RNA–Protein interactions for RNA: ENST00000402738.5

HERC3-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-202ENST00000402738 NLRP9Q7RTR0 991 aa10.38□□□□□ -0.75
HERC3-202ENST00000402738 CYGBQ8WWM9 190 aa10.38□□□□□ -0.75
HERC3-202ENST00000402738 ZNF577Q9BSK1 485 aa10.38□□□□□ -0.75
HERC3-202ENST00000402738 AMNQ9BXJ7 453 aa10.38□□□□□ -0.75
HERC3-202ENST00000402738 LACRTQ9GZZ8 138 aa10.38□□□□□ -0.75
HERC3-202ENST00000402738 KMT5AQ9NQR1 393 aa10.38□□□□□ -0.75
HERC3-202ENST00000402738 ZNF277Q9NRM2 450 aaPredicted RBP10.38□□□□□ -0.75
HERC3-202ENST00000402738 SUN2Q9UH99 717 aa10.38□□□□□ -0.75
HERC3-202ENST00000402738 IPO11Q9UI26 975 aaKnown RBP10.38□□□□□ -0.75
HERC3-202ENST00000402738 PRDM15P57071 1507 aaPredicted RBP10.38□□□□□ -0.75
HERC3-202ENST00000402738 MBD5Q9P267 1494 aa10.38□□□□□ -0.75
HERC3-202ENST00000402738 KCNJ1P48048 391 aa10.38□□□□□ -0.75
HERC3-202ENST00000402738 RAP1GDS1P52306 607 aa10.38□□□□□ -0.75
HERC3-202ENST00000402738 DMPKQ09013 629 aa10.38□□□□□ -0.75
HERC3-202ENST00000402738 P3H1Q32P28 736 aa10.38□□□□□ -0.75
HERC3-202ENST00000402738 MFSD14BQ5SR56 506 aa10.38□□□□□ -0.75
HERC3-202ENST00000402738 CDR2LQ86X02 465 aaPredicted RBP10.38□□□□□ -0.75
HERC3-202ENST00000402738 ZNF280CQ8ND82 737 aa10.38□□□□□ -0.75
HERC3-202ENST00000402738 SH3GL2Q99962 352 aa10.38□□□□□ -0.75
HERC3-202ENST00000402738 METTL5Q9NRN9 209 aaKnown RBP10.38□□□□□ -0.75
HERC3-202ENST00000402738 PSMC3IPQ9P2W1 217 aaPredicted RBP10.38□□□□□ -0.75
HERC3-202ENST00000402738 NXF1Q9UBU9 619 aaKnown RBP10.38□□□□□ -0.75
HERC3-202ENST00000402738 H0Y626 953 aa10.38□□□□□ -0.75
HERC3-202ENST00000402738 AKAP10O43572 662 aa10.38□□□□□ -0.75
HERC3-202ENST00000402738 SERPINI2O75830 405 aa10.38□□□□□ -0.75
HERC3-202ENST00000402738 TRIM16O95361 564 aa10.38□□□□□ -0.75
HERC3-202ENST00000402738 SRGAP2BP0DMP2 458 aa10.38□□□□□ -0.75
HERC3-202ENST00000402738 IL10P22301 178 aa10.38□□□□□ -0.75
HERC3-202ENST00000402738 ARL4AP40617 200 aa10.38□□□□□ -0.75
HERC3-202ENST00000402738 RPS8P62241 208 aaKnown RBP10.38□□□□□ -0.75
HERC3-202ENST00000402738 YWHAHQ04917 246 aaPredicted RBP10.38□□□□□ -0.75
HERC3-202ENST00000402738 ERICH1Q86X53 443 aa10.38□□□□□ -0.75
HERC3-202ENST00000402738 PRCCQ92733 491 aaPredicted RBP10.38□□□□□ -0.75
HERC3-202ENST00000402738 FAM149B1Q96BN6 582 aa10.38□□□□□ -0.75
HERC3-202ENST00000402738 TMA16Q96EY4 203 aaKnown RBP10.38□□□□□ -0.75
HERC3-202ENST00000402738 RMDN2Q96LZ7 410 aa10.38□□□□□ -0.75
HERC3-202ENST00000402738 FAM210AQ96ND0 272 aa10.38□□□□□ -0.75
HERC3-202ENST00000402738 MED10Q9BTT4 135 aa10.38□□□□□ -0.75
HERC3-202ENST00000402738 OSBPL8Q9BZF1 889 aa10.38□□□□□ -0.75
HERC3-202ENST00000402738 ANGPTL3Q9Y5C1 460 aa10.38□□□□□ -0.75
HERC3-202ENST00000402738 PFASO15067 1338 aa10.37□□□□□ -0.75
HERC3-202ENST00000402738 LOC100653049A0A140TA62 436 aa10.37□□□□□ -0.75
HERC3-202ENST00000402738 AIM2O14862 343 aa10.37□□□□□ -0.75
HERC3-202ENST00000402738 KRT34O76011 436 aa10.37□□□□□ -0.75
HERC3-202ENST00000402738 CTDNEP1O95476 244 aa10.37□□□□□ -0.75
HERC3-202ENST00000402738 GLI1P08151 1106 aa10.37□□□□□ -0.75
HERC3-202ENST00000402738 FDPSP14324 419 aaKnown RBP10.37□□□□□ -0.75
HERC3-202ENST00000402738 TCN1P20061 433 aaPredicted RBP10.37□□□□□ -0.75
HERC3-202ENST00000402738 AARSP49588 968 aaKnown RBP eCLIP10.37□□□□□ -0.75
HERC3-202ENST00000402738 RPS6P62753 249 aaKnown RBP10.37□□□□□ -0.75
HERC3-202ENST00000402738 R3HDM1Q15032 1099 aaKnown RBP10.37□□□□□ -0.75
HERC3-202ENST00000402738 KNOP1Q1ED39 458 aaKnown RBP10.37□□□□□ -0.75
HERC3-202ENST00000402738 TBC1D9BQ66K14 1250 aa10.37□□□□□ -0.75
HERC3-202ENST00000402738 TTC13Q8NBP0 860 aa10.37□□□□□ -0.75
HERC3-202ENST00000402738 KCNB2Q92953 911 aa10.37□□□□□ -0.75
HERC3-202ENST00000402738 CAVIN3Q969G5 261 aa10.37□□□□□ -0.75
HERC3-202ENST00000402738 CATSPER2Q96P56 530 aa10.37□□□□□ -0.75
HERC3-202ENST00000402738 SH3GLB2Q9NR46 395 aa10.37□□□□□ -0.75
HERC3-202ENST00000402738 DDX18Q9NVP1 670 aaKnown RBP10.37□□□□□ -0.75
HERC3-202ENST00000402738 UTP6Q9NYH9 597 aaKnown RBP10.37□□□□□ -0.75
HERC3-202ENST00000402738 HEY2Q9UBP5 337 aa10.37□□□□□ -0.75
HERC3-202ENST00000402738 RTCBQ9Y3I0 505 aaKnown RBP10.37□□□□□ -0.75
HERC3-202ENST00000402738 HEY1Q9Y5J3 304 aa10.37□□□□□ -0.75
HERC3-202ENST00000402738 AK9Q5TCS8 1911 aa10.37□□□□□ -0.75
HERC3-202ENST00000402738 NEMP1O14524 444 aa10.37□□□□□ -0.75
HERC3-202ENST00000402738 USP17L8P0C7I0 530 aa10.37□□□□□ -0.75
HERC3-202ENST00000402738 ATP2B4P23634 1241 aa10.37□□□□□ -0.75
HERC3-202ENST00000402738 POLGP54098 1239 aaPredicted RBP10.37□□□□□ -0.75
HERC3-202ENST00000402738 ARMCX6Q7L4S7 300 aa10.37□□□□□ -0.75
HERC3-202ENST00000402738 ZBTB8OSQ8IWT0 167 aa10.37□□□□□ -0.75
HERC3-202ENST00000402738 CPVLQ9H3G5 476 aa10.37□□□□□ -0.75
HERC3-202ENST00000402738 TTC37Q6PGP7 1564 aa10.37□□□□□ -0.75
HERC3-202ENST00000402738 PDS5AQ29RF7 1337 aaKnown RBP10.37□□□□□ -0.75
HERC3-202ENST00000402738 PPP1R3GB7ZBB8 358 aa10.37□□□□□ -0.75
HERC3-202ENST00000402738 F5H423 210 aaPredicted RBP10.37□□□□□ -0.75
HERC3-202ENST00000402738 TRIM49P0CI25 452 aa10.37□□□□□ -0.75
HERC3-202ENST00000402738 TRIM49CP0CI26 452 aa10.37□□□□□ -0.75
HERC3-202ENST00000402738 KCNA6P17658 529 aa10.37□□□□□ -0.75
HERC3-202ENST00000402738 ALDH5A1P51649 535 aaPredicted RBP10.37□□□□□ -0.75
HERC3-202ENST00000402738 USP11P51784 963 aa10.37□□□□□ -0.75
HERC3-202ENST00000402738 GRIN1Q05586 938 aa10.37□□□□□ -0.75
HERC3-202ENST00000402738 STX3Q13277 289 aa10.37□□□□□ -0.75
HERC3-202ENST00000402738 RASGRF1Q13972 1273 aa10.37□□□□□ -0.75
HERC3-202ENST00000402738 DDB1Q16531 1140 aa10.37□□□□□ -0.75
HERC3-202ENST00000402738 KCTD21Q4G0X4 260 aa10.37□□□□□ -0.75
HERC3-202ENST00000402738 PPP6R3Q5H9R7 873 aaPredicted RBP10.37□□□□□ -0.75
HERC3-202ENST00000402738 HDAC7Q8WUI4 952 aa10.37□□□□□ -0.75
HERC3-202ENST00000402738 PBXIP1Q96AQ6 731 aa10.37□□□□□ -0.75
HERC3-202ENST00000402738 ANKRD27Q96NW4 1050 aa10.37□□□□□ -0.75
HERC3-202ENST00000402738 SHCBP1LQ9BZQ2 653 aa10.37□□□□□ -0.75
HERC3-202ENST00000402738 MED14O60244 1454 aa10.37□□□□□ -0.75
HERC3-202ENST00000402738 PLEKHG3A1L390 1219 aa10.37□□□□□ -0.75
HERC3-202ENST00000402738 O00370 1275 aa10.37□□□□□ -0.75
HERC3-202ENST00000402738 CLPTM1O96005 669 aa10.37□□□□□ -0.75
HERC3-202ENST00000402738 ALAS1P13196 640 aa10.37□□□□□ -0.75
HERC3-202ENST00000402738 PHKG2P15735 406 aa10.37□□□□□ -0.75
HERC3-202ENST00000402738 HERVK_113P62684 666 aa10.37□□□□□ -0.75
HERC3-202ENST00000402738 CCDC85BQ15834 202 aaPredicted RBP10.37□□□□□ -0.75
HERC3-202ENST00000402738 TAF12Q16514 161 aa10.37□□□□□ -0.75
HERC3-202ENST00000402738 TRAF7Q6Q0C0 670 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 174.5 ms