RNA–Protein interactions for RNA: ENST00000406434.5

FAM49A-202, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FAM49A, Length 1,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-202ENST00000406434 USP20Q9Y2K6 914 aa11.43□□□□□ -0.58
FAM49A-202ENST00000406434 SFI1A8K8P3 1242 aa11.42□□□□□ -0.58
FAM49A-202ENST00000406434 HIP1RO75146 1068 aa11.42□□□□□ -0.58
FAM49A-202ENST00000406434 NPTXRO95502 500 aa11.42□□□□□ -0.58
FAM49A-202ENST00000406434 IRS1P35568 1242 aa11.42□□□□□ -0.58
FAM49A-202ENST00000406434 ALDH7A1P49419 539 aaKnown RBP11.42□□□□□ -0.58
FAM49A-202ENST00000406434 BCAR1P56945 870 aa11.42□□□□□ -0.58
FAM49A-202ENST00000406434 KRT17Q04695 432 aa11.42□□□□□ -0.58
FAM49A-202ENST00000406434 GRIN1Q05586 938 aa11.42□□□□□ -0.58
FAM49A-202ENST00000406434 CAMK1Q14012 370 aa11.42□□□□□ -0.58
FAM49A-202ENST00000406434 AMHR2Q16671 573 aa11.42□□□□□ -0.58
FAM49A-202ENST00000406434 CSPP1Q1MSJ5 1256 aa11.42□□□□□ -0.58
FAM49A-202ENST00000406434 SPECC1Q5M775 1068 aa11.42□□□□□ -0.58
FAM49A-202ENST00000406434 AGMOQ6ZNB7 445 aa11.42□□□□□ -0.58
FAM49A-202ENST00000406434 MRPL10Q7Z7H8 261 aaKnown RBP11.42□□□□□ -0.58
FAM49A-202ENST00000406434 RBM23Q86U06 439 aaKnown RBP11.42□□□□□ -0.58
FAM49A-202ENST00000406434 CNNM3Q8NE01 707 aa11.42□□□□□ -0.58
FAM49A-202ENST00000406434 URGCPQ8TCY9 931 aa11.42□□□□□ -0.58
FAM49A-202ENST00000406434 SYMPKQ92797 1274 aaKnown RBP11.42□□□□□ -0.58
FAM49A-202ENST00000406434 KIFAP3Q92845 792 aa11.42□□□□□ -0.58
FAM49A-202ENST00000406434 CALML4Q96GE6 196 aa11.42□□□□□ -0.58
FAM49A-202ENST00000406434 FAM193BQ96PV7 902 aaPredicted RBP11.42□□□□□ -0.58
FAM49A-202ENST00000406434 KIFC3Q9BVG8 833 aa11.42□□□□□ -0.58
FAM49A-202ENST00000406434 RUSC1Q9BVN2 902 aa11.42□□□□□ -0.58
FAM49A-202ENST00000406434 COL25A1Q9BXS0 654 aaPredicted RBP11.42□□□□□ -0.58
FAM49A-202ENST00000406434 MRPL9Q9BYD2 267 aaKnown RBP11.42□□□□□ -0.58
FAM49A-202ENST00000406434 NFKBIZQ9BYH8 718 aa11.42□□□□□ -0.58
FAM49A-202ENST00000406434 NT5C3AQ9H0P0 336 aa11.42□□□□□ -0.58
FAM49A-202ENST00000406434 C2orf40Q9H1Z8 148 aa11.42□□□□□ -0.58
FAM49A-202ENST00000406434 RSAD1Q9HA92 442 aa11.42□□□□□ -0.58
FAM49A-202ENST00000406434 PRMT7Q9NVM4 692 aaPredicted RBP11.42□□□□□ -0.58
FAM49A-202ENST00000406434 SPG21Q9NZD8 308 aa11.42□□□□□ -0.58
FAM49A-202ENST00000406434 PUF60Q9UHX1 559 aaKnown RBP11.42□□□□□ -0.58
FAM49A-202ENST00000406434 HES2Q9Y543 173 aa11.42□□□□□ -0.58
FAM49A-202ENST00000406434 UNC80Q8N2C7 3258 aa11.41□□□□□ -0.58
FAM49A-202ENST00000406434 K7ERI5 159 aa11.41□□□□□ -0.58
FAM49A-202ENST00000406434 ZC3H11AO75152 810 aaKnown RBP eCLIP11.41□□□□□ -0.58
FAM49A-202ENST00000406434 POMCP01189 267 aa11.41□□□□□ -0.58
FAM49A-202ENST00000406434 PRKCBP05771 671 aa11.41□□□□□ -0.58
FAM49A-202ENST00000406434 PLA2G4BP0C869 781 aa11.41□□□□□ -0.58
FAM49A-202ENST00000406434 NCLP19338 710 aaKnown RBP11.41□□□□□ -0.58
FAM49A-202ENST00000406434 KCNA5P22460 613 aa11.41□□□□□ -0.58
FAM49A-202ENST00000406434 CA8P35219 290 aa11.41□□□□□ -0.58
FAM49A-202ENST00000406434 GTF2F1P35269 517 aaKnown RBP eCLIP11.41□□□□□ -0.58
FAM49A-202ENST00000406434 LONP1P36776 959 aaKnown RBP11.41□□□□□ -0.58
FAM49A-202ENST00000406434 NAMPTP43490 491 aa11.41□□□□□ -0.58
FAM49A-202ENST00000406434 KCNQ1P51787 676 aa11.41□□□□□ -0.58
FAM49A-202ENST00000406434 AFF1P51825 1210 aaKnown RBP11.41□□□□□ -0.58
FAM49A-202ENST00000406434 PEX3P56589 373 aa11.41□□□□□ -0.58
FAM49A-202ENST00000406434 PRPF4BQ13523 1007 aaKnown RBP11.41□□□□□ -0.58
FAM49A-202ENST00000406434 MAPK6Q16659 721 aa11.41□□□□□ -0.58
FAM49A-202ENST00000406434 HYIQ5T013 277 aa11.41□□□□□ -0.58
FAM49A-202ENST00000406434 C1orf186Q6ZWK4 172 aa11.41□□□□□ -0.58
FAM49A-202ENST00000406434 SMG8Q8ND04 991 aaKnown RBP11.41□□□□□ -0.58
FAM49A-202ENST00000406434 CCDC51Q96ER9 411 aa11.41□□□□□ -0.58
FAM49A-202ENST00000406434 AK8Q96MA6 479 aa11.41□□□□□ -0.58
FAM49A-202ENST00000406434 FZD8Q9H461 694 aa11.41□□□□□ -0.58
FAM49A-202ENST00000406434 ZSCAN16Q9H4T2 348 aaPredicted RBP11.41□□□□□ -0.58
FAM49A-202ENST00000406434 NRDE2Q9H7Z3 1164 aa11.41□□□□□ -0.58
FAM49A-202ENST00000406434 UBE2ZQ9H832 354 aaPredicted RBP11.41□□□□□ -0.58
FAM49A-202ENST00000406434 TBC1D13Q9NVG8 400 aa11.41□□□□□ -0.58
FAM49A-202ENST00000406434 CLDND1Q9NY35 253 aa11.41□□□□□ -0.58
FAM49A-202ENST00000406434 PARP2Q9UGN5 583 aa11.41□□□□□ -0.58
FAM49A-202ENST00000406434 IPPQ9Y573 584 aa11.41□□□□□ -0.58
FAM49A-202ENST00000406434 PCDHGC5Q9Y5F6 944 aa11.41□□□□□ -0.58
FAM49A-202ENST00000406434 PLXNA4Q9HCM2 1894 aa11.41□□□□□ -0.58
FAM49A-202ENST00000406434 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.41□□□□□ -0.58
FAM49A-202ENST00000406434 NPHP3-ACAD11A0A0J9YXS1 232 aa11.41□□□□□ -0.58
FAM49A-202ENST00000406434 A0A1B0GUA9 196 aa11.41□□□□□ -0.58
FAM49A-202ENST00000406434 AKAP5P24588 427 aa11.41□□□□□ -0.58
FAM49A-202ENST00000406434 ERVFC1P60507 584 aa11.41□□□□□ -0.58
FAM49A-202ENST00000406434 HYAL1Q12794 435 aa11.41□□□□□ -0.58
FAM49A-202ENST00000406434 KARSQ15046 597 aaKnown RBP11.41□□□□□ -0.58
FAM49A-202ENST00000406434 PTPAQ15257 358 aa11.41□□□□□ -0.58
FAM49A-202ENST00000406434 FOXD4L6Q3SYB3 417 aaPredicted RBP11.41□□□□□ -0.58
FAM49A-202ENST00000406434 PLPP4Q5VZY2 271 aa11.41□□□□□ -0.58
FAM49A-202ENST00000406434 CDCA2Q69YH5 1023 aaPredicted RBP11.41□□□□□ -0.58
FAM49A-202ENST00000406434 SLC27A1Q6PCB7 646 aa11.41□□□□□ -0.58
FAM49A-202ENST00000406434 FOXD4L3Q6VB84 417 aaPredicted RBP11.41□□□□□ -0.58
FAM49A-202ENST00000406434 TMC7Q7Z402 723 aa11.41□□□□□ -0.58
FAM49A-202ENST00000406434 ZNF280BQ86YH2 543 aa11.41□□□□□ -0.58
FAM49A-202ENST00000406434 HACE1Q8IYU2 909 aa11.41□□□□□ -0.58
FAM49A-202ENST00000406434 SYT2Q8N9I0 419 aaPredicted RBP11.41□□□□□ -0.58
FAM49A-202ENST00000406434 MRPS27Q92552 414 aaKnown RBP11.41□□□□□ -0.58
FAM49A-202ENST00000406434 PPP2R3CQ969Q6 453 aa11.41□□□□□ -0.58
FAM49A-202ENST00000406434 DRC1Q96MC2 740 aa11.41□□□□□ -0.58
FAM49A-202ENST00000406434 CLIC6Q96NY7 704 aa11.41□□□□□ -0.58
FAM49A-202ENST00000406434 GAD1Q99259 594 aa11.41□□□□□ -0.58
FAM49A-202ENST00000406434 TLE6Q9H808 572 aa11.41□□□□□ -0.58
FAM49A-202ENST00000406434 UBN1Q9NPG3 1134 aa11.41□□□□□ -0.58
FAM49A-202ENST00000406434 ENTPD7Q9NQZ7 604 aa11.41□□□□□ -0.58
FAM49A-202ENST00000406434 TLR9Q9NR96 1032 aa11.41□□□□□ -0.58
FAM49A-202ENST00000406434 KLK14Q9P0G3 267 aa11.41□□□□□ -0.58
FAM49A-202ENST00000406434 KANSL3Q9P2N6 904 aa11.41□□□□□ -0.58
FAM49A-202ENST00000406434 TFIP11Q9UBB9 837 aaKnown RBP11.41□□□□□ -0.58
FAM49A-202ENST00000406434 H3BQ06 376 aaPredicted RBP11.4□□□□□ -0.59
FAM49A-202ENST00000406434 ACKR2O00590 384 aa11.4□□□□□ -0.59
FAM49A-202ENST00000406434 N4BP3O15049 544 aa11.4□□□□□ -0.59
FAM49A-202ENST00000406434 PER2O15055 1255 aa11.4□□□□□ -0.59
FAM49A-202ENST00000406434 DDHD2O94830 711 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms