RNA–Protein interactions for RNA: ENST00000401730.5

SNRNP70-202, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 3,144 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-202ENST00000401730 LMO3Q8TAP4 145 aa18.34■□□□□ 0.53
SNRNP70-202ENST00000401730 CHURC1Q8WUH1 139 aa18.34■□□□□ 0.53
SNRNP70-202ENST00000401730 RNF25Q96BH1 459 aaPredicted RBP18.34■□□□□ 0.53
SNRNP70-202ENST00000401730 CEP89Q96ST8 783 aa18.34■□□□□ 0.53
SNRNP70-202ENST00000401730 SLITRK6Q9H5Y7 841 aa18.34■□□□□ 0.53
SNRNP70-202ENST00000401730 ZNF70Q9UC06 446 aaPredicted RBP18.34■□□□□ 0.53
SNRNP70-202ENST00000401730 ACSL3O95573 720 aa18.34■□□□□ 0.53
SNRNP70-202ENST00000401730 VIL1P09327 827 aaKnown RBP18.34■□□□□ 0.53
SNRNP70-202ENST00000401730 MMP14P50281 582 aa18.34■□□□□ 0.53
SNRNP70-202ENST00000401730 PRUNE1Q86TP1 453 aa18.34■□□□□ 0.53
SNRNP70-202ENST00000401730 CD302Q8IX05 232 aa18.34■□□□□ 0.53
SNRNP70-202ENST00000401730 PRELID2Q8N945 189 aa18.34■□□□□ 0.53
SNRNP70-202ENST00000401730 ZNF653Q96CK0 615 aa18.34■□□□□ 0.53
SNRNP70-202ENST00000401730 MTFR1LQ9H019 292 aa18.34■□□□□ 0.53
SNRNP70-202ENST00000401730 TMEM117Q9H0C3 514 aa18.34■□□□□ 0.53
SNRNP70-202ENST00000401730 CLDN3O15551 220 aa18.34■□□□□ 0.53
SNRNP70-202ENST00000401730 PMS2P54278 862 aa18.34■□□□□ 0.53
SNRNP70-202ENST00000401730 CCDC137Q6PK04 289 aaKnown RBP18.34■□□□□ 0.53
SNRNP70-202ENST00000401730 BTNL9Q6UXG8 535 aa18.34■□□□□ 0.53
SNRNP70-202ENST00000401730 TAAR1Q96RJ0 339 aa18.34■□□□□ 0.53
SNRNP70-202ENST00000401730 MXRA8Q9BRK3 442 aa18.34■□□□□ 0.53
SNRNP70-202ENST00000401730 NUP85Q9BW27 656 aa18.34■□□□□ 0.53
SNRNP70-202ENST00000401730 HEMGNQ9BXL5 484 aa18.34■□□□□ 0.53
SNRNP70-202ENST00000401730 DMAC2Q9NW81 257 aa18.34■□□□□ 0.53
SNRNP70-202ENST00000401730 FAM107AO95990 144 aa18.33■□□□□ 0.53
SNRNP70-202ENST00000401730 TEX2Q8IWB9 1127 aa18.33■□□□□ 0.53
SNRNP70-202ENST00000401730 LARGE2Q8N3Y3 721 aa18.33■□□□□ 0.53
SNRNP70-202ENST00000401730 OGFOD1Q8N543 542 aa18.33■□□□□ 0.53
SNRNP70-202ENST00000401730 TATDN2Q93075 761 aa18.33■□□□□ 0.53
SNRNP70-202ENST00000401730 ADAM33Q9BZ11 813 aa18.33■□□□□ 0.53
SNRNP70-202ENST00000401730 GTPBP10A4D1E9 387 aaKnown RBP18.33■□□□□ 0.52
SNRNP70-202ENST00000401730 PTENP60484 403 aa18.33■□□□□ 0.52
SNRNP70-202ENST00000401730 POU5F1Q01860 360 aaKnown RBP18.33■□□□□ 0.52
SNRNP70-202ENST00000401730 CETN1Q12798 172 aa18.33■□□□□ 0.52
SNRNP70-202ENST00000401730 DENND2CQ68D51 928 aa18.33■□□□□ 0.52
SNRNP70-202ENST00000401730 XXYLT1Q8NBI6 393 aa18.33■□□□□ 0.52
SNRNP70-202ENST00000401730 CCDC114Q96M63 670 aa18.33■□□□□ 0.52
SNRNP70-202ENST00000401730 KREMEN1Q96MU8 473 aa18.33■□□□□ 0.52
SNRNP70-202ENST00000401730 SCLT1Q96NL6 688 aa18.33■□□□□ 0.52
SNRNP70-202ENST00000401730 PSMD1Q99460 953 aa18.33■□□□□ 0.52
SNRNP70-202ENST00000401730 FAM114A2Q9NRY5 505 aa18.33■□□□□ 0.52
SNRNP70-202ENST00000401730 SLC12A6Q9UHW9 1150 aa18.33■□□□□ 0.52
SNRNP70-202ENST00000401730 PIK3CDO00329 1044 aa18.32■□□□□ 0.52
SNRNP70-202ENST00000401730 HOXA7P31268 230 aaPredicted RBP18.32■□□□□ 0.52
SNRNP70-202ENST00000401730 NF2P35240 595 aa18.32■□□□□ 0.52
SNRNP70-202ENST00000401730 RARRES1P49788 294 aa18.32■□□□□ 0.52
SNRNP70-202ENST00000401730 GPC5P78333 572 aa18.32■□□□□ 0.52
SNRNP70-202ENST00000401730 C1orf220Q5T0J3 134 aa18.32■□□□□ 0.52
SNRNP70-202ENST00000401730 CCDC121Q6ZUS5 278 aa18.32■□□□□ 0.52
SNRNP70-202ENST00000401730 PASD1Q8IV76 773 aa18.32■□□□□ 0.52
SNRNP70-202ENST00000401730 ARFGAP2Q8N6H7 521 aa18.32■□□□□ 0.52
SNRNP70-202ENST00000401730 RAB17Q9H0T7 212 aa18.32■□□□□ 0.52
SNRNP70-202ENST00000401730 VCPKMTQ9H867 229 aa18.32■□□□□ 0.52
SNRNP70-202ENST00000401730 TRPC6Q9Y210 931 aa18.32■□□□□ 0.52
SNRNP70-202ENST00000401730 A0A0A6YYK5 440 aaPredicted RBP18.32■□□□□ 0.52
SNRNP70-202ENST00000401730 MYCNP04198 464 aaPredicted RBP18.32■□□□□ 0.52
SNRNP70-202ENST00000401730 VCAM1P19320 739 aa18.32■□□□□ 0.52
SNRNP70-202ENST00000401730 YWHABP31946 246 aaKnown RBP18.32■□□□□ 0.52
SNRNP70-202ENST00000401730 ZFYVE27Q5T4F4 411 aa18.32■□□□□ 0.52
SNRNP70-202ENST00000401730 TAS1R2Q8TE23 839 aa18.32■□□□□ 0.52
SNRNP70-202ENST00000401730 CD2APQ9Y5K6 639 aa18.32■□□□□ 0.52
SNRNP70-202ENST00000401730 SPDYE2BA6NHP3 402 aa18.32■□□□□ 0.52
SNRNP70-202ENST00000401730 SPDYE6P0CI01 402 aa18.32■□□□□ 0.52
SNRNP70-202ENST00000401730 CHN1P15882 459 aa18.32■□□□□ 0.52
SNRNP70-202ENST00000401730 MTMR1Q13613 665 aa18.32■□□□□ 0.52
SNRNP70-202ENST00000401730 PPP1R7Q15435 360 aa18.32■□□□□ 0.52
SNRNP70-202ENST00000401730 FAM182AQ5T1J6 154 aa18.32■□□□□ 0.52
SNRNP70-202ENST00000401730 DDX23Q9BUQ8 820 aaKnown RBP18.32■□□□□ 0.52
SNRNP70-202ENST00000401730 KIAA0391O15091 583 aaKnown RBP18.31■□□□□ 0.52
SNRNP70-202ENST00000401730 CCDC172P0C7W6 258 aa18.31■□□□□ 0.52
SNRNP70-202ENST00000401730 CHRNB2P17787 502 aa18.31■□□□□ 0.52
SNRNP70-202ENST00000401730 PRAMEF18Q5VWM3 479 aa18.31■□□□□ 0.52
SNRNP70-202ENST00000401730 KIRREL3Q8IZU9 778 aa18.31■□□□□ 0.52
SNRNP70-202ENST00000401730 UBL4BQ8N7F7 174 aa18.31■□□□□ 0.52
SNRNP70-202ENST00000401730 ZNF564Q8TBZ8 553 aaPredicted RBP18.31■□□□□ 0.52
SNRNP70-202ENST00000401730 CPA5Q8WXQ8 436 aa18.31■□□□□ 0.52
SNRNP70-202ENST00000401730 SYT11Q9BT88 431 aa18.31■□□□□ 0.52
SNRNP70-202ENST00000401730 ENTPD3O75355 529 aa18.31■□□□□ 0.52
SNRNP70-202ENST00000401730 GJB6O95452 261 aa18.31■□□□□ 0.52
SNRNP70-202ENST00000401730 VIMP08670 466 aaKnown RBP18.31■□□□□ 0.52
SNRNP70-202ENST00000401730 CREB1P16220 341 aa18.31■□□□□ 0.52
SNRNP70-202ENST00000401730 ZNF131P52739 623 aa18.31■□□□□ 0.52
SNRNP70-202ENST00000401730 MRPS9P82933 396 aaKnown RBP18.31■□□□□ 0.52
SNRNP70-202ENST00000401730 E2F5Q15329 346 aa18.31■□□□□ 0.52
SNRNP70-202ENST00000401730 LONRF1Q17RB8 773 aa18.31■□□□□ 0.52
SNRNP70-202ENST00000401730 HP1BP3Q5SSJ5 553 aaPredicted RBP18.31■□□□□ 0.52
SNRNP70-202ENST00000401730 SEL1L2Q5TEA6 688 aa18.31■□□□□ 0.52
SNRNP70-202ENST00000401730 DUPD1Q68J44 220 aa18.31■□□□□ 0.52
SNRNP70-202ENST00000401730 SEC16BQ96JE7 1060 aa18.31■□□□□ 0.52
SNRNP70-202ENST00000401730 ACCSQ96QU6 501 aa18.31■□□□□ 0.52
SNRNP70-202ENST00000401730 MKNK1Q9BUB5 465 aa18.31■□□□□ 0.52
SNRNP70-202ENST00000401730 CARD9Q9H257 536 aa18.31■□□□□ 0.52
SNRNP70-202ENST00000401730 TBK1Q9UHD2 729 aa18.31■□□□□ 0.52
SNRNP70-202ENST00000401730 SUFUQ9UMX1 484 aa18.31■□□□□ 0.52
SNRNP70-202ENST00000401730 UBR3Q6ZT12 1888 aa18.31■□□□□ 0.52
SNRNP70-202ENST00000401730 CES2O00748 559 aa18.3■□□□□ 0.52
SNRNP70-202ENST00000401730 RGS16O15492 202 aaPredicted RBP18.3■□□□□ 0.52
SNRNP70-202ENST00000401730 HARSP12081 509 aaKnown RBP18.3■□□□□ 0.52
SNRNP70-202ENST00000401730 CDR1P51861 262 aa18.3■□□□□ 0.52
SNRNP70-202ENST00000401730 MTMR3Q13615 1198 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms