RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 POLD4Q9HCU8 107 aa21.37■■□□□ 1.01
SMARCB1-204ENST00000407422 ARL5CA6NH57 179 aa21.37■■□□□ 1.01
SMARCB1-204ENST00000407422 CLASP2O75122 1294 aaKnown RBP21.37■■□□□ 1.01
SMARCB1-204ENST00000407422 CYP11B2P19099 503 aa21.37■■□□□ 1.01
SMARCB1-204ENST00000407422 MLH1P40692 756 aa21.37■■□□□ 1.01
SMARCB1-204ENST00000407422 IL17AQ16552 155 aa21.37■■□□□ 1.01
SMARCB1-204ENST00000407422 SYCE2Q6PIF2 218 aa21.37■■□□□ 1.01
SMARCB1-204ENST00000407422 IGSF22Q8N9C0 903 aa21.37■■□□□ 1.01
SMARCB1-204ENST00000407422 ZFP42Q96MM3 310 aa21.37■■□□□ 1.01
SMARCB1-204ENST00000407422 S1PR5Q9H228 398 aa21.37■■□□□ 1.01
SMARCB1-204ENST00000407422 UBN1Q9NPG3 1134 aa21.37■■□□□ 1.01
SMARCB1-204ENST00000407422 MIOSQ9NXC5 875 aa21.37■■□□□ 1.01
SMARCB1-204ENST00000407422 KANSL3Q9P2N6 904 aa21.37■■□□□ 1.01
SMARCB1-204ENST00000407422 KIAA1024Q9UPX6 916 aa21.37■■□□□ 1.01
SMARCB1-204ENST00000407422 HCFC2Q9Y5Z7 792 aa21.37■■□□□ 1.01
SMARCB1-204ENST00000407422 TTLL13PA6NNM8 815 aa21.36■■□□□ 1.01
SMARCB1-204ENST00000407422 PP2D1A8MPX8 630 aa21.36■■□□□ 1.01
SMARCB1-204ENST00000407422 GPR37L1O60883 481 aa21.36■■□□□ 1.01
SMARCB1-204ENST00000407422 GJB2P29033 226 aa21.36■■□□□ 1.01
SMARCB1-204ENST00000407422 PDIA5Q14554 519 aa21.36■■□□□ 1.01
SMARCB1-204ENST00000407422 CDCA2Q69YH5 1023 aaPredicted RBP21.36■■□□□ 1.01
SMARCB1-204ENST00000407422 SUSD6Q92537 303 aa21.36■■□□□ 1.01
SMARCB1-204ENST00000407422 TBC1D32Q96NH3 1257 aa21.36■■□□□ 1.01
SMARCB1-204ENST00000407422 FAM193BQ96PV7 902 aaPredicted RBP21.36■■□□□ 1.01
SMARCB1-204ENST00000407422 TRIM6Q9C030 488 aaPredicted RBP21.36■■□□□ 1.01
SMARCB1-204ENST00000407422 BHMT2Q9H2M3 363 aa21.36■■□□□ 1.01
SMARCB1-204ENST00000407422 KIF3AQ9Y496 699 aa21.36■■□□□ 1.01
SMARCB1-204ENST00000407422 A0A1B0GUA9 196 aa21.35■■□□□ 1.01
SMARCB1-204ENST00000407422 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.35■■□□□ 1.01
SMARCB1-204ENST00000407422 NRP1O14786 923 aa21.35■■□□□ 1.01
SMARCB1-204ENST00000407422 NPTXRO95502 500 aa21.35■■□□□ 1.01
SMARCB1-204ENST00000407422 ALDH2P05091 517 aa21.35■■□□□ 1.01
SMARCB1-204ENST00000407422 SRGAP2BP0DMP2 458 aa21.35■■□□□ 1.01
SMARCB1-204ENST00000407422 CTSAP10619 480 aa21.35■■□□□ 1.01
SMARCB1-204ENST00000407422 ALADP13716 330 aa21.35■■□□□ 1.01
SMARCB1-204ENST00000407422 MUTP22033 750 aa21.35■■□□□ 1.01
SMARCB1-204ENST00000407422 FZD8Q9H461 694 aa21.35■■□□□ 1.01
SMARCB1-204ENST00000407422 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.35■■□□□ 1.01
SMARCB1-204ENST00000407422 DDX19AQ9NUU7 478 aaKnown RBP21.35■■□□□ 1.01
SMARCB1-204ENST00000407422 USP20Q9Y2K6 914 aa21.35■■□□□ 1.01
SMARCB1-204ENST00000407422 CARNS1A5YM72 827 aa21.34■■□□□ 1.01
SMARCB1-204ENST00000407422 INPPL1O15357 1258 aa21.34■■□□□ 1.01
SMARCB1-204ENST00000407422 DCXO43602 365 aa21.34■■□□□ 1.01
SMARCB1-204ENST00000407422 AKAP5P24588 427 aa21.34■■□□□ 1.01
SMARCB1-204ENST00000407422 CDC25AP30304 524 aa21.34■■□□□ 1.01
SMARCB1-204ENST00000407422 SCNN1GP51170 649 aa21.34■■□□□ 1.01
SMARCB1-204ENST00000407422 BMS1Q14692 1282 aaKnown RBP21.34■■□□□ 1.01
SMARCB1-204ENST00000407422 SLC27A1Q6PCB7 646 aa21.34■■□□□ 1.01
SMARCB1-204ENST00000407422 COLGALT2Q8IYK4 626 aa21.34■■□□□ 1.01
SMARCB1-204ENST00000407422 SNX29Q8TEQ0 813 aa21.34■■□□□ 1.01
SMARCB1-204ENST00000407422 TMEM175Q9BSA9 504 aa21.34■■□□□ 1.01
SMARCB1-204ENST00000407422 CDH22Q9UJ99 828 aa21.34■■□□□ 1.01
SMARCB1-204ENST00000407422 FAN1Q9Y2M0 1017 aa21.34■■□□□ 1.01
SMARCB1-204ENST00000407422 WDFY4Q6ZS81 3184 aa21.33■■□□□ 1.01
SMARCB1-204ENST00000407422 PPP4R3CPQ6ZMV5 832 aa21.33■■□□□ 1.01
SMARCB1-204ENST00000407422 RNF135Q8IUD6 432 aa21.33■■□□□ 1.01
SMARCB1-204ENST00000407422 ZBTB8OSQ8IWT0 167 aa21.33■■□□□ 1.01
SMARCB1-204ENST00000407422 GSTCDQ8NEC7 633 aa21.33■■□□□ 1.01
SMARCB1-204ENST00000407422 PRMT7Q9NVM4 692 aaPredicted RBP21.33■■□□□ 1.01
SMARCB1-204ENST00000407422 MUTYHQ9UIF7 546 aa21.33■■□□□ 1.01
SMARCB1-204ENST00000407422 PRG3Q9Y2Y8 225 aaPredicted RBP21.33■■□□□ 1.01
SMARCB1-204ENST00000407422 IRAK3Q9Y616 596 aa21.33■■□□□ 1.01
SMARCB1-204ENST00000407422 LOC730098B7Z3J9 87 aa21.33■■□□□ 1
SMARCB1-204ENST00000407422 SSBP05455 408 aaKnown RBP eCLIP21.33■■□□□ 1
SMARCB1-204ENST00000407422 PTPN14Q15678 1187 aa21.33■■□□□ 1
SMARCB1-204ENST00000407422 CASP10Q92851 521 aa21.33■■□□□ 1
SMARCB1-204ENST00000407422 PRIMPOLQ96LW4 560 aa21.33■■□□□ 1
SMARCB1-204ENST00000407422 KIFC3Q9BVG8 833 aa21.33■■□□□ 1
SMARCB1-204ENST00000407422 PHF7Q9BWX1 381 aaPredicted RBP21.33■■□□□ 1
SMARCB1-204ENST00000407422 RAB34Q9BZG1 259 aa21.33■■□□□ 1
SMARCB1-204ENST00000407422 MARCH5Q9NX47 278 aa21.33■■□□□ 1
SMARCB1-204ENST00000407422 KLK14Q9P0G3 267 aa21.33■■□□□ 1
SMARCB1-204ENST00000407422 GIT1Q9Y2X7 761 aa21.33■■□□□ 1
SMARCB1-204ENST00000407422 E9PMD0 336 aa21.32■■□□□ 1
SMARCB1-204ENST00000407422 F8W810 466 aa21.32■■□□□ 1
SMARCB1-204ENST00000407422 LAD1O00515 517 aa21.32■■□□□ 1
SMARCB1-204ENST00000407422 EDN1P05305 212 aa21.32■■□□□ 1
SMARCB1-204ENST00000407422 HOXB8P17481 243 aaPredicted RBP21.32■■□□□ 1
SMARCB1-204ENST00000407422 LIG1P18858 919 aa21.32■■□□□ 1
SMARCB1-204ENST00000407422 NAMPTP43490 491 aa21.32■■□□□ 1
SMARCB1-204ENST00000407422 OR1G1P47890 313 aa21.32■■□□□ 1
SMARCB1-204ENST00000407422 MCM2P49736 904 aa21.32■■□□□ 1
SMARCB1-204ENST00000407422 DSC1Q08554 894 aa21.32■■□□□ 1
SMARCB1-204ENST00000407422 CBX2Q14781 532 aaPredicted RBP21.32■■□□□ 1
SMARCB1-204ENST00000407422 FAM187BQ17R55 369 aa21.32■■□□□ 1
SMARCB1-204ENST00000407422 DTHD1Q6ZMT9 781 aa21.32■■□□□ 1
SMARCB1-204ENST00000407422 RPGRIP1Q96KN7 1286 aa21.32■■□□□ 1
SMARCB1-204ENST00000407422 MMTAG2Q9BU76 263 aaKnown RBP21.32■■□□□ 1
SMARCB1-204ENST00000407422 CCDC113Q9H0I3 377 aa21.32■■□□□ 1
SMARCB1-204ENST00000407422 C2orf40Q9H1Z8 148 aa21.32■■□□□ 1
SMARCB1-204ENST00000407422 H3BQV1 296 aa21.31■■□□□ 1
SMARCB1-204ENST00000407422 EPCAMP16422 314 aa21.31■■□□□ 1
SMARCB1-204ENST00000407422 PRPHP41219 470 aa21.31■■□□□ 1
SMARCB1-204ENST00000407422 RILPL1Q5EBL4 403 aa21.31■■□□□ 1
SMARCB1-204ENST00000407422 HACE1Q8IYU2 909 aa21.31■■□□□ 1
SMARCB1-204ENST00000407422 TMEM87AQ8NBN3 555 aa21.31■■□□□ 1
SMARCB1-204ENST00000407422 DEPTORQ8TB45 409 aa21.31■■□□□ 1
SMARCB1-204ENST00000407422 PDZD7Q9H5P4 517 aa21.31■■□□□ 1
SMARCB1-204ENST00000407422 PARP2Q9UGN5 583 aa21.31■■□□□ 1
SMARCB1-204ENST00000407422 SMC3Q9UQE7 1217 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms