RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 KDM4CQ9H3R0 1056 aa21.38■■□□□ 1.01
CCDC47-202ENST00000403162 PARVGQ9HBI0 331 aa21.38■■□□□ 1.01
CCDC47-202ENST00000403162 KIAA0391O15091 583 aaKnown RBP21.38■■□□□ 1.01
CCDC47-202ENST00000403162 ASNSP08243 561 aa21.38■■□□□ 1.01
CCDC47-202ENST00000403162 POTEJP0CG39 1038 aa21.38■■□□□ 1.01
CCDC47-202ENST00000403162 HSPA6P17066 643 aa21.38■■□□□ 1.01
CCDC47-202ENST00000403162 PPARDQ03181 441 aa21.38■■□□□ 1.01
CCDC47-202ENST00000403162 ZC2HC1CQ53FD0 456 aaPredicted RBP21.38■■□□□ 1.01
CCDC47-202ENST00000403162 ZDHHC24Q6UX98 284 aa21.38■■□□□ 1.01
CCDC47-202ENST00000403162 CCT6BQ92526 530 aa21.38■■□□□ 1.01
CCDC47-202ENST00000403162 ZKSCAN4Q969J2 545 aaPredicted RBP21.38■■□□□ 1.01
CCDC47-202ENST00000403162 WRNIP1Q96S55 665 aa21.38■■□□□ 1.01
CCDC47-202ENST00000403162 GLIS2Q9BZE0 524 aaPredicted RBP21.38■■□□□ 1.01
CCDC47-202ENST00000403162 PNMA2Q9UL42 364 aa21.38■■□□□ 1.01
CCDC47-202ENST00000403162 COG5Q9UP83 839 aa21.38■■□□□ 1.01
CCDC47-202ENST00000403162 SYNGAP1Q96PV0 1343 aa21.38■■□□□ 1.01
CCDC47-202ENST00000403162 SSC5DA1L4H1 1573 aa21.38■■□□□ 1.01
CCDC47-202ENST00000403162 CTNND1O60716 968 aaKnown RBP21.37■■□□□ 1.01
CCDC47-202ENST00000403162 GBP1P32455 592 aa21.37■■□□□ 1.01
CCDC47-202ENST00000403162 MMP13P45452 471 aa21.37■■□□□ 1.01
CCDC47-202ENST00000403162 SCTRP47872 440 aa21.37■■□□□ 1.01
CCDC47-202ENST00000403162 TCEAL1Q15170 157 aa21.37■■□□□ 1.01
CCDC47-202ENST00000403162 USH1GQ495M9 461 aa21.37■■□□□ 1.01
CCDC47-202ENST00000403162 DENND2CQ68D51 928 aa21.37■■□□□ 1.01
CCDC47-202ENST00000403162 C11orf63Q6NUN7 778 aa21.37■■□□□ 1.01
CCDC47-202ENST00000403162 HS2ST1Q7LGA3 356 aa21.37■■□□□ 1.01
CCDC47-202ENST00000403162 RPAINQ86UA6 219 aa21.37■■□□□ 1.01
CCDC47-202ENST00000403162 ALG3Q92685 438 aa21.37■■□□□ 1.01
CCDC47-202ENST00000403162 GLG1Q92896 1179 aa21.37■■□□□ 1.01
CCDC47-202ENST00000403162 FIZ1Q96SL8 496 aa21.37■■□□□ 1.01
CCDC47-202ENST00000403162 TACO1Q9BSH4 297 aaKnown RBP21.37■■□□□ 1.01
CCDC47-202ENST00000403162 FRMD4BQ9Y2L6 1034 aa21.37■■□□□ 1.01
CCDC47-202ENST00000403162 CCDC169A6NNP5 214 aa21.37■■□□□ 1.01
CCDC47-202ENST00000403162 MIF4GDA9UHW6 222 aaKnown RBP21.37■■□□□ 1.01
CCDC47-202ENST00000403162 BACH1O14867 736 aa21.37■■□□□ 1.01
CCDC47-202ENST00000403162 PHF2O75151 1096 aa21.37■■□□□ 1.01
CCDC47-202ENST00000403162 SHBGP04278 402 aa21.37■■□□□ 1.01
CCDC47-202ENST00000403162 ZNF131P52739 623 aa21.37■■□□□ 1.01
CCDC47-202ENST00000403162 COG2Q14746 738 aa21.37■■□□□ 1.01
CCDC47-202ENST00000403162 STXBP4Q6ZWJ1 553 aa21.37■■□□□ 1.01
CCDC47-202ENST00000403162 FUKQ8N0W3 1084 aa21.37■■□□□ 1.01
CCDC47-202ENST00000403162 GMCL1P1Q8NEA9 526 aa21.37■■□□□ 1.01
CCDC47-202ENST00000403162 CYP2W1Q8TAV3 490 aa21.37■■□□□ 1.01
CCDC47-202ENST00000403162 MDM1Q8TC05 714 aa21.37■■□□□ 1.01
CCDC47-202ENST00000403162 PIGOQ8TEQ8 1089 aa21.37■■□□□ 1.01
CCDC47-202ENST00000403162 GMCL1Q96IK5 515 aa21.37■■□□□ 1.01
CCDC47-202ENST00000403162 ZNF317Q96PQ6 595 aaPredicted RBP21.37■■□□□ 1.01
CCDC47-202ENST00000403162 JPH2Q9BR39 696 aaPredicted RBP21.37■■□□□ 1.01
CCDC47-202ENST00000403162 CD248Q9HCU0 757 aa21.37■■□□□ 1.01
CCDC47-202ENST00000403162 AGPAT3Q9NRZ7 376 aa21.37■■□□□ 1.01
CCDC47-202ENST00000403162 TAS2R14Q9NYV8 317 aa21.37■■□□□ 1.01
CCDC47-202ENST00000403162 IGLV3-22A0A075B6J6 115 aa21.36■■□□□ 1.01
CCDC47-202ENST00000403162 OPLAHO14841 1288 aa21.36■■□□□ 1.01
CCDC47-202ENST00000403162 COPB2P35606 906 aa21.36■■□□□ 1.01
CCDC47-202ENST00000403162 MAP2K2P36507 400 aa21.36■■□□□ 1.01
CCDC47-202ENST00000403162 PTGIRP43119 386 aa21.36■■□□□ 1.01
CCDC47-202ENST00000403162 SNAP25P60880 206 aa21.36■■□□□ 1.01
CCDC47-202ENST00000403162 MYL7Q01449 175 aa21.36■■□□□ 1.01
CCDC47-202ENST00000403162 ZNF211Q13398 564 aaPredicted RBP21.36■■□□□ 1.01
CCDC47-202ENST00000403162 XRCC4Q13426 336 aa21.36■■□□□ 1.01
CCDC47-202ENST00000403162 SYDE2Q5VT97 1194 aa21.36■■□□□ 1.01
CCDC47-202ENST00000403162 ZNF720Q7Z2F6 126 aa21.36■■□□□ 1.01
CCDC47-202ENST00000403162 CROCCP2Q86T23 111 aa21.36■■□□□ 1.01
CCDC47-202ENST00000403162 CCDC50Q8IVM0 306 aa21.36■■□□□ 1.01
CCDC47-202ENST00000403162 CDCA5Q96FF9 252 aa21.36■■□□□ 1.01
CCDC47-202ENST00000403162 SGSM3Q96HU1 749 aa21.36■■□□□ 1.01
CCDC47-202ENST00000403162 ARHGEF10LQ9HCE6 1279 aa21.36■■□□□ 1.01
CCDC47-202ENST00000403162 ZNF112Q9UJU3 913 aa21.36■■□□□ 1.01
CCDC47-202ENST00000403162 RBBP6Q7Z6E9 1792 aaKnown RBP21.36■■□□□ 1.01
CCDC47-202ENST00000403162 PFASO15067 1338 aa21.36■■□□□ 1.01
CCDC47-202ENST00000403162 F5H6K3 240 aa21.36■■□□□ 1.01
CCDC47-202ENST00000403162 SLITRK3O94933 977 aa21.36■■□□□ 1.01
CCDC47-202ENST00000403162 CHRNA3P32297 505 aa21.36■■□□□ 1.01
CCDC47-202ENST00000403162 ZNF76P36508 570 aa21.36■■□□□ 1.01
CCDC47-202ENST00000403162 PLTPP55058 493 aa21.36■■□□□ 1.01
CCDC47-202ENST00000403162 CTTNQ14247 550 aaKnown RBP21.36■■□□□ 1.01
CCDC47-202ENST00000403162 CYB5D1Q6P9G0 228 aa21.36■■□□□ 1.01
CCDC47-202ENST00000403162 ADAT2Q7Z6V5 191 aaKnown RBP21.36■■□□□ 1.01
CCDC47-202ENST00000403162 RNF25Q96BH1 459 aaPredicted RBP21.36■■□□□ 1.01
CCDC47-202ENST00000403162 NMRK2Q9NPI5 230 aa21.36■■□□□ 1.01
CCDC47-202ENST00000403162 GRHL1Q9NZI5 618 aa21.36■■□□□ 1.01
CCDC47-202ENST00000403162 PCYOX1Q9UHG3 505 aa21.36■■□□□ 1.01
CCDC47-202ENST00000403162 PIK3CDO00329 1044 aa21.35■■□□□ 1.01
CCDC47-202ENST00000403162 DNAJC8O75937 253 aaPredicted RBP21.35■■□□□ 1.01
CCDC47-202ENST00000403162 OTOP1Q7RTM1 612 aa21.35■■□□□ 1.01
CCDC47-202ENST00000403162 PALB2Q86YC2 1186 aa21.35■■□□□ 1.01
CCDC47-202ENST00000403162 PARP9Q8IXQ6 854 aa21.35■■□□□ 1.01
CCDC47-202ENST00000403162 FBXO25Q8TCJ0 367 aa21.35■■□□□ 1.01
CCDC47-202ENST00000403162 ATXN2LQ8WWM7 1075 aaKnown RBP21.35■■□□□ 1.01
CCDC47-202ENST00000403162 AGPAT1Q99943 283 aa21.35■■□□□ 1.01
CCDC47-202ENST00000403162 GOPCQ9HD26 462 aa21.35■■□□□ 1.01
CCDC47-202ENST00000403162 ALG6Q9Y672 507 aa21.35■■□□□ 1.01
CCDC47-202ENST00000403162 RPTORQ8N122 1335 aa21.35■■□□□ 1.01
CCDC47-202ENST00000403162 A0A1W2PRG0 241 aa21.34■■□□□ 1.01
CCDC47-202ENST00000403162 TRIM49P0CI25 452 aa21.34■■□□□ 1.01
CCDC47-202ENST00000403162 TRIM49CP0CI26 452 aa21.34■■□□□ 1.01
CCDC47-202ENST00000403162 CHN1P15882 459 aa21.34■■□□□ 1.01
CCDC47-202ENST00000403162 MUTP22033 750 aa21.34■■□□□ 1.01
CCDC47-202ENST00000403162 RDXP35241 583 aaKnown RBP21.34■■□□□ 1.01
CCDC47-202ENST00000403162 CYP2J2P51589 502 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms