RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 ICAM1P05362 532 aa10.64□□□□□ -0.71
MSH2-202ENST00000406134 NUDT17P0C025 328 aa10.64□□□□□ -0.71
MSH2-202ENST00000406134 RPL21P46778 160 aaKnown RBP10.64□□□□□ -0.71
MSH2-202ENST00000406134 MIGA2Q7L4E1 593 aa10.64□□□□□ -0.71
MSH2-202ENST00000406134 MAATS1Q7Z4T9 603 aa10.64□□□□□ -0.71
MSH2-202ENST00000406134 YTHDF3Q7Z739 585 aaKnown RBP10.64□□□□□ -0.71
MSH2-202ENST00000406134 JAMLQ86YT9 394 aa10.64□□□□□ -0.71
MSH2-202ENST00000406134 PRPF38AQ8NAV1 312 aaKnown RBP10.64□□□□□ -0.71
MSH2-202ENST00000406134 BSNDQ8WZ55 320 aa10.64□□□□□ -0.71
MSH2-202ENST00000406134 FAM84AQ96KN4 292 aa10.64□□□□□ -0.71
MSH2-202ENST00000406134 ZSWIM1Q9BR11 485 aa10.64□□□□□ -0.71
MSH2-202ENST00000406134 SCAF8Q9UPN6 1271 aaKnown RBP10.64□□□□□ -0.71
MSH2-202ENST00000406134 FSBPO95073 299 aa10.63□□□□□ -0.71
MSH2-202ENST00000406134 FTLP02792 175 aaPredicted RBP10.63□□□□□ -0.71
MSH2-202ENST00000406134 MMEP08473 750 aa10.63□□□□□ -0.71
MSH2-202ENST00000406134 PYGMP11217 842 aa10.63□□□□□ -0.71
MSH2-202ENST00000406134 PLS3P13797 630 aa10.63□□□□□ -0.71
MSH2-202ENST00000406134 RFX1P22670 979 aa10.63□□□□□ -0.71
MSH2-202ENST00000406134 WNT7BP56706 349 aa10.63□□□□□ -0.71
MSH2-202ENST00000406134 DHX9Q08211 1270 aaKnown RBP10.63□□□□□ -0.71
MSH2-202ENST00000406134 SPDYCQ5MJ68 293 aa10.63□□□□□ -0.71
MSH2-202ENST00000406134 FBXW10Q5XX13 1052 aa10.63□□□□□ -0.71
MSH2-202ENST00000406134 LMBR1Q8WVP7 490 aa10.63□□□□□ -0.71
MSH2-202ENST00000406134 CYFIP2Q96F07 1278 aa10.63□□□□□ -0.71
MSH2-202ENST00000406134 WNK4Q96J92 1243 aa10.63□□□□□ -0.71
MSH2-202ENST00000406134 AAASQ9NRG9 546 aa10.63□□□□□ -0.71
MSH2-202ENST00000406134 PCYOX1Q9UHG3 505 aa10.63□□□□□ -0.71
MSH2-202ENST00000406134 DDX20Q9UHI6 824 aaKnown RBP10.63□□□□□ -0.71
MSH2-202ENST00000406134 DAAM1Q9Y4D1 1078 aa10.63□□□□□ -0.71
MSH2-202ENST00000406134 H0YIN7 160 aa10.63□□□□□ -0.71
MSH2-202ENST00000406134 MAPK13O15264 365 aa10.63□□□□□ -0.71
MSH2-202ENST00000406134 EXOC3O60645 756 aa10.63□□□□□ -0.71
MSH2-202ENST00000406134 HPDP32754 393 aaPredicted RBP10.63□□□□□ -0.71
MSH2-202ENST00000406134 DR1Q01658 176 aa10.63□□□□□ -0.71
MSH2-202ENST00000406134 TBC1D10BQ4KMP7 808 aaPredicted RBP10.63□□□□□ -0.71
MSH2-202ENST00000406134 VPS36Q86VN1 386 aa10.63□□□□□ -0.71
MSH2-202ENST00000406134 FBXO25Q8TCJ0 367 aa10.63□□□□□ -0.71
MSH2-202ENST00000406134 ATXN2LQ8WWM7 1075 aaKnown RBP10.63□□□□□ -0.71
MSH2-202ENST00000406134 SHC3Q92529 594 aa10.63□□□□□ -0.71
MSH2-202ENST00000406134 RAPGEF5Q92565 580 aa10.63□□□□□ -0.71
MSH2-202ENST00000406134 PKD2L1Q9P0L9 805 aa10.63□□□□□ -0.71
MSH2-202ENST00000406134 DIS3Q9Y2L1 958 aaKnown RBP10.63□□□□□ -0.71
MSH2-202ENST00000406134 MRPL11Q9Y3B7 192 aaKnown RBP10.63□□□□□ -0.71
MSH2-202ENST00000406134 MEFVO15553 781 aaPredicted RBP10.63□□□□□ -0.71
MSH2-202ENST00000406134 MYZAPP0CAP1 466 aa10.63□□□□□ -0.71
MSH2-202ENST00000406134 COMTP21964 271 aa10.63□□□□□ -0.71
MSH2-202ENST00000406134 KCNA3P22001 575 aa10.63□□□□□ -0.71
MSH2-202ENST00000406134 DRG2P55039 364 aaKnown RBP10.63□□□□□ -0.71
MSH2-202ENST00000406134 BIRC3Q13489 604 aa10.63□□□□□ -0.71
MSH2-202ENST00000406134 NIPA1Q7RTP0 329 aa10.63□□□□□ -0.71
MSH2-202ENST00000406134 CBWD2Q8IUF1 395 aa10.63□□□□□ -0.71
MSH2-202ENST00000406134 CTNNBL1Q8WYA6 563 aaPredicted RBP10.63□□□□□ -0.71
MSH2-202ENST00000406134 POP1Q99575 1024 aaKnown RBP10.63□□□□□ -0.71
MSH2-202ENST00000406134 JPH2Q9BR39 696 aaPredicted RBP10.63□□□□□ -0.71
MSH2-202ENST00000406134 KIFC3Q9BVG8 833 aa10.63□□□□□ -0.71
MSH2-202ENST00000406134 OSBPL7Q9BZF2 842 aa10.63□□□□□ -0.71
MSH2-202ENST00000406134 TOPORSQ9NS56 1045 aaPredicted RBP10.63□□□□□ -0.71
MSH2-202ENST00000406134 COQ4Q9Y3A0 265 aa10.63□□□□□ -0.71
MSH2-202ENST00000406134 CYP1A2P05177 515 aa10.62□□□□□ -0.71
MSH2-202ENST00000406134 TTC31Q49AM3 519 aaPredicted RBP10.62□□□□□ -0.71
MSH2-202ENST00000406134 PCNX4Q63HM2 1172 aa10.62□□□□□ -0.71
MSH2-202ENST00000406134 INTS8Q75QN2 995 aaKnown RBP10.62□□□□□ -0.71
MSH2-202ENST00000406134 TAS1R3Q7RTX0 852 aa10.62□□□□□ -0.71
MSH2-202ENST00000406134 UBLCP1Q8WVY7 318 aaPredicted RBP10.62□□□□□ -0.71
MSH2-202ENST00000406134 LRRC45Q96CN5 670 aa10.62□□□□□ -0.71
MSH2-202ENST00000406134 TRIM31Q9BZY9 425 aa10.62□□□□□ -0.71
MSH2-202ENST00000406134 PDGFDQ9GZP0 370 aaPredicted RBP10.62□□□□□ -0.71
MSH2-202ENST00000406134 FAM114A2Q9NRY5 505 aa10.62□□□□□ -0.71
MSH2-202ENST00000406134 GGA2Q9UJY4 613 aa10.62□□□□□ -0.71
MSH2-202ENST00000406134 FEM1BQ9UK73 627 aa10.62□□□□□ -0.71
MSH2-202ENST00000406134 ARHGEF35A5YM69 484 aa10.62□□□□□ -0.71
MSH2-202ENST00000406134 A6NNZ2 444 aa10.62□□□□□ -0.71
MSH2-202ENST00000406134 P4HA2O15460 535 aa10.62□□□□□ -0.71
MSH2-202ENST00000406134 PHF2O75151 1096 aa10.62□□□□□ -0.71
MSH2-202ENST00000406134 P4HBP07237 508 aaKnown RBP10.62□□□□□ -0.71
MSH2-202ENST00000406134 MAGOHP61326 146 aaKnown RBP10.62□□□□□ -0.71
MSH2-202ENST00000406134 PPP2R2AP63151 447 aa10.62□□□□□ -0.71
MSH2-202ENST00000406134 TUBB8Q3ZCM7 444 aa10.62□□□□□ -0.71
MSH2-202ENST00000406134 PLA2G4FQ68DD2 849 aa10.62□□□□□ -0.71
MSH2-202ENST00000406134 HS2ST1Q7LGA3 356 aa10.62□□□□□ -0.71
MSH2-202ENST00000406134 TMEM161BQ8NDZ6 487 aa10.62□□□□□ -0.71
MSH2-202ENST00000406134 MDM1Q8TC05 714 aa10.62□□□□□ -0.71
MSH2-202ENST00000406134 NEK9Q8TD19 979 aa10.62□□□□□ -0.71
MSH2-202ENST00000406134 SYTL5Q8TDW5 730 aaPredicted RBP10.62□□□□□ -0.71
MSH2-202ENST00000406134 MAGOHBQ96A72 148 aaKnown RBP10.62□□□□□ -0.71
MSH2-202ENST00000406134 TEPSINQ96N21 525 aa10.62□□□□□ -0.71
MSH2-202ENST00000406134 ZNF317Q96PQ6 595 aaPredicted RBP10.62□□□□□ -0.71
MSH2-202ENST00000406134 FMO2Q99518 471 aa10.62□□□□□ -0.71
MSH2-202ENST00000406134 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.62□□□□□ -0.71
MSH2-202ENST00000406134 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.62□□□□□ -0.71
MSH2-202ENST00000406134 NOVA2Q9UNW9 492 aaKnown RBP10.62□□□□□ -0.71
MSH2-202ENST00000406134 C21orf2O43822 256 aa10.62□□□□□ -0.71
MSH2-202ENST00000406134 CHRM1P11229 460 aaPredicted RBP10.62□□□□□ -0.71
MSH2-202ENST00000406134 TNFAIP3P21580 790 aa10.62□□□□□ -0.71
MSH2-202ENST00000406134 PRPF4BQ13523 1007 aaKnown RBP10.62□□□□□ -0.71
MSH2-202ENST00000406134 SCARA3Q6AZY7 606 aa10.62□□□□□ -0.71
MSH2-202ENST00000406134 ANO5Q75V66 913 aa10.62□□□□□ -0.71
MSH2-202ENST00000406134 FBXL18Q96ME1 805 aa10.62□□□□□ -0.71
MSH2-202ENST00000406134 TRPC6Q9Y210 931 aa10.62□□□□□ -0.71
MSH2-202ENST00000406134 ATP8A1Q9Y2Q0 1164 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms