RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 MENTQ9BUN1 341 aa4.29□□□□□ -1.72
CLHC1-201ENST00000401408 DDX23Q9BUQ8 820 aaKnown RBP4.29□□□□□ -1.72
CLHC1-201ENST00000401408 UTP14AQ9BVJ6 771 aaKnown RBP4.29□□□□□ -1.72
CLHC1-201ENST00000401408 RABEP2Q9H5N1 569 aa4.29□□□□□ -1.72
CLHC1-201ENST00000401408 VCPKMTQ9H867 229 aa4.29□□□□□ -1.72
CLHC1-201ENST00000401408 WASH6PQ9NQA3 447 aa4.29□□□□□ -1.72
CLHC1-201ENST00000401408 ZNF277Q9NRM2 450 aaPredicted RBP4.29□□□□□ -1.72
CLHC1-201ENST00000401408 DDX18Q9NVP1 670 aaKnown RBP4.29□□□□□ -1.72
CLHC1-201ENST00000401408 ZNF358Q9NW07 568 aa4.29□□□□□ -1.72
CLHC1-201ENST00000401408 MOSPD1Q9UJG1 213 aa4.29□□□□□ -1.72
CLHC1-201ENST00000401408 DENND2AQ9ULE3 1009 aa4.29□□□□□ -1.72
CLHC1-201ENST00000401408 LRFN2Q9ULH4 789 aa4.29□□□□□ -1.72
CLHC1-201ENST00000401408 POLHQ9Y253 713 aa4.29□□□□□ -1.72
CLHC1-201ENST00000401408 COL11A2P13942 1736 aaPredicted RBP4.29□□□□□ -1.72
CLHC1-201ENST00000401408 CACNA1SQ13698 1873 aa4.29□□□□□ -1.72
CLHC1-201ENST00000401408 LTBP3Q9NS15 1303 aa4.29□□□□□ -1.72
CLHC1-201ENST00000401408 PGPEP1LA6NFU8 196 aa4.29□□□□□ -1.72
CLHC1-201ENST00000401408 THAP12O43422 761 aa4.29□□□□□ -1.72
CLHC1-201ENST00000401408 NMT2O60551 498 aa4.29□□□□□ -1.72
CLHC1-201ENST00000401408 PALMO75781 387 aa4.29□□□□□ -1.72
CLHC1-201ENST00000401408 DNAJC8O75937 253 aaPredicted RBP4.29□□□□□ -1.72
CLHC1-201ENST00000401408 CDKL5O76039 1030 aa4.29□□□□□ -1.72
CLHC1-201ENST00000401408 TMEM11P17152 192 aa4.29□□□□□ -1.72
CLHC1-201ENST00000401408 GAP43P17677 238 aa4.29□□□□□ -1.72
CLHC1-201ENST00000401408 TKTL1P51854 596 aa4.29□□□□□ -1.72
CLHC1-201ENST00000401408 CTAG1AP78358 180 aa4.29□□□□□ -1.72
CLHC1-201ENST00000401408 ICA1Q05084 483 aa4.29□□□□□ -1.72
CLHC1-201ENST00000401408 IKQ13123 557 aaPredicted RBP4.29□□□□□ -1.72
CLHC1-201ENST00000401408 SGCGQ13326 291 aa4.29□□□□□ -1.72
CLHC1-201ENST00000401408 NAA25Q14CX7 972 aa4.29□□□□□ -1.72
CLHC1-201ENST00000401408 INAQ16352 499 aa4.29□□□□□ -1.72
CLHC1-201ENST00000401408 HAUS3Q68CZ6 603 aa4.29□□□□□ -1.72
CLHC1-201ENST00000401408 RPUSD3Q6P087 351 aaKnown RBP4.29□□□□□ -1.72
CLHC1-201ENST00000401408 ARMC9Q7Z3E5 817 aa4.29□□□□□ -1.72
CLHC1-201ENST00000401408 CMTR2Q8IYT2 770 aaKnown RBP4.29□□□□□ -1.72
CLHC1-201ENST00000401408 OR8H3Q8N146 312 aa4.29□□□□□ -1.72
CLHC1-201ENST00000401408 LRRC47Q8N1G4 583 aaKnown RBP4.29□□□□□ -1.72
CLHC1-201ENST00000401408 MRPL50Q8N5N7 158 aaKnown RBP4.29□□□□□ -1.72
CLHC1-201ENST00000401408 SPC24Q8NBT2 197 aa4.29□□□□□ -1.72
CLHC1-201ENST00000401408 MOSPD2Q8NHP6 518 aa4.29□□□□□ -1.72
CLHC1-201ENST00000401408 ATP2A3Q93084 1043 aa4.29□□□□□ -1.72
CLHC1-201ENST00000401408 FATE1Q969F0 183 aa4.29□□□□□ -1.72
CLHC1-201ENST00000401408 ZNF845Q96IR2 970 aaPredicted RBP4.29□□□□□ -1.72
CLHC1-201ENST00000401408 VPS39Q96JC1 886 aa4.29□□□□□ -1.72
CLHC1-201ENST00000401408 TIGD1Q96MW7 591 aa4.29□□□□□ -1.72
CLHC1-201ENST00000401408 RUNDC3BQ96NL0 473 aa4.29□□□□□ -1.72
CLHC1-201ENST00000401408 TMEM237Q96Q45 408 aa4.29□□□□□ -1.72
CLHC1-201ENST00000401408 KCNK17Q96T54 332 aa4.29□□□□□ -1.72
CLHC1-201ENST00000401408 YME1L1Q96TA2 773 aa4.29□□□□□ -1.72
CLHC1-201ENST00000401408 NUP88Q99567 741 aaPredicted RBP4.29□□□□□ -1.72
CLHC1-201ENST00000401408 NOL10Q9BSC4 688 aaKnown RBP4.29□□□□□ -1.72
CLHC1-201ENST00000401408 ACAT2Q9BWD1 397 aa4.29□□□□□ -1.72
CLHC1-201ENST00000401408 BCO2Q9BYV7 579 aa4.29□□□□□ -1.72
CLHC1-201ENST00000401408 TAF1DQ9H5J8 278 aaPredicted RBP4.29□□□□□ -1.72
CLHC1-201ENST00000401408 FAM204AQ9H8W3 233 aa4.29□□□□□ -1.72
CLHC1-201ENST00000401408 CERS4Q9HA82 394 aa4.29□□□□□ -1.72
CLHC1-201ENST00000401408 HAUS2Q9NVX0 235 aa4.29□□□□□ -1.72
CLHC1-201ENST00000401408 ZC3H7BQ9UGR2 993 aaKnown RBP4.29□□□□□ -1.72
CLHC1-201ENST00000401408 RASAL2Q9UJF2 1139 aa4.29□□□□□ -1.72
CLHC1-201ENST00000401408 KIF3AQ9Y496 699 aa4.29□□□□□ -1.72
CLHC1-201ENST00000401408 TACC3Q9Y6A5 838 aa4.29□□□□□ -1.72
CLHC1-201ENST00000401408 KTN1Q86UP2 1357 aaKnown RBP4.28□□□□□ -1.72
CLHC1-201ENST00000401408 RBBP6Q7Z6E9 1792 aaKnown RBP4.28□□□□□ -1.72
CLHC1-201ENST00000401408 A0A087X0M5 115 aa4.28□□□□□ -1.72
CLHC1-201ENST00000401408 CYP2D7A0A087X1C5 515 aa4.28□□□□□ -1.72
CLHC1-201ENST00000401408 A0A1B0GX30 115 aa4.28□□□□□ -1.72
CLHC1-201ENST00000401408 HNRNPCL2B2RXH8 293 aa4.28□□□□□ -1.72
CLHC1-201ENST00000401408 SGK1O00141 431 aa4.28□□□□□ -1.72
CLHC1-201ENST00000401408 POLRMTO00411 1230 aaKnown RBP4.28□□□□□ -1.72
CLHC1-201ENST00000401408 TLR3O15455 904 aaKnown RBP4.28□□□□□ -1.72
CLHC1-201ENST00000401408 RIPK2O43353 540 aa4.28□□□□□ -1.72
CLHC1-201ENST00000401408 TXNL1O43396 289 aa4.28□□□□□ -1.72
CLHC1-201ENST00000401408 CA12O43570 354 aa4.28□□□□□ -1.72
CLHC1-201ENST00000401408 CEP104O60308 925 aa4.28□□□□□ -1.72
CLHC1-201ENST00000401408 HNRNPCL1O60812 293 aaKnown RBP4.28□□□□□ -1.72
CLHC1-201ENST00000401408 KINO60870 393 aaKnown RBP4.28□□□□□ -1.72
CLHC1-201ENST00000401408 SRGAP2O75044 1071 aa4.28□□□□□ -1.72
CLHC1-201ENST00000401408 NPTXRO95502 500 aa4.28□□□□□ -1.72
CLHC1-201ENST00000401408 ADCY5O95622 1261 aa4.28□□□□□ -1.72
CLHC1-201ENST00000401408 PLATP00750 562 aa4.28□□□□□ -1.72
CLHC1-201ENST00000401408 MAP2K2P36507 400 aa4.28□□□□□ -1.72
CLHC1-201ENST00000401408 MAP3K10Q02779 954 aa4.28□□□□□ -1.72
CLHC1-201ENST00000401408 DEUP1Q05D60 604 aa4.28□□□□□ -1.72
CLHC1-201ENST00000401408 NMIQ13287 307 aaPredicted RBP4.28□□□□□ -1.72
CLHC1-201ENST00000401408 KIAA0753Q2KHM9 967 aa4.28□□□□□ -1.72
CLHC1-201ENST00000401408 FAM209AQ5JX71 171 aa4.28□□□□□ -1.72
CLHC1-201ENST00000401408 HGSNATQ68CP4 663 aa4.28□□□□□ -1.72
CLHC1-201ENST00000401408 C11orf88Q6PI97 169 aa4.28□□□□□ -1.72
CLHC1-201ENST00000401408 MPRIPQ6WCQ1 1025 aa4.28□□□□□ -1.72
CLHC1-201ENST00000401408 INTS8Q75QN2 995 aaKnown RBP4.28□□□□□ -1.72
CLHC1-201ENST00000401408 LSRQ86X29 649 aaPredicted RBP4.28□□□□□ -1.72
CLHC1-201ENST00000401408 CREG2Q8IUH2 290 aa4.28□□□□□ -1.72
CLHC1-201ENST00000401408 CEP97Q8IW35 865 aa4.28□□□□□ -1.72
CLHC1-201ENST00000401408 UNC45BQ8IWX7 931 aa4.28□□□□□ -1.72
CLHC1-201ENST00000401408 TOR1AIP2Q8NFQ8 470 aa4.28□□□□□ -1.72
CLHC1-201ENST00000401408 NOC3LQ8WTT2 800 aaKnown RBP4.28□□□□□ -1.72
CLHC1-201ENST00000401408 PLD4Q96BZ4 506 aa4.28□□□□□ -1.72
CLHC1-201ENST00000401408 CDC6Q99741 560 aa4.28□□□□□ -1.72
CLHC1-201ENST00000401408 TRIM7Q9C029 511 aa4.28□□□□□ -1.72
CLHC1-201ENST00000401408 RNF38Q9H0F5 515 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms