RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 HES2Q9Y543 173 aa13.32□□□□□ -0.28
LINC00544-201ENST00000400540 CNTNAP2Q9UHC6 1331 aa13.32□□□□□ -0.28
LINC00544-201ENST00000400540 FAM186AA6NE01 2351 aa13.31□□□□□ -0.28
LINC00544-201ENST00000400540 FAM205CA6NFA0 338 aa13.31□□□□□ -0.28
LINC00544-201ENST00000400540 TEX28O15482 410 aa13.31□□□□□ -0.28
LINC00544-201ENST00000400540 CCNT1O60563 726 aaKnown RBP13.31□□□□□ -0.28
LINC00544-201ENST00000400540 TSPAN1O60635 241 aa13.31□□□□□ -0.28
LINC00544-201ENST00000400540 REC8O95072 547 aa13.31□□□□□ -0.28
LINC00544-201ENST00000400540 ALDH2P05091 517 aa13.31□□□□□ -0.28
LINC00544-201ENST00000400540 URODP06132 367 aa13.31□□□□□ -0.28
LINC00544-201ENST00000400540 AOC1P19801 751 aa13.31□□□□□ -0.28
LINC00544-201ENST00000400540 YWHABP31946 246 aaKnown RBP13.31□□□□□ -0.28
LINC00544-201ENST00000400540 MLH1P40692 756 aa13.31□□□□□ -0.28
LINC00544-201ENST00000400540 RFC5P40937 340 aa13.31□□□□□ -0.28
LINC00544-201ENST00000400540 OR1G1P47890 313 aa13.31□□□□□ -0.28
LINC00544-201ENST00000400540 CYP4A11Q02928 519 aa13.31□□□□□ -0.28
LINC00544-201ENST00000400540 CTTNQ14247 550 aaKnown RBP13.31□□□□□ -0.28
LINC00544-201ENST00000400540 NCAPH2Q6IBW4 605 aa13.31□□□□□ -0.28
LINC00544-201ENST00000400540 GALNT17Q6IS24 598 aa13.31□□□□□ -0.28
LINC00544-201ENST00000400540 NEK8Q86SG6 692 aa13.31□□□□□ -0.28
LINC00544-201ENST00000400540 FERMT3Q86UX7 667 aa13.31□□□□□ -0.28
LINC00544-201ENST00000400540 COLGALT2Q8IYK4 626 aa13.31□□□□□ -0.28
LINC00544-201ENST00000400540 RNF168Q8IYW5 571 aaPredicted RBP13.31□□□□□ -0.28
LINC00544-201ENST00000400540 SIX5Q8N196 739 aa13.31□□□□□ -0.28
LINC00544-201ENST00000400540 RSAD2Q8WXG1 361 aa13.31□□□□□ -0.28
LINC00544-201ENST00000400540 ZNF274Q96GC6 653 aaPredicted RBP13.31□□□□□ -0.28
LINC00544-201ENST00000400540 B3GALT6Q96L58 329 aa13.31□□□□□ -0.28
LINC00544-201ENST00000400540 ZFP42Q96MM3 310 aa13.31□□□□□ -0.28
LINC00544-201ENST00000400540 RPS6KC1Q96S38 1066 aa13.31□□□□□ -0.28
LINC00544-201ENST00000400540 GAD1Q99259 594 aa13.31□□□□□ -0.28
LINC00544-201ENST00000400540 XPNPEP1Q9NQW7 623 aa13.31□□□□□ -0.28
LINC00544-201ENST00000400540 IPPQ9Y573 584 aa13.31□□□□□ -0.28
LINC00544-201ENST00000400540 CYP46A1Q9Y6A2 500 aa13.31□□□□□ -0.28
LINC00544-201ENST00000400540 PATJQ8NI35 1801 aa13.31□□□□□ -0.28
LINC00544-201ENST00000400540 RIF1Q5UIP0 2472 aaKnown RBP13.31□□□□□ -0.28
LINC00544-201ENST00000400540 CCDC195A0A1B0GUA6 201 aa13.3□□□□□ -0.28
LINC00544-201ENST00000400540 CCDC194A0A1B0GVG4 234 aa13.3□□□□□ -0.28
LINC00544-201ENST00000400540 ARL5CA6NH57 179 aa13.3□□□□□ -0.28
LINC00544-201ENST00000400540 INPPL1O15357 1258 aa13.3□□□□□ -0.28
LINC00544-201ENST00000400540 RFPL2O75678 378 aa13.3□□□□□ -0.28
LINC00544-201ENST00000400540 EFEMP2O95967 443 aa13.3□□□□□ -0.28
LINC00544-201ENST00000400540 SPATA31D3P0C874 917 aa13.3□□□□□ -0.28
LINC00544-201ENST00000400540 ITGA4P13612 1032 aa13.3□□□□□ -0.28
LINC00544-201ENST00000400540 SCNN1GP51170 649 aa13.3□□□□□ -0.28
LINC00544-201ENST00000400540 SPIRE1Q08AE8 756 aa13.3□□□□□ -0.28
LINC00544-201ENST00000400540 SCRN1Q12765 414 aa13.3□□□□□ -0.28
LINC00544-201ENST00000400540 EPHA7Q15375 998 aa13.3□□□□□ -0.28
LINC00544-201ENST00000400540 XKR9Q5GH70 373 aa13.3□□□□□ -0.28
LINC00544-201ENST00000400540 PPP4R3AQ6IN85 833 aa13.3□□□□□ -0.28
LINC00544-201ENST00000400540 C15orf39Q6ZRI6 1047 aa13.3□□□□□ -0.28
LINC00544-201ENST00000400540 SPATA31D4Q6ZUB0 917 aa13.3□□□□□ -0.28
LINC00544-201ENST00000400540 PIK3AP1Q6ZUJ8 805 aa13.3□□□□□ -0.28
LINC00544-201ENST00000400540 C4orf19Q8IY42 314 aa13.3□□□□□ -0.28
LINC00544-201ENST00000400540 FAM20AQ96MK3 541 aa13.3□□□□□ -0.28
LINC00544-201ENST00000400540 MTRQ99707 1265 aa13.3□□□□□ -0.28
LINC00544-201ENST00000400540 APOL6Q9BWW8 343 aa13.3□□□□□ -0.28
LINC00544-201ENST00000400540 KANSL3Q9P2N6 904 aa13.3□□□□□ -0.28
LINC00544-201ENST00000400540 FBXL21Q9UKT6 434 aa13.3□□□□□ -0.28
LINC00544-201ENST00000400540 DKC1O60832 514 aaKnown RBP eCLIP13.29□□□□□ -0.28
LINC00544-201ENST00000400540 ERLIN2O94905 339 aa13.29□□□□□ -0.28
LINC00544-201ENST00000400540 GLUD1P00367 558 aa13.29□□□□□ -0.28
LINC00544-201ENST00000400540 ADH1AP07327 375 aa13.29□□□□□ -0.28
LINC00544-201ENST00000400540 CFHP08603 1231 aa13.29□□□□□ -0.28
LINC00544-201ENST00000400540 GBP2P32456 591 aaPredicted RBP13.29□□□□□ -0.28
LINC00544-201ENST00000400540 GLUD2P49448 558 aa13.29□□□□□ -0.28
LINC00544-201ENST00000400540 DSC1Q08554 894 aa13.29□□□□□ -0.28
LINC00544-201ENST00000400540 KIAA0319Q5VV43 1072 aa13.29□□□□□ -0.28
LINC00544-201ENST00000400540 CDR2LQ86X02 465 aaPredicted RBP13.29□□□□□ -0.28
LINC00544-201ENST00000400540 GLYCTKQ8IVS8 523 aa13.29□□□□□ -0.28
LINC00544-201ENST00000400540 CCDC105Q8IYK2 499 aa13.29□□□□□ -0.28
LINC00544-201ENST00000400540 ST13P5Q8NFI4 369 aaPredicted RBP13.29□□□□□ -0.28
LINC00544-201ENST00000400540 CMASQ8NFW8 434 aaPredicted RBP13.29□□□□□ -0.28
LINC00544-201ENST00000400540 ASAP3Q8TDY4 903 aa13.29□□□□□ -0.28
LINC00544-201ENST00000400540 TCP11Q8WWU5 503 aa13.29□□□□□ -0.28
LINC00544-201ENST00000400540 ZNF707Q96C28 371 aaPredicted RBP13.29□□□□□ -0.28
LINC00544-201ENST00000400540 MYADMQ96S97 322 aa13.29□□□□□ -0.28
LINC00544-201ENST00000400540 NXF3Q9H4D5 531 aaKnown RBP13.29□□□□□ -0.28
LINC00544-201ENST00000400540 CACNG4Q9UBN1 327 aa13.29□□□□□ -0.28
LINC00544-201ENST00000400540 STK39Q9UEW8 545 aa13.29□□□□□ -0.28
LINC00544-201ENST00000400540 PPME1Q9Y570 386 aa13.29□□□□□ -0.28
LINC00544-201ENST00000400540 CLUHO75153 1309 aa13.29□□□□□ -0.28
LINC00544-201ENST00000400540 NOTCH4Q99466 2003 aa13.29□□□□□ -0.28
LINC00544-201ENST00000400540 KRBA1A5PL33 1030 aa13.28□□□□□ -0.28
LINC00544-201ENST00000400540 INO80B-WBP1J3KQ70 363 aa13.28□□□□□ -0.28
LINC00544-201ENST00000400540 B4GALT5O43286 388 aa13.28□□□□□ -0.28
LINC00544-201ENST00000400540 GAS2O43903 313 aaKnown RBP13.28□□□□□ -0.28
LINC00544-201ENST00000400540 GCFC2P16383 781 aaKnown RBP13.28□□□□□ -0.28
LINC00544-201ENST00000400540 PTENP60484 403 aa13.28□□□□□ -0.28
LINC00544-201ENST00000400540 MBTD1Q05BQ5 628 aa13.28□□□□□ -0.28
LINC00544-201ENST00000400540 CAPSQ13938 189 aa13.28□□□□□ -0.28
LINC00544-201ENST00000400540 ANGPT1Q15389 498 aa13.28□□□□□ -0.28
LINC00544-201ENST00000400540 AMHR2Q16671 573 aa13.28□□□□□ -0.28
LINC00544-201ENST00000400540 NOTUMQ6P988 496 aa13.28□□□□□ -0.28
LINC00544-201ENST00000400540 CPLX2Q6PUV4 134 aaKnown RBP13.28□□□□□ -0.28
LINC00544-201ENST00000400540 POTEGQ6S5H5 508 aa13.28□□□□□ -0.28
LINC00544-201ENST00000400540 PALB2Q86YC2 1186 aa13.28□□□□□ -0.28
LINC00544-201ENST00000400540 EXOC8Q8IYI6 725 aa13.28□□□□□ -0.28
LINC00544-201ENST00000400540 FAM177A1Q8N128 213 aaPredicted RBP13.28□□□□□ -0.28
LINC00544-201ENST00000400540 CNNM3Q8NE01 707 aa13.28□□□□□ -0.28
LINC00544-201ENST00000400540 RABGGTAQ92696 567 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms