ -0.8
SNORD88A-201ENST00000408314 ARL6IP4Q66PJ3 421 aaKnown RBP10.04□□□□□ -0.8
SNORD88A-201ENST00000408314 ANKRD54Q6NXT1 300 aa10.04□□□□□ -0.8
SNORD88A-201ENST00000408314 AGMOQ6ZNB7 445 aa10.04□□□□□ -0.8
SNORD88A-201ENST00000408314 VPS52Q8N1B4 723 aa10.04□□□□□ -0.8
SNORD88A-201ENST00000408314 IGSF22Q8N9C0 903 aa10.04□□□□□ -0.8
SNORD88A-201ENST00000408314 CDK5RAP3Q96JB5 506 aa10.04□□□□□ -0.8
SNORD88A-201ENST00000408314 DRC1Q96MC2 740 aa10.04□□□□□ -0.8
SNORD88A-201ENST00000408314 COLEC11Q9BWP8 271 aa10.04□□□□□ -0.8
SNORD88A-201ENST00000408314 PHF7Q9BWX1 381 aaPredicted RBP10.04□□□□□ -0.8
SNORD88A-201ENST00000408314 BHMT2Q9H2M3 363 aa10.04□□□□□ -0.8
SNORD88A-201ENST00000408314 C17orf75Q9HAS0 396 aa10.04□□□□□ -0.8
SNORD88A-201ENST00000408314 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.04□□□□□ -0.8
SNORD88A-201ENST00000408314 DDX19AQ9NUU7 478 aaKnown RBP10.04□□□□□ -0.8
SNORD88A-201ENST00000408314 CLEC1BQ9P126 229 aa10.04□□□□□ -0.8
SNORD88A-201ENST00000408314 HCN4Q9Y3Q4 1203 aa10.04□□□□□ -0.8
SNORD88A-201ENST00000408314 USP15Q9Y4E8 981 aaPredicted RBP10.04□□□□□ -0.8
SNORD88A-201ENST00000408314 C2orf71A6NGG8 1288 aa10.03□□□□□ -0.8
SNORD88A-201ENST00000408314 ARL5CA6NH57 179 aa10.03□□□□□ -0.8
SNORD88A-201ENST00000408314 SPDYE4A6NLX3 237 aa10.03□□□□□ -0.8
SNORD88A-201ENST00000408314 NT5C1B-RDH14C9J2C7 533 aa10.03□□□□□ -0.8
SNORD88A-201ENST00000408314 ACKR2O00590 384 aa10.03□□□□□ -0.8
SNORD88A-201ENST00000408314 PER2O15055 1255 aa10.03□□□□□ -0.8
SNORD88A-201ENST00000408314 GPR37L1O60883 481 aa10.03□□□□□ -0.8
SNORD88A-201ENST00000408314 NPTXRO95502 500 aa10.03□□□□□ -0.8
SNORD88A-201ENST00000408314 CXCL14O95715 111 aa10.03□□□□□ -0.8
SNORD88A-201ENST00000408314 GLP2RO95838 553 aa10.03□□□□□ -0.8
SNORD88A-201ENST00000408314 POMCP01189 267 aa10.03□□□□□ -0.8
SNORD88A-201ENST00000408314 PRKCBP05771 671 aa10.03□□□□□ -0.8
SNORD88A-201ENST00000408314 MTHFRP42898 656 aa10.03□□□□□ -0.8
SNORD88A-201ENST00000408314 SLC11A1P49279 550 aa10.03□□□□□ -0.8
SNORD88A-201ENST00000408314 GRIK3Q13003 919 aa10.03□□□□□ -0.8
SNORD88A-201ENST00000408314 DMP1Q13316 513 aaPredicted RBP10.03□□□□□ -0.8
SNORD88A-201ENST00000408314 CBX2Q14781 532 aaPredicted RBP10.03□□□□□ -0.8
SNORD88A-201ENST00000408314 AMHR2Q16671 573 aa10.03□□□□□ -0.8
SNORD88A-201ENST00000408314 LONRF3Q496Y0 759 aa10.03□□□□□ -0.8
SNORD88A-201ENST00000408314 MAEAQ7L5Y9 396 aa10.03□□□□□ -0.8
SNORD88A-201ENST00000408314 BRAPQ7Z569 592 aa10.03□□□□□ -0.8
SNORD88A-201ENST00000408314 SMG8Q8ND04 991 aaKnown RBP10.03□□□□□ -0.8
SNORD88A-201ENST00000408314 AK8Q96MA6 479 aa10.03□□□□□ -0.8
SNORD88A-201ENST00000408314 RIPOR3Q96MK2 946 aa10.03□□□□□ -0.8
SNORD88A-201ENST00000408314 FZD8Q9H461 694 aa10.03□□□□□ -0.8
SNORD88A-201ENST00000408314 GPRC5CQ9NQ84 441 aa10.03□□□□□ -0.8
SNORD88A-201ENST00000408314 MRPL17Q9NRX2 175 aaKnown RBP10.03□□□□□ -0.8
SNORD88A-201ENST00000408314 KCND2Q9NZV8 630 aa10.03□□□□□ -0.8
SNORD88A-201ENST00000408314 KIAA1024Q9UPX6 916 aa10.03□□□□□ -0.8
SNORD88A-201ENST00000408314 NR2E1Q9Y466 385 aa10.03□□□□□ -0.8
SNORD88A-201ENST00000408314 PCDHB6Q9Y5E3 794 aa10.03□□□□□ -0.8
SNORD88A-201ENST00000408314 HCFC2Q9Y5Z7 792 aa10.03□□□□□ -0.8
SNORD88A-201ENST00000408314 MEIS3P2A8K0S8 358 aa10.02□□□□□ -0.81
SNORD88A-201ENST00000408314 HIDE1A8MVS5 230 aa10.02□□□□□ -0.81
SNORD88A-201ENST00000408314 H0YCG3 227 aa10.02□□□□□ -0.81
SNORD88A-201ENST00000408314 SOD2P04179 222 aa10.02□□□□□ -0.81
SNORD88A-201ENST00000408314 ADH1AP07327 375 aa10.02□□□□□ -0.81
SNORD88A-201ENST00000408314 COL9A1P20849 921 aa10.02□□□□□ -0.81
SNORD88A-201ENST00000408314 SCP2P22307 547 aa10.02□□□□□ -0.81
SNORD88A-201ENST00000408314 MLH1P40692 756 aa10.02□□□□□ -0.81
SNORD88A-201ENST00000408314 OR1G1P47890 313 aa10.02□□□□□ -0.81
SNORD88A-201ENST00000408314 ATP2C1P98194 919 aaPredicted RBP10.02□□□□□ -0.81
SNORD88A-201ENST00000408314 KCNC3Q14003 757 aa10.02□□□□□ -0.81
SNORD88A-201ENST00000408314 LARP1BQ659C4 914 aaKnown RBP10.02□□□□□ -0.81
SNORD88A-201ENST00000408314 KIAA1841Q6NSI8 718 aa10.02□□□□□ -0.81
SNORD88A-201ENST00000408314 GPR65Q8IYL9 337 aa10.02□□□□□ -0.81
SNORD88A-201ENST00000408314 C4orf32Q8N8J7 132 aa10.02□□□□□ -0.81
SNORD88A-201ENST00000408314 CPB2Q96IY4 423 aa10.02□□□□□ -0.81
SNORD88A-201ENST00000408314 GAD1Q99259 594 aa10.02□□□□□ -0.81
SNORD88A-201ENST00000408314 HERC2P3Q9BVR0 1158 aa10.02□□□□□ -0.81
SNORD88A-201ENST00000408314 APOL6Q9BWW8 343 aa10.02□□□□□ -0.81
SNORD88A-201ENST00000408314 EIF2AQ9BY44 585 aaKnown RBP10.02□□□□□ -0.81
SNORD88A-201ENST00000408314 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.02□□□□□ -0.81
SNORD88A-201ENST00000408314 DNAJB4Q9UDY4 337 aa10.02□□□□□ -0.81
SNORD88A-201ENST00000408314 PARP2Q9UGN5 583 aa10.02□□□□□ -0.81
SNORD88A-201ENST00000408314 RBM19Q9Y4C8 960 aaKnown RBP10.02□□□□□ -0.81
SNORD88A-201ENST00000408314 PCDHGC5Q9Y5F6 944 aa10.02□□□□□ -0.81
SNORD88A-201ENST00000408314 MUC3AQ02505 3323 aa10.02□□□□□ -0.81
SNORD88A-201ENST00000408314 PRR33A8MZF0 331 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms