RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 AGTP01019 485 aa11.56□□□□□ -0.56
CLIP4-204ENST00000404424 ALAS1P13196 640 aa11.56□□□□□ -0.56
CLIP4-204ENST00000404424 PLS3P13797 630 aa11.56□□□□□ -0.56
CLIP4-204ENST00000404424 COL11A2P13942 1736 aaPredicted RBP11.56□□□□□ -0.56
CLIP4-204ENST00000404424 COPB2P35606 906 aa11.56□□□□□ -0.56
CLIP4-204ENST00000404424 DLG4P78352 724 aa11.56□□□□□ -0.56
CLIP4-204ENST00000404424 QPCTQ16769 361 aa11.56□□□□□ -0.56
CLIP4-204ENST00000404424 LACTB2Q53H82 288 aaPredicted RBP11.56□□□□□ -0.56
CLIP4-204ENST00000404424 CCDC137Q6PK04 289 aaKnown RBP11.56□□□□□ -0.56
CLIP4-204ENST00000404424 CYFIP1Q7L576 1253 aa11.56□□□□□ -0.56
CLIP4-204ENST00000404424 NIPA1Q7RTP0 329 aa11.56□□□□□ -0.56
CLIP4-204ENST00000404424 COL23A1Q86Y22 540 aaPredicted RBP11.56□□□□□ -0.56
CLIP4-204ENST00000404424 SLC17A8Q8NDX2 589 aa11.56□□□□□ -0.56
CLIP4-204ENST00000404424 ACER1Q8TDN7 264 aa11.56□□□□□ -0.56
CLIP4-204ENST00000404424 CD101Q93033 1021 aa11.56□□□□□ -0.56
CLIP4-204ENST00000404424 C18orf8Q96DM3 657 aa11.56□□□□□ -0.56
CLIP4-204ENST00000404424 PRMT6Q96LA8 375 aaPredicted RBP11.56□□□□□ -0.56
CLIP4-204ENST00000404424 STMN4Q9H169 189 aaPredicted RBP11.56□□□□□ -0.56
CLIP4-204ENST00000404424 PCIF1Q9H4Z3 704 aa11.56□□□□□ -0.56
CLIP4-204ENST00000404424 AFF2P51816 1311 aa11.56□□□□□ -0.56
CLIP4-204ENST00000404424 RASSF9O75901 435 aa11.55□□□□□ -0.56
CLIP4-204ENST00000404424 DRD4P21917 467 aa11.55□□□□□ -0.56
CLIP4-204ENST00000404424 COMTP21964 271 aa11.55□□□□□ -0.56
CLIP4-204ENST00000404424 GCLMP48507 274 aa11.55□□□□□ -0.56
CLIP4-204ENST00000404424 GTF2BQ00403 316 aa11.55□□□□□ -0.56
CLIP4-204ENST00000404424 FAM71AQ8IYT1 594 aa11.55□□□□□ -0.56
CLIP4-204ENST00000404424 EPS8L1Q8TE68 723 aa11.55□□□□□ -0.56
CLIP4-204ENST00000404424 KRT35Q92764 455 aa11.55□□□□□ -0.56
CLIP4-204ENST00000404424 RNF25Q96BH1 459 aaPredicted RBP11.55□□□□□ -0.56
CLIP4-204ENST00000404424 YY1AP1Q9H869 796 aa11.55□□□□□ -0.56
CLIP4-204ENST00000404424 HSPBP1Q9NZL4 362 aa11.55□□□□□ -0.56
CLIP4-204ENST00000404424 FEM1BQ9UK73 627 aa11.55□□□□□ -0.56
CLIP4-204ENST00000404424 PNMA2Q9UL42 364 aa11.55□□□□□ -0.56
CLIP4-204ENST00000404424 RPTORQ8N122 1335 aa11.55□□□□□ -0.56
CLIP4-204ENST00000404424 RGS16O15492 202 aaPredicted RBP11.55□□□□□ -0.56
CLIP4-204ENST00000404424 CTNND1O60716 968 aaKnown RBP11.55□□□□□ -0.56
CLIP4-204ENST00000404424 LYPLA2O95372 231 aa11.55□□□□□ -0.56
CLIP4-204ENST00000404424 SHBGP04278 402 aa11.55□□□□□ -0.56
CLIP4-204ENST00000404424 GHRP10912 638 aa11.55□□□□□ -0.56
CLIP4-204ENST00000404424 RARGP13631 454 aa11.55□□□□□ -0.56
CLIP4-204ENST00000404424 MXI1P50539 228 aa11.55□□□□□ -0.56
CLIP4-204ENST00000404424 SLC29A2Q14542 456 aa11.55□□□□□ -0.56
CLIP4-204ENST00000404424 MESDQ14696 234 aa11.55□□□□□ -0.56
CLIP4-204ENST00000404424 C1orf220Q5T0J3 134 aa11.55□□□□□ -0.56
CLIP4-204ENST00000404424 STYK1Q6J9G0 422 aa11.55□□□□□ -0.56
CLIP4-204ENST00000404424 LDHDQ86WU2 507 aa11.55□□□□□ -0.56
CLIP4-204ENST00000404424 FLAD1Q8NFF5 587 aa11.55□□□□□ -0.56
CLIP4-204ENST00000404424 CCDC114Q96M63 670 aa11.55□□□□□ -0.56
CLIP4-204ENST00000404424 CBWD1Q9BRT8 395 aa11.55□□□□□ -0.56
CLIP4-204ENST00000404424 OSBPL7Q9BZF2 842 aa11.55□□□□□ -0.56
CLIP4-204ENST00000404424 KDM4CQ9H3R0 1056 aa11.55□□□□□ -0.56
CLIP4-204ENST00000404424 A1CFQ9NQ94 594 aaKnown RBP11.55□□□□□ -0.56
CLIP4-204ENST00000404424 UVRAGQ9P2Y5 699 aa11.55□□□□□ -0.56
CLIP4-204ENST00000404424 ZBTB21Q9ULJ3 1066 aa11.55□□□□□ -0.56
CLIP4-204ENST00000404424 PCDHA3Q9Y5H8 950 aa11.55□□□□□ -0.56
CLIP4-204ENST00000404424 ZHX2Q9Y6X8 837 aa11.55□□□□□ -0.56
CLIP4-204ENST00000404424 ZNF536O15090 1300 aa11.55□□□□□ -0.56
CLIP4-204ENST00000404424 CYP1A2P05177 515 aa11.54□□□□□ -0.56
CLIP4-204ENST00000404424 MMP10P09238 476 aa11.54□□□□□ -0.56
CLIP4-204ENST00000404424 COILP38432 576 aaPredicted RBP11.54□□□□□ -0.56
CLIP4-204ENST00000404424 RPL21P46778 160 aaKnown RBP11.54□□□□□ -0.56
CLIP4-204ENST00000404424 RARRES1P49788 294 aa11.54□□□□□ -0.56
CLIP4-204ENST00000404424 HSD17B4P51659 736 aa11.54□□□□□ -0.56
CLIP4-204ENST00000404424 MFAP3P55082 362 aa11.54□□□□□ -0.56
CLIP4-204ENST00000404424 ANKRD20A8PQ5CZ79 823 aa11.54□□□□□ -0.56
CLIP4-204ENST00000404424 AADACL2Q6P093 401 aa11.54□□□□□ -0.56
CLIP4-204ENST00000404424 SLC13A5Q86YT5 568 aaPredicted RBP11.54□□□□□ -0.56
CLIP4-204ENST00000404424 C12orf50Q8NA57 414 aaPredicted RBP11.54□□□□□ -0.56
CLIP4-204ENST00000404424 PCDHB18PQ96TA0 734 aa11.54□□□□□ -0.56
CLIP4-204ENST00000404424 PLVAPQ9BX97 442 aa11.54□□□□□ -0.56
CLIP4-204ENST00000404424 TMEM117Q9H0C3 514 aa11.54□□□□□ -0.56
CLIP4-204ENST00000404424 KLC4Q9NSK0 619 aa11.54□□□□□ -0.56
CLIP4-204ENST00000404424 NOCTQ9UK39 431 aaKnown RBP11.54□□□□□ -0.56
CLIP4-204ENST00000404424 GTF3C4Q9UKN8 822 aa11.54□□□□□ -0.56
CLIP4-204ENST00000404424 TRPC6Q9Y210 931 aa11.54□□□□□ -0.56
CLIP4-204ENST00000404424 PASKQ96RG2 1323 aa11.54□□□□□ -0.56
CLIP4-204ENST00000404424 TMEM110-MUSTN1A8MSY1 372 aa11.54□□□□□ -0.56
CLIP4-204ENST00000404424 PHF20L1A8MW92 1017 aa11.54□□□□□ -0.56
CLIP4-204ENST00000404424 ASAP2O43150 1006 aa11.54□□□□□ -0.56
CLIP4-204ENST00000404424 SGPL1O95470 568 aa11.54□□□□□ -0.56
CLIP4-204ENST00000404424 CHN1P15882 459 aa11.54□□□□□ -0.56
CLIP4-204ENST00000404424 CHRNB2P17787 502 aa11.54□□□□□ -0.56
CLIP4-204ENST00000404424 ITGB5P18084 799 aa11.54□□□□□ -0.56
CLIP4-204ENST00000404424 RASA3Q14644 834 aa11.54□□□□□ -0.56
CLIP4-204ENST00000404424 TTC27Q6P3X3 843 aa11.54□□□□□ -0.56
CLIP4-204ENST00000404424 HAUS6Q7Z4H7 955 aa11.54□□□□□ -0.56
CLIP4-204ENST00000404424 CCDC105Q8IYK2 499 aa11.54□□□□□ -0.56
CLIP4-204ENST00000404424 ANKS4BQ8N8V4 417 aa11.54□□□□□ -0.56
CLIP4-204ENST00000404424 ZNF564Q8TBZ8 553 aaPredicted RBP11.54□□□□□ -0.56
CLIP4-204ENST00000404424 IPO4Q8TEX9 1081 aaKnown RBP11.54□□□□□ -0.56
CLIP4-204ENST00000404424 FAM151AQ8WW52 585 aa11.54□□□□□ -0.56
CLIP4-204ENST00000404424 ART4Q93070 314 aa11.54□□□□□ -0.56
CLIP4-204ENST00000404424 ZNF317Q96PQ6 595 aaPredicted RBP11.54□□□□□ -0.56
CLIP4-204ENST00000404424 ROPN1BQ9BZX4 212 aaPredicted RBP11.54□□□□□ -0.56
CLIP4-204ENST00000404424 CCDC134Q9H6E4 229 aa11.54□□□□□ -0.56
CLIP4-204ENST00000404424 ROPN1Q9HAT0 212 aaPredicted RBP11.54□□□□□ -0.56
CLIP4-204ENST00000404424 LRRC4CQ9HCJ2 640 aa11.54□□□□□ -0.56
CLIP4-204ENST00000404424 KCNH7Q9NS40 1196 aa11.54□□□□□ -0.56
CLIP4-204ENST00000404424 SPOPO43791 374 aa11.53□□□□□ -0.56
CLIP4-204ENST00000404424 MMEP08473 750 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms