RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.74□□□□□ -0.21
RNF43-201ENST00000407977 PDXKO00764 312 aa13.74□□□□□ -0.21
RNF43-201ENST00000407977 SPAG6O75602 509 aa13.74□□□□□ -0.21
RNF43-201ENST00000407977 CAPRIN1Q14444 709 aaKnown RBP13.74□□□□□ -0.21
RNF43-201ENST00000407977 TMEM154Q6P9G4 183 aa13.74□□□□□ -0.21
RNF43-201ENST00000407977 PADI6Q6TGC4 694 aa13.74□□□□□ -0.21
RNF43-201ENST00000407977 METTL16Q86W50 562 aaKnown RBP13.74□□□□□ -0.21
RNF43-201ENST00000407977 GJB4Q9NTQ9 266 aa13.74□□□□□ -0.21
RNF43-201ENST00000407977 PARVAQ9NVD7 372 aa13.74□□□□□ -0.21
RNF43-201ENST00000407977 TUBE1Q9UJT0 475 aa13.74□□□□□ -0.21
RNF43-201ENST00000407977 STAP1Q9ULZ2 295 aa13.74□□□□□ -0.21
RNF43-201ENST00000407977 KRT8P05787 483 aa13.73□□□□□ -0.21
RNF43-201ENST00000407977 CDH2P19022 906 aaPredicted RBP13.73□□□□□ -0.21
RNF43-201ENST00000407977 MAP4P27816 1152 aaKnown RBP13.73□□□□□ -0.21
RNF43-201ENST00000407977 MCAMP43121 646 aa13.73□□□□□ -0.21
RNF43-201ENST00000407977 CRKLP46109 303 aaKnown RBP13.73□□□□□ -0.21
RNF43-201ENST00000407977 SERPINB9P50453 376 aa13.73□□□□□ -0.21
RNF43-201ENST00000407977 PSMC1P62191 440 aaKnown RBP13.73□□□□□ -0.21
RNF43-201ENST00000407977 MTF1Q14872 753 aa13.73□□□□□ -0.21
RNF43-201ENST00000407977 NR1I3Q14994 352 aa13.73□□□□□ -0.21
RNF43-201ENST00000407977 TRIM60Q495X7 471 aa13.73□□□□□ -0.21
RNF43-201ENST00000407977 GLYCTKQ8IVS8 523 aa13.73□□□□□ -0.21
RNF43-201ENST00000407977 PCDHA6Q9UN73 950 aa13.73□□□□□ -0.21
RNF43-201ENST00000407977 PCDHA8Q9Y5H6 950 aa13.73□□□□□ -0.21
RNF43-201ENST00000407977 HEY1Q9Y5J3 304 aa13.73□□□□□ -0.21
RNF43-201ENST00000407977 HEG1Q9ULI3 1381 aa13.73□□□□□ -0.21
RNF43-201ENST00000407977 CLDN3O15551 220 aa13.73□□□□□ -0.21
RNF43-201ENST00000407977 GRM4Q14833 912 aa13.73□□□□□ -0.21
RNF43-201ENST00000407977 CRYMQ14894 314 aa13.73□□□□□ -0.21
RNF43-201ENST00000407977 EXT2Q93063 718 aa13.73□□□□□ -0.21
RNF43-201ENST00000407977 DYNLL2Q96FJ2 89 aa13.73□□□□□ -0.21
RNF43-201ENST00000407977 REREQ9P2R6 1566 aa13.73□□□□□ -0.21
RNF43-201ENST00000407977 NCAPD2Q15021 1401 aa13.73□□□□□ -0.21
RNF43-201ENST00000407977 CCDC195A0A1B0GUA6 201 aa13.73□□□□□ -0.21
RNF43-201ENST00000407977 ELOA2Q8IYF1 753 aaPredicted RBP13.73□□□□□ -0.21
RNF43-201ENST00000407977 ZNF710Q8N1W2 664 aa13.73□□□□□ -0.21
RNF43-201ENST00000407977 SNX19Q92543 992 aa13.73□□□□□ -0.21
RNF43-201ENST00000407977 BARHL2Q9NY43 387 aa13.73□□□□□ -0.21
RNF43-201ENST00000407977 CCDC159P0C7I6 412 aa13.73□□□□□ -0.21
RNF43-201ENST00000407977 TBCCQ15814 346 aa13.73□□□□□ -0.21
RNF43-201ENST00000407977 ZNF699Q32M78 642 aa13.73□□□□□ -0.21
RNF43-201ENST00000407977 LRRC8EQ6NSJ5 796 aa13.73□□□□□ -0.21
RNF43-201ENST00000407977 C16orf89Q6UX73 402 aa13.73□□□□□ -0.21
RNF43-201ENST00000407977 CYB5R4Q7L1T6 521 aa13.73□□□□□ -0.21
RNF43-201ENST00000407977 PRUNE1Q86TP1 453 aa13.73□□□□□ -0.21
RNF43-201ENST00000407977 AGPAT1Q99943 283 aa13.73□□□□□ -0.21
RNF43-201ENST00000407977 TRIM45Q9H8W5 580 aaPredicted RBP13.73□□□□□ -0.21
RNF43-201ENST00000407977 BSDC1Q9NW68 430 aaPredicted RBP13.73□□□□□ -0.21
RNF43-201ENST00000407977 PSMC3IPQ9P2W1 217 aaPredicted RBP13.73□□□□□ -0.21
RNF43-201ENST00000407977 NEDD4P46934 1319 aa13.73□□□□□ -0.21
RNF43-201ENST00000407977 GFAPP14136 432 aa13.72□□□□□ -0.21
RNF43-201ENST00000407977 ARSEP51690 589 aa13.72□□□□□ -0.21
RNF43-201ENST00000407977 MAP3K7CLP57077 242 aa13.72□□□□□ -0.21
RNF43-201ENST00000407977 DAB2P98082 770 aa13.72□□□□□ -0.21
RNF43-201ENST00000407977 KRT76Q01546 638 aa13.72□□□□□ -0.21
RNF43-201ENST00000407977 PDIA5Q14554 519 aa13.72□□□□□ -0.21
RNF43-201ENST00000407977 IMPG1Q17R60 797 aa13.72□□□□□ -0.21
RNF43-201ENST00000407977 TBC1D10BQ4KMP7 808 aaPredicted RBP13.72□□□□□ -0.21
RNF43-201ENST00000407977 GADL1Q6ZQY3 521 aa13.72□□□□□ -0.21
RNF43-201ENST00000407977 SH2D3CQ8N5H7 860 aa13.72□□□□□ -0.21
RNF43-201ENST00000407977 OXER1Q8TDS5 423 aa13.72□□□□□ -0.21
RNF43-201ENST00000407977 SLC13A1Q9BZW2 595 aa13.72□□□□□ -0.21
RNF43-201ENST00000407977 SLC40A1Q9NP59 571 aa13.72□□□□□ -0.21
RNF43-201ENST00000407977 SEPT3Q9UH03 358 aa13.72□□□□□ -0.21
RNF43-201ENST00000407977 A0A1W2PQJ5 194 aa13.72□□□□□ -0.21
RNF43-201ENST00000407977 FGFR4P22455 802 aa13.72□□□□□ -0.21
RNF43-201ENST00000407977 NYAP1Q6ZVC0 841 aa13.72□□□□□ -0.21
RNF43-201ENST00000407977 SETD3Q86TU7 594 aaPredicted RBP13.72□□□□□ -0.21
RNF43-201ENST00000407977 ABI1Q8IZP0 508 aa13.72□□□□□ -0.21
RNF43-201ENST00000407977 NLGN1Q8N2Q7 840 aa13.72□□□□□ -0.21
RNF43-201ENST00000407977 CDC26Q8NHZ8 85 aa13.72□□□□□ -0.21
RNF43-201ENST00000407977 COG4Q9H9E3 785 aa13.72□□□□□ -0.21
RNF43-201ENST00000407977 FBXO2Q9UK22 296 aaPredicted RBP13.72□□□□□ -0.21
RNF43-201ENST00000407977 GNA15P30679 374 aa13.72□□□□□ -0.21
RNF43-201ENST00000407977 HNRNPH1P31943 449 aaKnown RBP13.72□□□□□ -0.21
RNF43-201ENST00000407977 SFNP31947 248 aa13.72□□□□□ -0.21
RNF43-201ENST00000407977 HSPA13P48723 471 aa13.72□□□□□ -0.21
RNF43-201ENST00000407977 PTGISQ16647 500 aa13.72□□□□□ -0.21
RNF43-201ENST00000407977 TEX2Q8IWB9 1127 aa13.72□□□□□ -0.21
RNF43-201ENST00000407977 RCOR2Q8IZ40 523 aa13.72□□□□□ -0.21
RNF43-201ENST00000407977 ULK4Q96C45 1275 aa13.72□□□□□ -0.21
RNF43-201ENST00000407977 SEC31BQ9NQW1 1179 aa13.72□□□□□ -0.21
RNF43-201ENST00000407977 PPEF1O14829 653 aaPredicted RBP13.72□□□□□ -0.21
RNF43-201ENST00000407977 DPF2Q92785 391 aa13.72□□□□□ -0.21
RNF43-201ENST00000407977 ISCUQ9H1K1 167 aa13.72□□□□□ -0.21
RNF43-201ENST00000407977 CYP2D7A0A087X1C5 515 aa13.71□□□□□ -0.21
RNF43-201ENST00000407977 HSPA2P54652 639 aa13.71□□□□□ -0.21
RNF43-201ENST00000407977 KPNB1Q14974 876 aaKnown RBP13.71□□□□□ -0.21
RNF43-201ENST00000407977 ZC3H12BQ5HYM0 836 aaKnown RBP13.71□□□□□ -0.21
RNF43-201ENST00000407977 USPL1Q5W0Q7 1092 aa13.71□□□□□ -0.21
RNF43-201ENST00000407977 ANGPTL8Q6UXH0 198 aa13.71□□□□□ -0.21
RNF43-201ENST00000407977 ADSSL1Q8N142 457 aa13.71□□□□□ -0.21
RNF43-201ENST00000407977 GIMAP8Q8ND71 665 aaPredicted RBP13.71□□□□□ -0.21
RNF43-201ENST00000407977 OR6B3Q8NGW1 331 aa13.71□□□□□ -0.21
RNF43-201ENST00000407977 RAPGEF5Q92565 580 aa13.71□□□□□ -0.21
RNF43-201ENST00000407977 C10orf88Q9H8K7 445 aa13.71□□□□□ -0.21
RNF43-201ENST00000407977 ZNF408Q9H9D4 720 aa13.71□□□□□ -0.21
RNF43-201ENST00000407977 L2HGDHQ9H9P8 463 aa13.71□□□□□ -0.21
RNF43-201ENST00000407977 ZBTB1Q9Y2K1 713 aa13.71□□□□□ -0.21
RNF43-201ENST00000407977 SFI1A8K8P3 1242 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms